SDAP Home Page
SDAP Overview
SDAP All
SDAP Food
Use SDAP All
Search SDAP All
List SDAP All
SDAP Food
SDAP Tools
FAO/WHO Allergenicity Test
FASTA Search in SDAP
Peptide Match
Peptide Similarity
Peptide-Protein PD Index
Aller_ML, Allergen Markup Language
List SDAP
About SDAP
General Information
Manual
FAQ
Publications
Who Are We
Advisory Board
Allergy Links
Our Software Tools
MPACK
FANTOM
GETAREA
NOAH/DIAMOD
MASIA
PCPMer
InterProSurf
EpiSearch
Protein Databases
PDB
MMDB - Entrez
SWISS-PROT
NCBI - Entrez
PIR
Protein Classification
CATH
CE
FSSP
iProClass
ProtoMap
SCOP
TOPS
VAST
Bioinformatics Servers
@TOME
BLAST @ NCBI
BLAST @ PIR
FASTA @ PIR
Peptide Match @ PIR
ClustalW @ BCM
ClustalW @ EMBL - EBI
ClustalW @ PIR
Bioinformatics Tools
Cn3D
MolMol
Bioinformatics Links
Bioinformatics Links Directory
|
SDAP - All Allergens
Full FASTA alignment
Sequence name: Query sequence: MTFLIQSAFVALAAISAVLCDPVVVPLQKRAPVEEYINTQYVGPVQLGNQ YFLCVFDTSSYTTVIPSASCVSGGCNCANVHKYYSNKPVSNNVASVRILG SGYANGSEAHDYIAVSTLNATNQGFLLADDISNDICSLGADCVIGLGRPK SGRAAFNLPTVMENFVNQDNIANSFSFHHGRYPDGQHRGVLVLGGTIPAY YRGDFTYVPLVDKDTWNFKVDSISVGNEVVATDQLAFVDSSKYVITGPAE EIKKINDRLGCTNKVIGSRTLCVFDCDKLDNVPSVTFTIGGVAFNISSTY HIQQNGDLCYSGFQYSAGKCFHFGDFFMDNYYAKFDGQNKRMGFAKSVEE L
Alignment made with FASTA 3.45 As explained in the FASTA manual, the bit score is equivalent to the bit score reported by BLAST. A 1 bit increase in score corresponds to a 2-fold reduction in expectation, and a 10-bit increase implies 1000-fold lower expectation. Sequences with E values < 0.01 are almost always homologous.
Alignment 1 Sequence 1: Sequence 2: Allergen Per a 2.0101, Sequence: E7BQV5 Sequence identity: 100.00 (351/351) Sequence 1 MTFLIQSAFVALAAISAVLCDPVVVPLQKRAPVEEYINTQYVGPVQLGNQ MTFLIQSAFVALAAISAVLCDPVVVPLQKRAPVEEYINTQYVGPVQLGNQ Sequence 2 MTFLIQSAFVALAAISAVLCDPVVVPLQKRAPVEEYINTQYVGPVQLGNQ
Sequence 1 YFLCVFDTSSYTTVIPSASCVSGGCNCANVHKYYSNKPVSNNVASVRILG YFLCVFDTSSYTTVIPSASCVSGGCNCANVHKYYSNKPVSNNVASVRILG Sequence 2 YFLCVFDTSSYTTVIPSASCVSGGCNCANVHKYYSNKPVSNNVASVRILG
Sequence 1 SGYANGSEAHDYIAVSTLNATNQGFLLADDISNDICSLGADCVIGLGRPK SGYANGSEAHDYIAVSTLNATNQGFLLADDISNDICSLGADCVIGLGRPK Sequence 2 SGYANGSEAHDYIAVSTLNATNQGFLLADDISNDICSLGADCVIGLGRPK
