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                SDAP 2.0 - Structural Database of Allergenic Proteins
Go to: SDAP All allergens       Go to: SDAP Food allergens
Send a comment to Werner Braun      Submit new allergen information to SDAP
  
Alphabetical listing of allergens: A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

Access to SDAP is available free of charge for Academic and non-profit use.< Licenses for commercial use can be obtained by contacting W. Braun (webraun@utmb.edu). Secure access to SDAP is available from https://fermi.utmb.edu/SDAP

Allergen Info Description
Allergen ID 1916
Allergen Scientific Name Bet v 1.0101
Allergen Species - Systematic Name Betula verrucosa (Betula pendula)
Allergen Species - Common Name White birch
Allergen Common source tree
Allergen Common name Fagales
Allergen Keywords Pathogenesis-related protein, PR-10, Bet v 1 family member
Allergen IUIS (Yes=1, No=0) 1
Bet v 1.0101 - References
ID Reference
Pubmed ID: 2571499
Breiteneder H, Pettenburger K, Bito A, Valenta R, Kraft D, Rumpold H, Scheiner O, Breitenbach M. The gene coding for the major birch pollen allergen Betv1, is highly homologous to a pea disease resistance response gene. EMBO J. 1989 Jul;8(7):1935-8. doi: 10.1002/j.1460-2075.1989.tb03597.x. PMID: 2571499; PMCID: PMC401053.
Bet v 1.0101 - Protein Sequences
Source Link to source
GenBank CAA33887
Bet v 1.0101 - PDB Structure
PDB Id PDB Name PDB Entry Deposition Date Experiment Type Observation
1916 335 4A88 1977 X-ray diffraction resolution 1.51 A Crystal Structure of native Major Birch Pollen Allergen Bet v 1 isoform a
4A88.pdb


Bet v 1.0101 - Sequence Search :
Sequence Header Sequence
Bet v 1.0101
SDAP Sequence ID: 1658
SDAP Allergen ID: 1916
MGVFNYETETTSVIPAARLFKAFILDGDNLFPKVAPQAISSVENIEGNGGPGTIKKISFPEGFPFKYVKDRVDEVDHTNFKYNYSVIEGGPIGDTLEKISNEIKIVATPDGGSILKISNKYHTKGDHEVKAEQVKASKEMGETLLRAVESYLLAHSDAYN
View 3D Structure Click here to view 3D model structure of allergen
Fasta Search in SDAP
Blast Swissprot database search at NCBI
Blast PDB database search at NCBI
Blast NR database search at NCBI
Bet v 1.0101 - Statistics from Alphafold ( SI is sequence id, Best template format: PDB_ChainID)
Allergen Name pLDDT Score pTM Score Best PDB template %Seq ID Align length Seq length Query Range Sequence Range E-Value Bit Score Download Model
Bet v 1.0101 95.95 0.86 7MXL_C 100 160 160 1 - 160 1 - 160 0 325 Download (SI: 1658)
Bet v 1.0101 - Alphafold Theoretical Model Structure
Model Structure
1658_relaxed_rank_1_model_2.pdb


Coverage Plddt
Bet v 1.0101 - Protein Sequence Properties!
Protein Sequence Protease cleavage sites PeptideCutter at ExPASy
CAA33887 Click here to process the data
Bet v 1.0101 - PFAM Information
SeqID Aller ID AlnS AlnE EnvS EnvE PFAM ID Family Type Clan Description
1658 1916 1 155 1 155 PF00407 Bet_v_1 Domain CL0209 Pathogenesis-related protein Bet v 1 family
Where: AlnS= Alignment start position, AlnE= Alignment end position, EnvS= Envelope start position, EnvE= Envelope end position.

List of B-cell epitopes predicted by BepiPred method using a window size of 9 amino acids

Cleck here for epitopes predicted by BepiPred method
Bet v 1.0101 - Epitope Information from published data
No. Position Epitope Sequence Epitope Type View epitope Search epitope in SDAP PD search in SDAP Cross-React search
No epitope information found!
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