The University of Texas Medical Branch
Department of Biochemistry and Molecular Biology Sealy Center for Structural Biology Computational Biology


SDAP Home Page
SDAP Overview

Use SDAP
SDAP All
SDAP Food

SDAP Tools
FAO/WHO Allergenicity Test
FASTA Search in SDAP
Peptide Match
Peptide Similarity
Peptide-Protein PD Index
Aller_ML, Allergen Markup Language
List SDAP

About SDAP
General Information
Manual
FAQ
Publications
Who Are We
Advisory Board

Allergy Links

Our Software Tools
MPACK
FANTOM
GETAREA
NOAH/DIAMOD
MASIA
PCPMer
InterProSurf
EpiSearch

Allergen Databases
WHO/IUIS Allergen Nomenclature database
FARRP Allergen Protein Database (University of Nebraska)
Allergen Database for Food Safety (ADFS)
COMPARE database
ALLFAM (Medical University of Vienna)
Allermatch (Wageninen University)

Protein Databases
PDB
MMDB - Entrez
SWISS-PROT
NCBI - Entrez
PIR

Protein Classification
CATH
CE
FSSP
iProClass
ProtoMap
SCOP
TOPS
VAST

Bioinformatics Servers
@TOME
BLAST @ NCBI
BLAST @ PIR
FASTA @ PIR
Peptide Match @ PIR
ClustalW @ BCM
ClustalW @ EMBL - EBI
ClustalW @ PIR

Bioinformatics Tools
Cn3D
MolMol

Bioinformatics Links
Bioinformatics Links Directory

SDAP - All Allergens
Go to: SDAP All allergens       Go to: SDAP Food allergens
Send a comment to Ovidiu Ivanciuc      Submit new allergen information to SDAP
Last Updated: Nov 1, 2021  
Alphabetical listing of allergens: A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
Access to SDAP is available free of charge for Academic and non-profit use.
Licenses for commercial use can be obtained by contacting W. Braun (webraun@utmb.edu).
Secure access to SDAP is available from https://fermi.utmb.edu/SDAP

Search Results: Peptide Similarity

Query peptide: RGKKGPGGI

NoAllergenLink to NCBI/
PIR/SwissProt
PD Sequence
Similarity
Index
z(PD,min)z(PD,all)Start
Residue
Matching regionEnd
Residue
1Aca f 2 A0A0A0RCW1_VACFA 0.00 3.8857 7.1717 86RGKKGPGGI94
2Lit c 1 15809696 0.00 3.8857 7.1717 84RGKKGPGGI92
3Koc s 2.0101 A0A0A0REA1_BASSC 0.00 3.8857 7.1717 86RGKKGPGGI94
4Lyc e 1 16555787 0.00 3.8857 7.1717 84RGKKGPGGI92
5Cap a 2 16555785 0.00 3.8857 7.1717 84RGKKGPGGI92
6Pro j 2.0101 A0A023W2L7_PROJU 0.00 3.8857 7.1717 86RGKKGPGGI94
7Sola l 1.0101 PROF2_SOLLC 0.00 3.8857 7.1717 84RGKKGPGGI92
8Sal k 4.0101 239916566 0.00 3.8857 7.1717 86RGKKGPGGI94
9Citr l 2.0101 PROF_CITLA 0.61 3.6714 6.9497 84RGKKGPGGV92
10Gly m 3 O65809 0.61 3.6714 6.9497 84RGKKGPGGV92
11Hev b 8.0102 Q9STB6 0.61 3.6714 6.9497 84RGKKGPGGV92
12Hev b 8.0101 O65812 0.61 3.6714 6.9497 84RGKKGPGGV92
13Gly m 3 O65810 0.61 3.6714 6.9497 84RGKKGPGGV92
14Pru p 4.0201 27528312 0.61 3.6714 6.9497 84RGKKGPGGV92
15Cor a 2 Q9AXH4 0.61 3.6714 6.9497 84RGKKGPGGV92
16Che a 2 29465666 0.61 3.6714 6.9497 84RGKKGPGGV92
17Sal k 4.0201 300490499 0.61 3.6714 6.9497 86RGKKGPGGV94
18Cuc m 2 57021110 0.61 3.6714 6.9497 84RGKKGPGGV92
19Ara t 8 Q42449 0.61 3.6714 6.9497 84RGKKGPGGV92
20Act d 9.0101 195249738 0.61 3.6714 6.9497 84RGKKGPGGV92
21Mal d 4 Q9XF41 0.61 3.6714 6.9497 84RGKKGPGGV92
22Hev b 8.0202 Q9M7M9 1.52 3.3490 6.6157 84RGKKGSGGI92
23Ole e 2 O24169 1.52 3.3490 6.6157 87RGKKGSGGI95
24Zea m 12.0101 P35081 1.52 3.3490 6.6157 84RGKKGSGGI92
25Pru av 4 Q9XF39 1.52 3.3490 6.6157 84RGKKGSGGI92
26Hev b 8.0204 Q9LEI8 1.52 3.3490 6.6157 84RGKKGSGGI92
27Ole e 2 O24170 1.52 3.3490 6.6157 87RGKKGSGGI95
28Cit s 2.0101 P84177 1.52 3.3490 6.6157 84RGKKGSGGI92
29Bet v 2 P25816 1.52 3.3490 6.6157 86RGKKGSGGI94
30Ole e 2 O24171 1.52 3.3490 6.6157 87RGKKGSGGI95
31Mer a 1 O49894 1.52 3.3490 6.6157 86RGKKGSGGI94
32Pru p 4.0101 27528310 1.52 3.3490 6.6157 84RGKKGSGGI92
33Pru du 4.0101 24473793 1.52 3.3490 6.6157 84RGKKGSGGI92
34Hev b 8.0203 Q9M7M8 1.52 3.3490 6.6157 84RGKKGSGGI92
35Hev b 8.0201 Q9M7N0 1.52 3.3490 6.6157 84RGKKGSGGI92
36Zea m 12.0102 P35082 1.52 3.3490 6.6157 84RGKKGSGGI92
37Lig v 2.0101 QRN65366 1.52 3.3490 6.6157 87RGKKGSGGI95
38Zea m 12.0103 P35083 1.52 3.3490 6.6157 84RGKKGSGGI92
39Ory s 12.0101 Q9FUD1 1.52 3.3490 6.6157 84RGKKGSGGI92
40Mal d 4 Q9XF42 1.52 3.3490 6.6157 84RGKKGSGGI92
41Pru du 4.0102 24473797 1.52 3.3490 6.6157 84RGKKGSGGI92
42Hor v 12.0101 P52184 1.72 3.2775 6.5417 84RGKKGTGGI92
43Tri a 12.0104 207366247 1.72 3.2775 6.5417 84RGKKGTGGI92
44Tri a 12.0101 P49232 1.72 3.2775 6.5417 84RGKKGTGGI92
45Zea m 12.0104 O22655 1.72 3.2775 6.5417 84RGKKGTGGI92
46Tri a 12.0103 P49234 1.72 3.2775 6.5417 84RGKKGTGGI92
47Ana c 1 14161637 1.72 3.2775 6.5417 84RGKKGTGGI92
48Zea m 12.0105 Q9FR39 1.72 3.2775 6.5417 84RGKKGTGGI92
49Tri a 12.0102 P49233 1.72 3.2775 6.5417 84RGKKGTGGI92
50Dau c 4 18652049 2.13 3.1346 6.3938 87RGKKGSGGV95

