SDAP Home Page
SDAP Overview
SDAP All
SDAP Food
Use SDAP All
Search SDAP All
List SDAP All
SDAP Food
SDAP Tools
FAO/WHO Allergenicity Test
FASTA Search in SDAP
Peptide Match
Peptide Similarity
Peptide-Protein PD Index
Aller_ML, Allergen Markup Language
List SDAP
About SDAP
General Information
Manual
FAQ
Publications
Who Are We
Advisory Board
Allergy Links
Our Software Tools
MPACK
FANTOM
GETAREA
NOAH/DIAMOD
MASIA
PCPMer
InterProSurf
EpiSearch
Protein Databases
PDB
MMDB - Entrez
SWISS-PROT
NCBI - Entrez
PIR
Protein Classification
CATH
CE
FSSP
iProClass
ProtoMap
SCOP
TOPS
VAST
Bioinformatics Servers
@TOME
BLAST @ NCBI
BLAST @ PIR
FASTA @ PIR
Peptide Match @ PIR
ClustalW @ BCM
ClustalW @ EMBL - EBI
ClustalW @ PIR
Bioinformatics Tools
Cn3D
MolMol
Bioinformatics Links
Bioinformatics Links Directory
|
SDAP - All Allergens
Full FASTA alignment
Sequence name: Query sequence: MTKVCSFVAVMLVMILVCDQFGANEAATCSASQLSPCLGAIQGGTAPSQD CCARLKNQQPCICGFMKDPNLRQYVNSPNARKVAGQCGVSIPSC
Alignment made with FASTA 3.45 As explained in the FASTA manual, the bit score is equivalent to the bit score reported by BLAST. A 1 bit increase in score corresponds to a 2-fold reduction in expectation, and a 10-bit increase implies 1000-fold lower expectation. Sequences with E values < 0.01 are almost always homologous.
Alignment 1 Sequence 1: Sequence 2: Allergen Sola l 6.0101, Sequence: A0A3Q7F7X3 Sequence identity: 100.00 (94/94) Sequence 1 MTKVCSFVAVMLVMILVCDQFGANEAATCSASQLSPCLGAIQGGTAPSQD MTKVCSFVAVMLVMILVCDQFGANEAATCSASQLSPCLGAIQGGTAPSQD Sequence 2 MTKVCSFVAVMLVMILVCDQFGANEAATCSASQLSPCLGAIQGGTAPSQD
Sequence 1 CCARLKNQQPCICGFMKDPNLRQYVNSPNARKVAGQCGVSIPSC CCARLKNQQPCICGFMKDPNLRQYVNSPNARKVAGQCGVSIPSC Sequence 2 CCARLKNQQPCICGFMKDPNLRQYVNSPNARKVAGQCGVSIPSC
Alignment 2 Sequence 1: Sequence 2: Allergen Jug r 8.0101, Sequence: XP_018816661 Sequence identity: 48.94 (46/94) Sequence 1 MTKVCS--FVAVMLVMILVCDQFGANEAATCSASQLSPCLGAIQGGTAPS M-KVC------V--V--L--------EA-TC----LSPCL-AI-----PS Sequence 2 MKKVCCVLLCVVVAVAVLLSEAPLVAEAVTCNYTELSPCLAAIVSPAKPS
Sequence 1 QDCCARLKNQQPCICGFMKDPNLRQYVNSPNARKVAGQCGVSIPSC --CC--L--Q-PC-C---K-PNL-QY-NSP-A-KVA--CGVS-P-C Sequence 2 ATCCQKLREQKPCLCVYYKNPNLKQYINSPGAKKVASSCGVSLPKC
Alignment 3 Sequence 1: Sequence 2: Allergen Jug r 8.0201, Sequence: XP_018847114 Sequence identity: 43.62 (41/94) Sequence 1 MTKVCSFVAVMLVMILVCDQFGANEAATCSASQLSPCLGAIQGGTAPSQD -----S--AV-----L---------A-TC---QLSPC-GAI-----PS-- Sequence 2 --MKASYIAVCTLLVLLLAKTEVTMAVTCNPTQLSPCVGAITSSNPPSSL
Sequence 1 CCARLKNQQPCICGFMKDPNLRQYVNSPNARKVAGQCGVSIPSC CC---K-Q-PC-C---K-PNL---V-SPNARKVA--CG---P-C Sequence 2 CCSKIKEQKPCLCQYLKNPNLKKFVDSPNARKVANTCGTPFPKC
Alignment 4 Sequence 1: Sequence 2: Allergen Ara h 16.0101, Sequence: A0A509ZX51 Sequence identity: 42.55 (40/94) Sequence 1 MTKVCSFVAVMLVMILVCDQFGANEAATCSASQLSPCLGAIQGGTAPSQD ---------------------------TC----LSPCLGAI-GG--PS-- Sequence 2 --------------------------VTCTPTELSPCLGAITGGSPPSSV
Sequence 1 CCARLKNQQPCICGFMKDPNLRQYVNSPNARKVAGQCGVSIPSC CC--L--Q-PC-C---K-P-LR-YVNSP-AR-VA--CGV--PSC Sequence 2 CCQKLRAQKPCLCNYIKNPALRTYVNSPGARRVASSCGVPLPSC
|