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                SDAP 2.0 - Structural Database of Allergenic Proteins
Go to: SDAP All allergens       Go to: SDAP Food allergens
Send a comment to Werner Braun      Submit new allergen information to SDAP
  
Alphabetical listing of allergens: A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

Access to SDAP is available free of charge for Academic and non-profit use.< Licenses for commercial use can be obtained by contacting W. Braun (webraun@utmb.edu). Secure access to SDAP is available from https://fermi.utmb.edu/SDAP

Allergen Info Description
Allergen ID 299
Allergen Scientific Name Api g 1
Allergen Species - Systematic Name Apium graveolens
Allergen Species - Common Name celery
Allergen Common source foods
Allergen Common name
Allergen Keywords homolog: Bet v 1; homolog: pathogenesis related protein PR10
Allergen IUIS (Yes=1, No=0) 1

Api g 1 : There are iso allergen in the table! Click on each iso-allergen for more information.

ID Allergen Name
1 Api g 1.0101
2 Api g 1.0201
Api g 1 - References
ID Reference
Pubmed ID: 12943529
Neudecker P, Lehmann K, Nerkamp J, Haase T, Wangorsch A, Fotisch K, Hoffmann S, Rosch P, Vieths S, Scheurer S, Comment in: Biochem J. 2003 Nov 15;376(Pt 1):e1-2. Mutational epitope analysis of Pru av 1 and Api g 1, the major allergens of cherry (Prunus avium) and celery (Apium graveolens): correlating IgE reactivity with three-dimensional structure. Biochem J. 2003 Nov 15;376(Pt 1):97-107.
Pubmed ID: 10878490
Hoffmann-Sommergruber K, Ferris R, Pec M, Radauer C, O'Riordain G, Laimer Da Camara Machado M, Scheiner O, Breiteneder H. Characterization of api g 1.0201, a new member of the Api g 1 family of celery allergens. Int Arch Allergy Immunol. 2000 Jun;122(2):115-23.
Api g 1 - Protein Sequences
Source Link to source
SwissProt P49372
Api g 1 - PDB Structure
PDB Id PDB Name PDB Entry Deposition Date Experiment Type Observation
299 196 2BK0 08-FEB-05 X-ray diffraction resolution 2.9 A
2BK0.pdb


Api g 1 - Sequence Search :
Sequence Header Sequence
Api g 1
SDAP Sequence ID: 27
SDAP Allergen ID: 299
MGVQTHVLELTSSVSAEKIFQGFVIDVDTVLPKAAPGAYKSVEIKGDGGPGTLKIITLPDGGPITTMTLRIDGVNKEALTFDYSVIDGDILLGFIESIENHVVLVPTADGGSICKTTAIFHTKGDAVVPEENIKYANEQNTALFKALEAYLIAN
View 3D Structure Click here to view 3D model structure of allergen
Fasta Search in SDAP
Blast Swissprot database search at NCBI
Blast PDB database search at NCBI
Blast NR database search at NCBI
Api g 1 - Statistics from Alphafold ( SI is sequence id, Best template format: PDB_ChainID)
Allergen Name pLDDT Score pTM Score Best PDB template %Seq ID Align length Seq length Query Range Sequence Range E-Value Bit Score Download Model
Api g 1 97.1 0.88 2BK0_A 100 154 154 1 - 154 1 - 154 0 309 Download (SI: 27)
Api g 1 - Alphafold Theoretical Model Structure
Model Structure
27_relaxed_rank_1_model_4.pdb


Coverage Plddt
Api g 1 - Protein Sequence Properties!
Protein Sequence Protease cleavage sites PeptideCutter at ExPASy
P49372 Click here to process the data
Api g 1 - PFAM Information
SeqID Aller ID AlnS AlnE EnvS EnvE PFAM ID Family Type Clan Description
27 299 1 153 1 154 PF00407 Bet_v_1 Domain CL0209 Pathogenesis-related protein Bet v 1 family
Where: AlnS= Alignment start position, AlnE= Alignment end position, EnvS= Envelope start position, EnvE= Envelope end position.

List of B-cell epitopes predicted by BepiPred method using a window size of 9 amino acids

Cleck here for epitopes predicted by BepiPred method
Api g 1 - Epitope Information from published data
No. Position Epitope Sequence Epitope Type View epitope Search epitope in SDAP PD search in SDAP Cross-React search
No epitope information found!
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