The University of Texas Medical Branch
Department of Biochemistry and Molecular Biology Sealy Center for Structural Biology Computational Biology


SDAP Home Page
SDAP Overview

Use SDAP
SDAP All
SDAP Food

SDAP Tools
FAO/WHO Allergenicity Test
FASTA Search in SDAP
Peptide Match
Peptide Similarity
Peptide-Protein PD Index
Aller_ML, Allergen Markup Language
List SDAP

About SDAP
General Information
Manual
FAQ
Publications
Who Are We
Advisory Board

Allergy Links

Our Software Tools
MPACK
FANTOM
GETAREA
NOAH/DIAMOD
MASIA
PCPMer
InterProSurf
EpiSearch

Allergen Databases
WHO/IUIS Allergen Nomenclature database
FARRP Allergen Protein Database (University of Nebraska)
Allergen Database for Food Safety (ADFS)
COMPARE database
ALLFAM (Medical University of Vienna)
Allermatch (Wageninen University)

Protein Databases
PDB
MMDB - Entrez
SWISS-PROT
NCBI - Entrez
PIR

Protein Classification
CATH
CE
FSSP
iProClass
ProtoMap
SCOP
TOPS
VAST

Bioinformatics Servers
@TOME
BLAST @ NCBI
BLAST @ PIR
FASTA @ PIR
Peptide Match @ PIR
ClustalW @ BCM
ClustalW @ EMBL - EBI
ClustalW @ PIR

Bioinformatics Tools
Cn3D
MolMol

Bioinformatics Links
Bioinformatics Links Directory

SDAP - All Allergens
Go to: SDAP All allergens       Go to: SDAP Food allergens
Send a comment to Ovidiu Ivanciuc      Submit new allergen information to SDAP
Last Updated: Nov 1, 2021  
Alphabetical listing of allergens: A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
Access to SDAP is available free of charge for Academic and non-profit use.
Licenses for commercial use can be obtained by contacting W. Braun (webraun@utmb.edu).
Secure access to SDAP is available from https://fermi.utmb.edu/SDAP

Search Results: Peptide Similarity

Query peptide: GRGRGDEFS

NoAllergenLink to NCBI/
PIR/SwissProt
PD Sequence
Similarity
Index
z(PD,min)z(PD,all)Start
Residue
Matching regionEnd
Residue
1Pis v 3.0101 133711973 0.00 7.9837 7.2930 54GRGRGDEFS62
2Jug r 2 6580762 6.88 3.2092 4.6320 156GRERGPEAS164
3Jug n 2 31321944 6.88 3.2092 4.6320 44GRERGPEAS52
4Sal s 6.0101 XP_014059932 6.93 3.1798 4.6156 1152PRGRSGEMG1160
5Lat c 6.0201 XP_018553992 6.93 3.1798 4.6156 1151PRGRSGEMG1159
6Sal s 6.0102 XP_014048044 6.93 3.1798 4.6156 1152PRGRSGEMG1160
7Aed a 10.0201 Q17H80_AEDAE 7.04 3.0983 4.5702 158ADGKSDEVS166
8Lep s 1 20387027 7.04 3.0983 4.5702 158ADGKSDEVS166
9Pen c 19 Q92260 7.18 3.0074 4.5195 362GTGKSNKIT370
10Ara h 3 3703107 7.45 2.8193 4.4147 320SRGRGNGIE328
11Ara h 3 O82580 7.45 2.8193 4.4147 317SRGRGNGIE325
12Per a 3.0101 Q25641 7.45 2.8184 4.4142 88ARPRGEPFS96
13Lat c 6.0101 XP_018521723 7.49 2.7887 4.3976 1152PRGRNGEMG1160
14Fel d 3 17939981 7.55 2.7456 4.3736 88GKSEDDELT96
15Gly m 1 1199563 7.64 2.6821 4.3382 155GCGRGWAFS163
16Gly m 1 P22895 7.64 2.6821 4.3382 155GCGRGWAFS163
17Cor a 10 10944737 7.67 2.6625 4.3273 526GTGKSEKIT534
18Der f 28.0101 L7V065_DERFA 7.67 2.6609 4.3264 494GTGKTNKIT502
19Sola t 1 21512 7.75 2.6082 4.2970 259GTGTTSEFD267
20Sola t 1 169500 7.81 2.5636 4.2722 259GTGTNSEFD267
21Sola t 1 21510 7.81 2.5636 4.2722 259GTGTNSEFD267
22Sola t 1 21514 7.81 2.5636 4.2722 259GTGTNSEFD267
23Sola t 1 129641 7.81 2.5636 4.2722 250GTGTNSEFD258
24Asp f 4 O60024 7.95 2.4666 4.2181 181GAAKGDELP189
25Asp f 18.0101 2143219 8.08 2.3765 4.1679 211GNGHGTHCS219
26Pen o 18 12005497 8.08 2.3765 4.1679 210GNGHGTHCS218
27Pen ch 18 7963902 8.08 2.3765 4.1679 211GNGHGTHCS219
28Alt a 15.0101 A0A0F6N3V8_ALTAL 8.08 2.3765 4.1679 183GNGHGTHCS191
29Cur l 4.0101 193507493 8.08 2.3765 4.1679 212GNGHGTHCS220
30Cla h 9.0101 60116876 8.08 2.3765 4.1679 213GNGHGTHCS221
31Fus p 9.0101 A0A0U1Y1N5_GIBIN 8.08 2.3765 4.1679 77GNGHGTHCS85
32Cla c 9.0101 148361511 8.08 2.3765 4.1679 83GNGHGTHCS91
33Cav p 6.0101 S0BDX9_CAVPO 8.12 2.3542 4.1555 15TQGEGDEVV23
34Gal d vitellogenin 212881 8.14 2.3349 4.1447 470SRGREDKMK478
35Gal d vitellogenin 63887 8.14 2.3349 4.1447 470SRGREDKMK478
36Ves v 3.0101 167782086 8.32 2.2150 4.0779 587GRGSSNKGS595
37Pol d 3.0101 XP_015174445 8.32 2.2150 4.0779 586GRGSSNKGS594
38Ory s 1 6069656 8.42 2.1441 4.0384 63PSGMGDDFG71
39Der f 18.0101 27550039 8.51 2.0839 4.0048 107GSTMSDQFS115
40Gly m 7.0101 C6K8D1_SOYBN 8.53 2.0666 3.9952 77GRGKARETH85
41Jug r 4.0101 Q2TPW5 8.56 2.0452 3.9832 124QQGQSREFQ132
42Can f 8.0101 F1PHB6_CANLF 8.57 2.0422 3.9816 88DKSKDDELT96
43Der p 18.0101 CHL18_DERPT 8.57 2.0388 3.9797 107GASMSDQFS115
44Pin p 1 PINP1_PINPI 8.59 2.0260 3.9726 119GEGRGREEE127
45Pin p 1.0101 PINP1_PINPI 8.59 2.0260 3.9726 119GEGRGREEE127
46Lup an 1.0101 169950562 8.61 2.0138 3.9657 78GRSQSEESQ86
47Pin p 1.0101 PINP1_PINPI 8.61 2.0091 3.9631 121GRGREEEEA129
48Pin p 1 PINP1_PINPI 8.61 2.0091 3.9631 121GRGREEEEA129
49Bos d 13.0201 MYL3_BOVIN 8.63 1.9989 3.9574 101GKPKQEELN109
50Ara h 3 O82580 8.70 1.9504 3.9304 319GRGNGIEET327

