Department of Biochemistry and Molecular Biology

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SDAP - All Allergens

Go to: SDAP All allergens		Go to: SDAP Food allergens
Send a comment to Ovidiu Ivanciuc		Submit new allergen information to SDAP
Last Updated: Nov 1, 2021
Alphabetical listing of allergens: A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
Access to SDAP is available free of charge for Academic and non-profit use. Licenses for commercial use can be obtained by contacting W. Braun (webraun@utmb.edu). Secure access to SDAP is available from https://fermi.utmb.edu/SDAP

Allergen Bra n 2

Translate to AllerML

Allergen	Bra n 2
Type	foods
Species - Systematic Name	Brassica napus
Species - Common Name	rapeseed
Keywords	Polcalcin; Calcium-binding pollen allergen
Class	non-IUIS

Bra n 2 - Protein Sequences

Source	Link to Source	View Sequence	FASTA@SDAP	BLAST@NCBI	BLAST@ExPASy	PROSITE@PIR
SwissProt	Q39406	Go!	Go!	Go!	Go!	Go!
GenBank	1255538	Go!	Go!	Go!	Go!	Go!

FASTA@SDAP: FASTA search against all SDAP allergen sequences performed at SDAP
BLAST@ExPASy: BLAST search performed at the Expert Protein Analysis System (ExPASy) proteomics server of the Swiss Institute of Bioinformatics (SIB)
PROSITE@PIR: PROSITE search performed at PIR - Protein Information Resources

Bra n 2 - Protein Sequence Properties

Protein Sequence	Protease cleavage sites PeptideCutter@ExPASy
Q39406	Go!
1255538	Go!

PeptideCutter@ExPASy: Protease cleavage sites predicted with PeptideCutter from the Expert Protein Analysis System (ExPASy) proteomics server of the Swiss Institute of Bioinformatics (SIB)

Bra n 2 - Protein Similarity, Classification and Clustering

Protein Sequence	Superfamily	InterPro
Q39406	Go!	Go!

Bra n 2 - Protein Models

3D Model	Source	Link to Source	View Sequence	View Alignment	Get Model	Picture	Picture+90	Picture+180	Picture+270	Jmol
Model 76	SwissProt	Q39406	Go!	Go!	Go!	Go!	Go!	Go!	Go!	View!
Model 767	GenBank	1255538	Go!	Go!	Go!	Go!	Go!	Go!	Go!	View!

Bra n 2 - Pfam domains

Sequence	Pfam sequence	Pfam family	Allergens from this Pfam family	Pfam database	Pfam region	First amino acid	Last amino acid
Q39406
	POC2_BRARA	PF00036	Go!	Pfam A	1	9	37
		PF00036: EF hand
	POC2_BRARA	PF00036	Go!	Pfam A	2	44	72
		PF00036: EF hand
1255538
	POC1_ARATH	PF00036	Go!	Pfam A	1	9	37
		PF00036: EF hand
	POC1_ARATH	PF00036	Go!	Pfam A	2	44	72
		PF00036: EF hand

Pfam is a database of multiple sequence alignments and hidden Markov models covering protein domains and families

Inspect MotifMate results for Bra n 2. AutoMotif contains a database of PCPMer motifs for allergens.
MotifMate home page
MotifMate summary
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