The University of Texas Medical Branch
Department of Biochemistry and Molecular Biology Sealy Center for Structural Biology Computational Biology


SDAP Home Page
SDAP Overview

Use SDAP
SDAP All
SDAP Food

SDAP Tools
FAO/WHO Allergenicity Test
FASTA Search in SDAP
Peptide Match
Peptide Similarity
Peptide-Protein PD Index
Aller_ML, Allergen Markup Language
List SDAP

About SDAP
General Information
Manual
FAQ
Publications
Who Are We
Advisory Board

Allergy Links

Our Software Tools
MPACK
FANTOM
GETAREA
NOAH/DIAMOD
MASIA
PCPMer
InterProSurf
EpiSearch

Allergen Databases
WHO/IUIS Allergen Nomenclature database
FARRP Allergen Protein Database (University of Nebraska)
Allergen Database for Food Safety (ADFS)
COMPARE database
ALLFAM (Medical University of Vienna)
Allermatch (Wageninen University)

Protein Databases
PDB
MMDB - Entrez
SWISS-PROT
NCBI - Entrez
PIR

Protein Classification
CATH
CE
FSSP
iProClass
ProtoMap
SCOP
TOPS
VAST

Bioinformatics Servers
@TOME
BLAST @ NCBI
BLAST @ PIR
FASTA @ PIR
Peptide Match @ PIR
ClustalW @ BCM
ClustalW @ EMBL - EBI
ClustalW @ PIR

Bioinformatics Tools
Cn3D
MolMol

Bioinformatics Links
Bioinformatics Links Directory

SDAP - All Allergens
Go to: SDAP All allergens       Go to: SDAP Food allergens
Send a comment to Ovidiu Ivanciuc      Submit new allergen information to SDAP
Last Updated: Nov 1, 2021  
Alphabetical listing of allergens: A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
Access to SDAP is available free of charge for Academic and non-profit use.
Licenses for commercial use can be obtained by contacting W. Braun (webraun@utmb.edu).
Secure access to SDAP is available from https://fermi.utmb.edu/SDAP

Search Results: Peptide Similarity

Query peptide: GGSSYSYGS

NoAllergenLink to NCBI/
PIR/SwissProt
PD Sequence
Similarity
Index
z(PD,min)z(PD,all)Start
Residue
Matching regionEnd
Residue
1Hom s 5 1346344 0.00 6.3551 7.2480 511GGSSYSYGS519
2Pen ch 13 6684758 5.12 3.4233 5.1671 137GTTSYTYDS145
3Pen c 13.0101 4587983 5.12 3.4233 5.1671 137GTTSYTYDS145
4Gal d 6.0101 VIT1_CHICK 5.98 2.9333 4.8193 1369SGSSHSNSS1377
5gal d 6.0101 P87498 5.98 2.9333 4.8193 1369SGSSHSNSS1377
6Api m 8.0101 B2D0J5 6.16 2.8292 4.7454 454GGSTTDYGV462
7Gal d 6.0101 VIT1_CHICK 6.57 2.5942 4.5786 968SGNSFSFGH976
8gal d 6.0101 P87498 6.57 2.5942 4.5786 968SGNSFSFGH976
9Gal d 6.0101 VIT1_CHICK 6.77 2.4813 4.4985 1153SGSSSSSSS1161
10gal d 6.0101 P87498 6.77 2.4813 4.4985 1153SGSSSSSSS1161
11gal d 6.0101 P87498 6.77 2.4813 4.4985 1154GSSSSSSSS1162
12Gal d vitellogenin 63887 6.77 2.4813 4.4985 1281GSSSSSSSS1289
13Gal d vitellogenin 212881 6.77 2.4813 4.4985 1283GSSSSSSSS1291
14Gal d 6.0101 VIT1_CHICK 6.77 2.4813 4.4985 1154GSSSSSSSS1162
15Der p 9.0101 31745576 6.82 2.4492 4.4757 52GGSNASPGD60
16Der p 9.0102 37654735 6.82 2.4492 4.4757 66GGSNASPGD74
17Asp n 25 464385 6.84 2.4420 4.4706 16GASAFSYGA24
18Pen c 32.0101 121584258 6.88 2.4150 4.4514 20GGTTTTVSS28
19Asp f 10 963013 6.91 2.3998 4.4407 350DGSSTCYGG358
20Hom s 5 1346344 6.93 2.3870 4.4315 87AGGSYGFGG95
21Hev b 2 1184668 7.09 2.2976 4.3681 8SGTSSSFPS16
22Asp f 16 3643813 7.10 2.2911 4.3635 330GSGSSNTGS338
23Alt a 7 P42058 7.10 2.2891 4.3620 162GGSPWGAGT170
24Tri r 2.0101 5813790 7.22 2.2225 4.3148 147GGTTYYYDP155
25Asp f 18.0101 2143219 7.24 2.2102 4.3060 442GGGSSNYTD450
26Cur l 4.0101 193507493 7.24 2.2102 4.3060 443GGGSSNYTD451
27Lin u 1 Q8LPD3_LINUS 7.26 2.1977 4.2972 74GGRSYYYNQ82
28Lin u 1.01 Q8LPD3_LINUS 7.26 2.1977 4.2972 74GGRSYYYNQ82
29Asp f 3 664852 7.27 2.1953 4.2955 209STSSSSSGS217
30Asp f 2 P79017 7.27 2.1953 4.2955 269STSSSSSGS277
31Gal d vitellogenin 63887 7.33 2.1585 4.2694 1280NGSSSSSSS1288
32Gal d vitellogenin 212881 7.33 2.1585 4.2694 1282NGSSSSSSS1290
33Asp v 13.0101 294441150 7.35 2.1473 4.2614 258GGYSYAFSN266
34Zan b 2.0102 QYU76046 7.40 2.1202 4.2422 165GGSRRSSGG173
35Gal d 1 P01005 7.41 2.1156 4.2389 179GSDNKTYGN187
36Api m 12.0101 Q868N5 7.43 2.1000 4.2278 372SSSSSSISS380
37Cor a 1.0104 22686 7.52 2.0515 4.1934 111GGSTLKISS119
38Pis v 2.0201 110349084 7.52 2.0492 4.1918 213GGQSWSQSR221
39Asp f 16 3643813 7.58 2.0155 4.1679 352TGSSTSAGA360
40Gal d vitellogenin 212881 7.58 2.0150 4.1676 1230SSSSRSRSS1238
41Gal d vitellogenin 63887 7.58 2.0150 4.1676 1228SSSSRSRSS1236
42Lat c 6.0101 XP_018521723 7.69 1.9554 4.1252 1317GGFQFQYGT1325
43Ole e 11.0101 269996495 7.73 1.9319 4.1086 133GGTAAEYGT141
44Gal d vitellogenin 212881 7.75 1.9180 4.0987 1203SSSSRSSSS1211
45Gal d vitellogenin 63887 7.75 1.9180 4.0987 1201SSSSRSSSS1209
46Gal d vitellogenin 212881 7.75 1.9180 4.0987 1256SSSSRSSSS1264
47gal d 6.0101 P87498 7.75 1.9180 4.0987 1170SSSSRSSSS1178
48Gal d vitellogenin 212881 7.75 1.9180 4.0987 1201SSSSSSRSS1209
49Gal d vitellogenin 63887 7.75 1.9180 4.0987 1199SSSSSSRSS1207
50Gal d 6.0101 VIT1_CHICK 7.75 1.9180 4.0987 1170SSSSRSSSS1178

