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Department of Biochemistry and Molecular Biology Sealy Center for Structural Biology Computational Biology



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                SDAP 2.0 - Structural Database of Allergenic Proteins
Go to: SDAP All allergens       Go to: SDAP Food allergens
Send a comment to Werner Braun      Submit new allergen information to SDAP
  
Alphabetical listing of allergens: A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
Access to SDAP is available free of charge for Academic and non-profit use.
Licenses for commercial use can be obtained by contacting W. Braun (webraun@utmb.edu).
Secure access to SDAP is available from https://fermi.utmb.edu/SDAP
Allergen Info Description
Allergen ID 346
Allergen Scientific Name Asc s 1
Allergen Species - Systematic Name Ascaris suum
Allergen Species - Common Name worm
Allergen Common source foods
Allergen Common name
Allergen Keywords ABA-1 polyprotein
Allergen IUIS (Yes=1, No=0) 1
ID Allergen Name
Asc s 1 - References
ID Reference
Pubmed ID: 2335378
Christie JF, Dunbar B, Davidson I, Kennedy MW. N-terminal amino acid sequence identity between a major allergen of Ascaris lumbricoides and Ascaris suum, and MHC-restricted IgE responses to it. Immunology. 1990 Apr;69(4):596-602.
Asc s 1 - Protein Sequences
Source Link to source
GenBank 2970628
Asc s 1 - PDB Structure
PDB Id PDB Name PDB Entry Deposition Date Experiment Type Observation
346 271 2XV9 2010-10-25 Solution NMR
2XV9.pdb


Asc s 1 - Sequence Search :
Sequence Header Sequence
Asc s 1
SDAP Sequence ID: 530
SDAP Allergen ID: 346
TMEHYLKTYLSWLTEEQKEKLKEMKEAGKTKAEIQHEVMHYYDQLHGEEKQQATEKLKVGCKMLLKGIIGEEKVVELRNMKEAGADIQELQQKVEKMLSEVTDEKQKEKVHEYGPACKKIFGATTLQHHRRRRHHFTLESSLDTHLKWLSQEQKDELLKMKKDGKTKKELEAKILHYYDELEGDAKKEATEHLKGGCGEILKHVVGEEKAAELKNLKDSGASKEELKAKVEEALHAVTDEEKKQYIADFGPACKKIYGVHTSRRRRHHFTLESSLDTHLKWLSQEQKDELLKMKKDGKAKKELEAKILHYYDELEGDAKKEATEHLKGGCAEILKHVVGEEKAAELKNLKDSGASKEELKAKVEEALHAVTDEEKKQYIADFGPACKKIYGVHTSRRRRHHFTLESSLDTHLKWLSQEQKDELLKMKKDGKTKKDLQAKILHYYDELEGDAKKEATEHLKDGCREILKHVVGEEKEAELKKLKDSGASKEEVKAKVEEALHAVTDEEKKQYIADFGPACKKIFGAAHTSRRRRHHFTLESSLDTHLKWLSQEQKDELLKMKKDGKAKKELEAKILHYYDELEGDAKKEATEHLKGGCREILKHVVGEEKAAELKNLKDSGASKEELKAKVEEALHAVTDEEKKQYIADFGPACKKIYGVHTSRRRRHHFTLESSLDTHLKWLSQEQKDELLKMKKDGKAKKELEAKILHYYDELEGDAKKEATEHLKGGCREILKHVVGEEKAAELKNLKDSGASKEELKAKVEEALHAVTDEEKKQYIADFGPACKKIYGVHTSRRRRHHFTLESSLDTHLKWLSQEQKDELLKMKKDGKAKKELEAKILHYYDELEGDAKKEATEHLKGGCREILKHVVGEEKAAELKNLKDSGASKEELKAKVEEALHAVTDEEKKQYIADFGPACKKIYGVHTSRRRRHHFTLESSLDTHLKWLSQEQKDELLKMKKDGKAKKELEAKILHYYDELEGDAKKEATEHLKGGCREILKHVVGEEKAAELKNLKDSGASKEELKAKVEEALHAVTDEEKKQYIADFGPACKKIYGVHTSRRRRHHFTLESSLDTHLKWLSQEQKDELLKMKKD
View 3D Structure Click here to view 3D model structure of allergen
Fasta Search in SDAP
Blast Swissprot database search at NCBI
Blast PDB database search at NCBI
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Asc s 1 - Protein Sequence Properties!
Protein Sequence Protease cleavage sites PeptideCutter at ExPASy
2970628 Click here to process the data
Asc s 1 - PFAM Information
SeqID Aller ID AlnS AlnE EnvS EnvE PFAM ID Family Type Clan Description
530 346 2 121 1 121 PF16469 NPA Domain No_clan Nematode polyprotein allergen ABA-1
530 346 138 257 135 257 PF16469 NPA Domain No_clan Nematode polyprotein allergen ABA-1
530 346 271 390 268 390 PF16469 NPA Domain No_clan Nematode polyprotein allergen ABA-1
530 346 404 523 401 523 PF16469 NPA Domain No_clan Nematode polyprotein allergen ABA-1
530 346 538 657 535 657 PF16469 NPA Domain No_clan Nematode polyprotein allergen ABA-1
530 346 671 790 668 790 PF16469 NPA Domain No_clan Nematode polyprotein allergen ABA-1
530 346 804 923 801 923 PF16469 NPA Domain No_clan Nematode polyprotein allergen ABA-1
530 346 937 1056 934 1056 PF16469 NPA Domain No_clan Nematode polyprotein allergen ABA-1
Where: AlnS= Alignment start position, AlnE= Alignment end position, EnvS= Envelope start position, EnvE= Envelope end position.

List of B-cell epitopes predicted by BepiPred method using a window size of 9 amino acids

Cleck here for epitopes predicted by BepiPred method
Asc s 1 - Epitope Information from published data
No. Position Epitope Sequence Epitope Type View epitope Search epitope in SDAP PD search in SDAP Cross-React search
No epitope information found!
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