Histogram for best protein-peptide similarity index
Number of windows: 1697
Average PD: 11.009387
Standard deviation: 2.833280
1 0.5 8
2 1.0 13
3 1.5 0
4 2.0 28
5 2.5 11
6 3.0 11
7 3.5 2
8 4.0 3
9 4.5 0
10 5.0 0
11 5.5 0
12 6.0 3
13 6.5 2
14 7.0 8
15 7.5 3
16 8.0 155
17 8.5 15
18 9.0 25
19 9.5 51
20 10.0 76
21 10.5 104
22 11.0 156
23 11.5 195
24 12.0 190
25 12.5 146
26 13.0 139
27 13.5 131
28 14.0 87
29 14.5 53
30 15.0 32
31 15.5 27
32 16.0 7
33 16.5 6
34 17.0 4
35 17.5 1
36 18.0 2
37 18.5 0
38 19.0 1
39 19.5 1
40 20.0 0
41 20.5 0

Histogram for all protein-peptide similarity indices
Number of windows: 400056
Average PD: 19.620376
Standard deviation: 2.735823
1 0.5 8
2 1.0 13
3 1.5 0
4 2.0 28
5 2.5 11
6 3.0 11
7 3.5 2
8 4.0 3
9 4.5 0
10 5.0 0
11 5.5 0
12 6.0 5
13 6.5 10
14 7.0 22
15 7.5 18
16 8.0 190
17 8.5 68
18 9.0 104
19 9.5 133
20 10.0 197
21 10.5 296
22 11.0 428
23 11.5 719
24 12.0 949
25 12.5 1177
26 13.0 1723
27 13.5 2200
28 14.0 3148
29 14.5 4184
30 15.0 5628
31 15.5 7708
32 16.0 9866
33 16.5 12071
34 17.0 14870
35 17.5 17609
36 18.0 20687
37 18.5 23367
38 19.0 26230
39 19.5 28330
40 20.0 29948
41 20.5 29967
42 21.0 29004
43 21.5 26789
44 22.0 24802
45 22.5 21034
46 23.0 17124
47 23.5 13800
48 24.0 9454
49 24.5 6911
50 25.0 4370
51 25.5 2522
52 26.0 1426
53 26.5 613
54 27.0 216
55 27.5 58
Query sequence: RGKKGPGGI

SDAP Home Page | Search SDAP | SDAP Manual | SDAP FAQ | Contact  
UTMB | Search | Directories | UTMB Map | News | Employment | Sitemap 
This site published by Ovidiu Ivanciuc
Copyright   2001-2021  The University of Texas Medical Branch. Please review our privacy policy and Internet guidelines.