Histogram for best protein-peptide similarity index
Number of windows: 1698
Average PD: 11.101222
Standard deviation: 1.746816
1 0.5 1
2 1.0 0
3 1.5 0
4 2.0 0
5 2.5 0
6 3.0 0
7 3.5 0
8 4.0 0
9 4.5 0
10 5.0 0
11 5.5 2
12 6.0 2
13 6.5 1
14 7.0 7
15 7.5 14
16 8.0 34
17 8.5 44
18 9.0 63
19 9.5 103
20 10.0 141
21 10.5 271
22 11.0 168
23 11.5 186
24 12.0 186
25 12.5 150
26 13.0 101
27 13.5 57
28 14.0 49
29 14.5 62
30 15.0 30
31 15.5 16
32 16.0 4
33 16.5 3
34 17.0 1
35 17.5 0
36 18.0 1
37 18.5 0
38 19.0 0
39 19.5 0

Histogram for all protein-peptide similarity indices
Number of windows: 400198
Average PD: 17.838032
Standard deviation: 2.461092
1 0.5 1
2 1.0 0
3 1.5 0
4 2.0 0
5 2.5 0
6 3.0 0
7 3.5 0
8 4.0 0
9 4.5 0
10 5.0 0
11 5.5 2
12 6.0 2
13 6.5 1
14 7.0 14
15 7.5 16
16 8.0 106
17 8.5 85
18 9.0 117
19 9.5 223
20 10.0 443
21 10.5 796
22 11.0 1027
23 11.5 1447
24 12.0 2298
25 12.5 3118
26 13.0 4431
27 13.5 5569
28 14.0 7679
29 14.5 10931
30 15.0 13476
31 15.5 16597
32 16.0 19825
33 16.5 23694
34 17.0 26337
35 17.5 29380
36 18.0 31393
37 18.5 31748
38 19.0 32546
39 19.5 30857
40 20.0 27432
41 20.5 23863
42 21.0 19416
43 21.5 14515
44 22.0 9303
45 22.5 5789
46 23.0 3275
47 23.5 1553
48 24.0 579
49 24.5 211
50 25.0 83
51 25.5 11
Query sequence: GGSSYSYGS

SDAP Home Page | Search SDAP | SDAP Manual | SDAP FAQ | Contact  
UTMB | Search | Directories | UTMB Map | News | Employment | Sitemap 
This site published by Ovidiu Ivanciuc
Copyright   2001-2021  The University of Texas Medical Branch. Please review our privacy policy and Internet guidelines.