Sequence 1 SGRAAFNLPTVMENFVNQDNIANSFSFHHGRYPDGQHRGVLVLGGTIPAY SGRAAFNLPTVMENFVNQDNIANSFSFHHGRYPDGQHRGVLVLGGTIPAY Sequence 2 SGRAAFNLPTVMENFVNQDNIANSFSFHHGRYPDGQHRGVLVLGGTIPAY
Sequence 1 YRGDFTYVPLVDKDTWNFKVDSISVGNEVVATDQLAFVDSSKYVITGPAE YRGDFTYVPLVDKDTWNFKVDSISVGNEVVATDQLAFVDSSKYVITGPAE Sequence 2 YRGDFTYVPLVDKDTWNFKVDSISVGNEVVATDQLAFVDSSKYVITGPAE
Sequence 1 EIKKINDRLGCTNKVIGSRTLCVFDCDKLDNVPSVTFTIGGVAFNISSTY EIKKINDRLGCTNKVIGSRTLCVFDCDKLDNVPSVTFTIGGVAFNISSTY Sequence 2 EIKKINDRLGCTNKVIGSRTLCVFDCDKLDNVPSVTFTIGGVAFNISSTY
Sequence 1 HIQQNGDLCYSGFQYSAGKCFHFGDFFMDNYYAKFDGQNKRMGFAKSVEE HIQQNGDLCYSGFQYSAGKCFHFGDFFMDNYYAKFDGQNKRMGFAKSVEE Sequence 2 HIQQNGDLCYSGFQYSAGKCFHFGDFFMDNYYAKFDGQNKRMGFAKSVEE
Sequence 1 L L Sequence 2 L
Alignment 2 Sequence 1: Sequence 2: Allergen Bla g 2, Sequence: P54958 Sequence identity: 42.74 (150/351) Sequence 1 MTFLIQSAFVALAAISAVLCDPVVVPLQKRAPVEEYINTQYVGPVQLGNQ M--L---------A----------VPL-K---V---INTQY-G----GNQ Sequence 2 MIGLKLVTVLFAVATITHAAELQRVPLYKLVHV--FINTQYAGITKIGNQ
Sequence 1 YFLCVFDTSSYTTVIPSASCVSGGCNCANVHKYYSNKP--VSNNVASVRI -FL-VFD--S---V--S--CV-G-C-C-N--KY---KP---S-----V-- Sequence 2 NFLTVFDSTSCNVVVASQECVGGACVCPNLQKYEKLKPKYISDGNVQVKF
Sequence 1 LGSGYANGSEAHDYIAVSTLNATNQGFLLADDISNDICSLGADCVIGLGR ---G-A-G----D----S-L----Q---LAD--S---C-L-AD-V-G--- Sequence 2 FDTGSAVGRGIEDSLTISNLTTSQQDIVLADELSQEVCILSADVVVGIAA
Sequence 1 PKSGRAAFNLPTVMENFVNQDNIANSFSFHHGRYPDGQHRGVLVLGGTIP P----A-----TV-ENFV----IA--FS-HH-R--DG-H-G----GG--- Sequence 2 PGCPNA-LKGKTVLENFVEENLIAPVFSIHHARFQDGEHFGEIIFGGSDW
Sequence 1 AYYRGDFTYVPLVDKDTWNFKVDSISVGNEVVA-TDQLAFVDSSKYVITG -Y--G-FTYVPLV--D-W-F--D----G---VA-----A--D-SK--I-G Sequence 2 KYVDGEFTYVPLVGDDSWKFRLDGVKIGDTTVAPAGTQAIIDTSKAIIVG
Sequence 1 PAEEIKKINDRLGCTNKVIGSRTLCVFDCDKLDNVPSVTFTIGGVAFNIS P------IN---GC-------R--C--DC-K----P-VTF-I-G--FNIS Sequence 2 PKAYVNPINEAIGCVVEKTTTRRICKLDCSKIPSLPDVTFVINGRNFNIS
Sequence 1 STYHIQQNGDLCYSGFQYSAGKCFHF--GDFFMDNYYAKFDGQNKRMGFA S-Y-IQQNG-LCYSGFQ---G---HF--GDFF-D-YY--F---NK-MGF- Sequence 2 SQYYIQQNGNLCYSGFQ-PCGHSDHFFIGDFFVDHYYSEFNWENKTMGFG
Sequence 1 KSVEEL -SVE-- Sequence 2 RSVESV
Alignment 3 Sequence 1: Sequence 2: Allergen Aed a 11.0101, Sequence: Q03168 Sequence identity: 29.91 (105/351) Sequence 1 ---------------------------MTFLIQSAFVALAAISAVLCDPV --------------------------------Q--------I-------- Sequence 2 MLIKSIIALVCLAVLAQADFVRVQLHKTESARQHFRNVDTEIKQLRLKYN
