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SDAP - Structural Database of Allergenic Proteins
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SDAP is a Web server that
integrates a database of allergenic proteins with various bioinformatics
tools for performing structural studies related to allergens and characterization of their
epitopes.
SDAP database:
SDAP computational tools:
- Go! FAO/WHO Allergenicity Test
- Go! Search your protein with FASTA against all SDAP allergens
- Go! Search your epitope (peptide) for exact matches in all SDAP allergens
- Go! Search your epitope (peptide) for similar regions in all SDAP allergens, using our original PD sequence similarity index
- Go! Compute the PD sequence similarity index for two sequences provided by the user
- For any epitope in SDAP, search for exact matches in the PIR (Protein Information Resources) database
- For any epitope in SDAP, search for similar regions in all SDAP allergens, using our original PD sequence similarity index
- For any epitope in SDAP, search for exact matches in all SDAP allergens
- FASTA@SDAP: select an SDAP allergen and find similar sequences from SDAP
- BLAST@ExPASy: select an SDAP allergen and find similar sequences in Swis-Prot and
other databases from the Expert Protein Analysis System (ExPASy) proteomics server
- BLAST@PIR: select an SDAP allergen and find similar sequences in the PIR (Protein Information Resources) database
- FASTA@PIR: select an SDAP allergen and find similar sequences in the PIR (Protein Information Resources) database
- PROSITE@PIR: select an SDAP allergen and find PROSITE patterns at PIR (Protein Information Resources)
SDAP Lists
- Go! SDAP list of allergens with PDB structure(s)
- Go! SDAP list of allergens with with epitopes
- Go! Other SDAP lists of allergens
- Go! SDAP list of allergen Pfam families. (Link to Pfam)
SDAP visualization tools:
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SDAP News (November 2004)
SDAP News (May 2004)
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The SDAP project is supported by funds from the Food and Drug Administration
(FDA-U-002249), the National Institute of Health (NIH-R01-AI064913),
and the US Environmental Protection Agency (EPA-RD-83313701).
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