Histogram for best protein-peptide similarity index
Number of windows: 1698
Average PD: 11.511386
Standard deviation: 1.441862
1 0.5 1
2 1.0 0
3 1.5 0
4 2.0 0
5 2.5 0
6 3.0 0
7 3.5 0
8 4.0 0
9 4.5 0
10 5.0 0
11 5.5 0
12 6.0 0
13 6.5 0
14 7.0 5
15 7.5 7
16 8.0 11
17 8.5 14
18 9.0 47
19 9.5 30
20 10.0 79
21 10.5 151
22 11.0 206
23 11.5 282
24 12.0 287
25 12.5 218
26 13.0 145
27 13.5 96
28 14.0 60
29 14.5 21
30 15.0 14
31 15.5 10
32 16.0 8
33 16.5 3
34 17.0 1
35 17.5 1
36 18.0 0
37 18.5 0
38 19.0 0
39 19.5 0
40 20.0 0
41 20.5 0
42 21.0 0

Histogram for all protein-peptide similarity indices
Number of windows: 400198
Average PD: 18.867316
Standard deviation: 2.587047
1 0.5 1
2 1.0 0
3 1.5 0
4 2.0 0
5 2.5 0
6 3.0 0
7 3.5 0
8 4.0 0
9 4.5 0
10 5.0 0
11 5.5 0
12 6.0 0
13 6.5 0
14 7.0 5
15 7.5 7
16 8.0 11
17 8.5 14
18 9.0 56
19 9.5 39
20 10.0 116
21 10.5 258
22 11.0 409
23 11.5 807
24 12.0 1121
25 12.5 1695
26 13.0 2429
27 13.5 3518
28 14.0 4730
29 14.5 5972
30 15.0 8457
31 15.5 11577
32 16.0 13942
33 16.5 16668
34 17.0 20387
35 17.5 23639
36 18.0 25940
37 18.5 28672
38 19.0 29580
39 19.5 31057
40 20.0 30089
41 20.5 28265
42 21.0 26584
43 21.5 22769
44 22.0 17891
45 22.5 14228
46 23.0 10866
47 23.5 7590
48 24.0 5011
49 24.5 2925
50 25.0 1460
51 25.5 905
52 26.0 360
53 26.5 121
54 27.0 25
Query sequence: GRGRGDEFS

SDAP Home Page | Search SDAP | SDAP Manual | SDAP FAQ | Contact  
UTMB | Search | Directories | UTMB Map | News | Employment | Sitemap 
This site published by Ovidiu Ivanciuc
Copyright   2001-2021  The University of Texas Medical Branch. Please review our privacy policy and Internet guidelines.