Sequence 1 VVPLQKRAPVEEYINTQYVGPVQLGN--QYFLCVFDTSSYTTVIPSASCV -V------P---Y---QY-G----G---Q-F--VFDT-S-----PS--C- Sequence 2 AVSGPVPEPLSNYLDAQYYGAITIGTPPQSFKVVFDTGSSNLWVPSKECS
Sequence 1 SGGCNCANVHKYYSNKPVS--NNVASVRI-LGSGYANGSEAHDYIAVSTL -----C----KY---K------N-----I--GSG---G----D------- Sequence 2 FTNIACLMHNKYNAKKSSTFEKNGTAFHIQYGSGSLSGYLSTDTVGLGGV
Sequence 1 NATNQGFLLA-DDISNDICSLGADCVIGLGRPKSGRAAFNLPTVMENFVN --T-Q-F--A-------------D---GLG---S---------V--N--N Sequence 2 SVTKQTFAEAINEPGLVFVAAKFDGILGLGY--SSISVDGVVPVFYNMFN
Sequence 1 QDNI-ANSFSFHHGRYPDGQHRGVLVLGGTIPAYYRGDFTYVPLVDKDTW Q--I-A--FSF---R-P-----G----GG-----Y-GDFTY-----K--W Sequence 2 QGLIDAPVFSFYLNRDPSAAEGGEIIFGGSDSNKYTGDFTYLSVDRKAYW
Sequence 1 NFKVDSISVGN-EVVATDQLAFVDSSKYVITGPAEEIKKINDRLGCTNKV -FK-DS--VG--E-------A--D-----I-GP--E---IN---G-T--- Sequence 2 QFKMDSVKVGDTEFCNNGCEAIADTGTSLIAGPVSEVTAINKAIGGTPIM
Sequence 1 IGSRTLCVFDCDKLDNVPSVTFTIGGVAFNISSTYHI----QQNGDLCYS -G-------DC------P---F--GG--F------------Q-----C-S Sequence 2 NGEYMV---DCSLIPKLPKISFVLGGKSFDLEGADYVLRVAQMGKTICLS
Sequence 1 GFQY-----SAGKCFHFGDFFMDNYYAKFDGQNKRMGFAKSVEEL GF---------G-----GD-F---YY--FD--N-R-GFA--V--- Sequence 2 GFMGIDIPPPNGPLWILGDVFIGKYYTEFDMGNDRVGFATAV---
Alignment 4 Sequence 1: Sequence 2: Allergen Rhi o 1.0101, Sequence: I1CLC6 Sequence identity: 25.64 (90/351) Sequence 1 ----------------------------------------------MTFL -------------------------------------------------- Sequence 2 MKFFALSLVVSAAFSVFTDAAITKIPIKKVHETATEKLSRYSHTGEYLTQ
Sequence 1 IQSAFVALAAISAVLCDPVVVPLQKRAPVEEYINTQYVGPVQLGN--QYF ---------------------------P---Y-N-QY-G----G---Q-F Sequence 2 KYFNSQRNNQPMETFKLNPDGSANHGVPLSNYLNAQYYGEIEIGTPPQPF
Sequence 1 LCVFDTSSYTTVIPSASCVSGGCNCANVHKYY---SNKPVSNNVASVRI- --VFDT-S-----PS--C-S--C-----HK-Y---S----S-N-----I- Sequence 2 TVVFDTGSSNLWVPSTHCTSIACF---LHKRYDSASSRTYSENGTEFAIQ
Sequence 1 LGSGYANGSEAHDYIAVSTLNATNQGFLLADDISNDICSLGA-DCVIGLG -G-G---G----D---V-------QGF----------------D---GLG Sequence 2 YGTGSLEGFISQDTLSVGGIQVEDQGFAESTKEPGLTFAFAKFDGIFGLG
Sequence 1 RPKSGRAAFNLPTVMENFVNQDNIANS-FSFH-HGRYPDGQHRGVLVLGG -----------P------VN-D------FSF-------D----G-L--GG Sequence 2 YD-TISVKHTIPPFY-HMVNRDLVDEPLFSFWLNDANKDQDNGGELIFGG
