SDAP Home Page
SDAP Overview
Search SDAP
SDAP All
SDAP Food
SDAP Tools
AllergenAI
FAO/WHO Allergenicity Test
FASTA Search in SDAP
Peptide Match
Peptide Similarity
Peptide-Protein PD Index
Aller_ML, Allergen Markup Language
List SDAP
About SDAP
General Information
Manual
FAQ
Publications
Who Are We
Advisory Board
New Allergen Submission form
Allergy Links
Our Software Tools
MPACK
FANTOM
GETAREA
InterProSurf
EpiSearch
Protein Databases
PDB
MMDB - Entrez
SWISS-PROT
NCBI - Entrez
PIR
Protein Classification
CATH
FSSP
iProClass
ProtoMap
SCOP
VAST
Bioinformatics Servers
BLAST @ NCBI
FASTA @ EMBL-EBI
Peptide Match @ PIR
ClustalW @ EMBL - EBI
|
SDAP 2.0 - Structural Database of Allergenic Proteins
FASTA Similarity Search in the SDAP Database
Find the sequence similarity between your protein and all allergens from the SDAP database by using a FASTA search. Paste or type your protein sequence as a string of single-letter amino acid codes (lower-case amino acid codes will be translated into upper-case amino acid codes). The maximum length of the sequence is 1000; sequences longer than 1000 amino acids will be truncated after the first 1000 amino acids. Besides the codes of the 20 amino acids, acceptable symbols are B (aspartate or asparagine), U (selenocysteine), and X (any amino acid). The symbols Z, *, -, and . are translated into X (FASTA deletes these symbols from its input). Any other input characters (including space and new line) will be deleted.
Enter the name of your sequence
Paste or type your sequence
Search made with FASTA v36.
|