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Department of Biochemistry and Molecular Biology Sealy Center for Structural Biology Computational Biology


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                SDAP 2.0 - Structural Database of Allergenic Proteins
Go to: SDAP All allergens       Go to: SDAP Food allergens
Send a comment to Werner Braun      Submit new allergen information to SDAP
  
Alphabetical listing of allergens: A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

Access to SDAP is available free of charge for Academic and non-profit use.< Licenses for commercial use can be obtained by contacting W. Braun (webraun@utmb.edu). Secure access to SDAP is available from https://fermi.utmb.edu/SDAP


Input Sequence

MSDKPSELAVQKLVLFAVKGTATSTHNTVRPLILLDELGVPHEIYVVDRVSAPWFTEINP
HRMVPVILEKSPDGRDTLRAWESTSTLMYIADAYDKDGTFGGRNVQESSDINNWLTLHTA
ALGPTAKYWLYFYKLHPEKLPKTIEKLRSNITVQYDILERRLNEPGQQYLAWLNEKFKRS
SYNRRHCYASLCYEKYRRVVRAGVKVAQTARVVCPYGGDTRRGVWPARKST
Sequence Info Allergen Name Length Opt Bits Score E Value
Q6R4B4 Alt a 13.0101 231 1559 362.1 8.6e-102
AEV23867 Per a 5.0102 216 128 36.0 0.0012
AUW37958 Per a 5.0101 216 126 35.5 0.0017
Please note: Alignment made with FASTA version 36.3.8. As explained in the FASTA manual, the bit score is equivalent to the bit score reported by BLAST. A 1 bit increase in score corresponds to a 2-fold reduction in expectation, and a 10-bit increase implies 1000-fold lower expectation. Sequences with E values < 0.01 are almost always homologous. All FASTA search sequence alignment are printed in Blast format where Query is input sequence, and Sbjct is sequence found in the database.

Sequence Alignment: 1. Allergen Name: Alt a 13.0101 Sequence ID: Q6R4B4

 Score = 362.1 bits 1559,  Expect = 9e-102
 Identities = 231/231 100%, Positives = 231/231 100%, Gaps = 0/231 0%
Query  1    MSDKPSELAVQKLVLFAVKGTATSTHNTVRPLILLDELGVPHEIYVVDRVSAPWFTEINP 60
            MSDKPSELAVQKLVLFAVKGTATSTHNTVRPLILLDELGVPHEIYVVDRVSAPWFTEINP
Sbjct  1    MSDKPSELAVQKLVLFAVKGTATSTHNTVRPLILLDELGVPHEIYVVDRVSAPWFTEINP 60
Query  61   HRMVPVILEKSPDGRDTLRAWESTSTLMYIADAYDKDGTFGGRNVQESSDINNWLTLHTA 120
            HRMVPVILEKSPDGRDTLRAWESTSTLMYIADAYDKDGTFGGRNVQESSDINNWLTLHTA
Sbjct  61   HRMVPVILEKSPDGRDTLRAWESTSTLMYIADAYDKDGTFGGRNVQESSDINNWLTLHTA 120
Query  121  ALGPTAKYWLYFYKLHPEKLPKTIEKLRSNITVQYDILERRLNEPGQQYLAWLNEKFKRS 180
            ALGPTAKYWLYFYKLHPEKLPKTIEKLRSNITVQYDILERRLNEPGQQYLAWLNEKFKRS
Sbjct  121  ALGPTAKYWLYFYKLHPEKLPKTIEKLRSNITVQYDILERRLNEPGQQYLAWLNEKFKRS 180
Query  181  SYNRRHCYASLCYEKYRRVVRAGVKVAQTARVVCPYGGDTRRGVWPARKST 231
            SYNRRHCYASLCYEKYRRVVRAGVKVAQTARVVCPYGGDTRRGVWPARKST
Sbjct  181  SYNRRHCYASLCYEKYRRVVRAGVKVAQTARVVCPYGGDTRRGVWPARKST 231

Sequence Alignment: 2. Allergen Name: Per a 5.0102 Sequence ID: AEV23867

 Score = 36.0 bits 128,  Expect = 0.001
 Identities = 27/108 25%, Positives = 61/108 56%, Gaps = 11/108 10%
Query  53   PWFTEINPHRMVPVILEKSPDGRDTLRAWESTSTLMYIADAYDKDGTFGGRNVQESSDIN 112
            P F ++NP+  +P +   + +G   +  WES + L Y+AD Y KD ++  ++ ++ + ++
Sbjct  43   PEFLKMNPQHTIPTL---NDNG---FCLWESRAILSYLADQYGKDDSLYPKDAKKRALVD 96
Query  113  NWLTLHTAALGPTAKYWLYFYKLHPEKLPKTIEKLRSNITVQYDILERRLNEPGQQYLA 171
              L +    L    ++  Y+Y ++  K     EK++  +   ++ L + L    Q+++A
Sbjct  97   QRLYFDIGTL--YHRFGEYYYPIYFAKQAADPEKMKK-LEEAFEFLNKFLE--SQEFVA 150

Sequence Alignment: 3. Allergen Name: Per a 5.0101 Sequence ID: AUW37958

 Score = 35.5 bits 126,  Expect = 0.002
 Identities = 27/108 25%, Positives = 61/108 56%, Gaps = 11/108 10%
Query  53   PWFTEINPHRMVPVILEKSPDGRDTLRAWESTSTLMYIADAYDKDGTFGGRNVQESSDIN 112
            P F ++NP+  +P +   + +G   +  WES + L Y+AD Y KD ++  ++ ++ + ++
Sbjct  43   PEFLKMNPQHTIPTL---NDNG---FCLWESRAILSYLADQYGKDDSLYPKDAKKRALVD 96
Query  113  NWLTLHTAALGPTAKYWLYFYKLHPEKLPKTIEKLRSNITVQYDILERRLNEPGQQYLA 171
              L +    L    ++  Y+Y ++  K     EK++  +   ++ L + L    Q+++A
Sbjct  97   QRLYFDIRTL--YHRFGEYYYPIYFAKQAADPEKMKK-LEEAFEFLNKFLE--SQEFVA 150

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