Sequence 1 TIPAYYRGDFTYVPLVDKDTWNFKVDSISVGNEVVATDQL-AFVDSSKYV -------GD--------K--W------I--G---V--D---A--D----- Sequence 2 VDEDHFEGDIHWSDVRRKGYWEITMENIKFGDDYVDIDPVGAAIDTGSSL
Sequence 1 ITGPAEEIKKINDRLGCTNKVIGSRTLCVFDCDKLDNVPSVTFTIGGVAF ---P------IN--LG------G-----V-DC-K----P---F---G--F Sequence 2 LVAPTTVAALINKELGAEKNWAGQY---VVDCNKVPSLPEFCFVFNGKDF
Sequence 1 NISSTYHIQQNGDLCYSGFQ-----YSAGKCFHFGDFFMDNYYAKFDGQN --------------C-SGF--------AG-----GD-F----Y---D--N Sequence 2 CLEGKDYVLEVQGQCISGFMGMDIPEPAGPLWIVGDVFLRKFYSVYDLGN
Sequence 1 KRMGFAKSVEEL -R-G-A-S---- Sequence 2 NRVGLAPSK---
Alignment 5 Sequence 1: Sequence 2: Allergen Asp f 10, Sequence: CAA59419 Sequence identity: 21.37 (75/351) Sequence 1 ---------------------------------------------MTFLI -------------------------------------------------- Sequence 2 MVVFSKVTAVVVGLSTIVSAVPVVQPRKGFTINQVARPVTNKKTVNLPAV
Sequence 1 QSAFVALAAISAVLCDPVVVPLQKRAPVEEYINTQYVGPVQLGNQYFLCV -----------------------------E-----Y--PV--G------- Sequence 2 YANALTKYGGTVPDSVKAAASSGSAVTTPEQYDSEYLTPVKVGGTTLNLD
Sequence 1 FDTSSYTTVIPSASCVSGGCNCANVHKYYSNKPVSNNVASVRILGSGY-A FDT-S------S--------------K---N----N--------G-G--A Sequence 2 FDTGSADLWVFSSELSASQSSGHAIYKPSANAQKLNGYTWKIQYGDGSSA
Sequence 1 NGSEAHDYIAVSTLNATNQGFLLADDISND-ICSLGADCVIGLGRPK--- -G----D---V----A--Q----A--IS---------D---GL------- Sequence 2 SGDVYKDTVTVGGVTAQSQAVEAASHISSQFVQDKDNDGLLGLAFSSINT
Sequence 1 -SGRAAFNLPTVMENFVNQDNIANSFSFHHGRYPDGQHRGVLVLGGTIPA -S-R------------------A-----H----P-----G----G----- Sequence 2 VSPRPQTTFFDTVKSQLDSPLFAVTLKYHA---P-----GTYDFGYIDNS
Sequence 1 YYRGDFTYVPLVD--KDTWNFKVDSISVGNEVVATDQLAFVDSSKYVITG ---G--TY---VD-----W-F--D---VGN-------------------- Sequence 2 KFQGELTYTD-VDSSQGFWMFTADGYGVGNGAPNSNSISGIADTGTTLLL
Sequence 1 PAEEIKKINDRLGCTNKVIGSRTLCVFDCDKLDNVPSVTFTIGGVAFNIS ----------R-----K--------VF-C------PS-T--IGG------ Sequence 2 LDDSVVADYYRQVSGAKNSNQYGGYVFPCST--KLPSFTTVIGGYNAVVP
Sequence 1 STY----HIQQNGDLCYSGFQYSAGKCFH-FGDFFMDNYYAKFDGQNKRM --Y------------CY-G-Q---G--F--FGD-F----Y--FD-Q--R- Sequence 2 GEYINYAPVTDGSSTCYGGIQSNSGLGFSIFGDIFLKSQYVVFDSQGPRL
Sequence 1 GFAKSVEEL GFA------ Sequence 2 GFAPQA---
|