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SDAP - All Allergens
| Allergen Cha o 1Translate to AllerML | | | Allergen | Cha o 1 | Type | tree | Species - Systematic Name | Pinales; Chamaecyparis obtusa | Species - Common Name | Japanese cypress | Keywords | pectate lyase
| Class | non-IUIS |
| |
Cha o 1 - Protein Sequences
Source | Link to Source | View Sequence | FASTA@SDAP | BLAST@NCBI | BLAST@ExPASy | PROSITE@PIR | SwissProt | Q96385 | Go! | Go! | Go! | Go! | Go! | FASTA@SDAP: FASTA search against all SDAP allergen sequences performed at SDAP BLAST@ExPASy: BLAST search performed at the Expert Protein Analysis System (ExPASy) proteomics server of the Swiss Institute of Bioinformatics (SIB) PROSITE@PIR: PROSITE search performed at PIR - Protein Information Resources
Cha o 1 - Protein Sequence Properties
Protein Sequence | Protease cleavage sites PeptideCutter@ExPASy | Q96385 | Go! | |
PeptideCutter@ExPASy: Protease cleavage sites predicted with PeptideCutter from the Expert Protein Analysis System (ExPASy) proteomics server of the Swiss Institute of Bioinformatics (SIB)
Cha o 1 - Protein Similarity, Classification and Clustering
Cha o 1 - Protein Models
Cha o 1 - Pfam domains
Sequence | Pfam sequence | Pfam family | Allergens from this Pfam family | Pfam database | Pfam region | First amino acid | Last amino acid | Q96385 | | | | | | | | | MPA1_CHAOB | PF00544 | Go! | Pfam A | 1 | 102 | 289 | | | PF00544: Pectate lyase
| | MPA1_CHAOB | PF00544 | Go! | Pfam A | 1 | 102 | 289 | | | PF00544: Pectate lyase
| Pfam is a database of multiple sequence alignments and hidden Markov models covering protein domains and families
Inspect MotifMate results for Cha o 1. AutoMotif contains a database of PCPMer motifs for allergens. MotifMate home page MotifMate summary Browse MotifMate proteins Browse MotifMate families
Cha o 1 - EpitopesNo | Epitope | Exact Match @SDAP | Peptide Similarity @SDAP | Exact Match @PIR | Position | Type | Description | 1 | DANWDQNRMKLADCAVGFGS | Go! | Go! | Go! | 32-51 | T-cell | subdominant
| 2 | GATRERSLWIIFSKNLNIKL | Go! | Go! | Go! | 82-101 | T-cell | dominant
| 3 | IFSKNLNIKLNMPLYIAGNK | Go! | Go! | Go! | 92-111 | T-cell | subdominant
| 4 | HFFNHHKVMLLGHSDIYSDD | Go! | Go! | Go! | 212-231 | T-cell | subdominant
| 5 | KSMKVTVAFNQFGPNAGQRM | Go! | Go! | Go! | 232-251 | T-cell | dominant
| 6 | PRARYGLIHVANNNYDPWSI | Go! | Go! | Go! | 252-271 | T-cell | subdominant
| 7 | YAIGGSSNPTILSEGNSFTA | Go! | Go! | Go! | 272-291 | T-cell | subdominant
| 8 | SSGKNEGTNIYNNNEAFKVE | Go! | Go! | Go! | 332-351 | T-cell | dominant
| 9 | YNNNEAFKVENGSAAPQLTK | Go! | Go! | Go! | 342-361 | T-cell | dominant
| 10 | NGSAAPQLTKNAGVLTCILS | Go! | Go! | Go! | 352-371 | T-cell | subdominant
| T. Sone, K. Dairiki, K. Morikubo, K. Shimizu, H. Tsunoo, T. Mori, and K. Kino,
Identification of human T cell epitopes in Japanese cypress pollen allergen,
Cha o 1, elucidates the intrinsic mechanism of cross-allergenicity between
Cha o 1 and Cry j 1, the major allergen of Japanese cedar pollen, at the T cell level.
Clin. Exp. Allergy 2005, 35, 664-671.
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