The University of Texas Medical Branch
Department of Biochemistry and Molecular Biology Sealy Center for Structural Biology Computational Biology



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                SDAP 2.0 - Structural Database of Allergenic Proteins
Go to: SDAP All allergens       Go to: SDAP Food allergens
Send a comment to Werner Braun      Submit new allergen information to SDAP
  
Alphabetical listing of allergens: A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

Access to SDAP is available free of charge for Academic and non-profit use.< Licenses for commercial use can be obtained by contacting W. Braun (webraun@utmb.edu). Secure access to SDAP is available from https://fermi.utmb.edu/SDAP

Allergen Info Description
Allergen ID 89
Allergen Scientific Name Der f 16
Allergen Species - Systematic Name Dermatophagoides farinae
Allergen Species - Common Name American house dust mite
Allergen Common source mites
Allergen Common name
Allergen Keywords gelsolin/villin
Allergen IUIS (Yes=1, No=0) 1
ID Allergen Name
Der f 16 - References
ID Reference
Pubmed ID: 11959139
Kawamoto S, Suzuki T, Aki T, Katsutani T, Tsuboi S, Shigeta S, Ono K. Der f 16: a novel gelsolin-related molecule identified as an allergen from the house dust mite, Dermatophagoides farinae. FEBS Lett. 2002 Apr 10;516(1-3):234-8.
Der f 16 - Protein Sequences
Source Link to source
GenBank 21591547
Der f 16 - Sequence Search :
Sequence Header Sequence
Der f 16
SDAP Sequence ID: 1064
SDAP Allergen ID: 89
MAAHDKNFDVIPIGHTFFFIWRIKQFELVPVPKEDYGKFYKGDCYIVACCTENPTGGHSKMESKPILNGHGYCHIHFWIGSESTKDEAGVAAIKSVELDDFLGGYPVQHREIEEFESRQFSSYFKNGIIYLKGGYESGFTKMIDELKPSLLHVKGKKRPIVYECAEISWKVMNNGDVFILLVPNFVFVWTGKHSNRMERTTAIRVANDLKSELNRFKLSSVILEDGKEVEQTSGAEYDAFNKALSLDKKDIDLKQMPKGYDYAASDKSFESHERSFVTLYKCFEGTETIDISFVKNGPLSRADLDTNDTFIVENGSEGLWVWVGKKATQKERQSAIKYAMELINKKKYPNNTPVTKVLEGDESVEFKSLFESWQMSEQEKITSARLFRVSRNGIFKQVANYEPDDLEEDNIMILDVMDKIYVWIGNQFAERIADEAHVDKVAQRFIQEDKSGRKFQPNQIIKLKQGSEDGAFKSYFPKWN
View 3D Structure Click here to view 3D model structure of allergen
Fasta Search in SDAP
Blast Swissprot database search at NCBI
Blast PDB database search at NCBI
Blast NR database search at NCBI
Der f 16 - Statistics from Alphafold ( SI is sequence id, Best template format: PDB_ChainID)
Allergen Name pLDDT Score pTM Score Best PDB template %Seq ID Align length Seq length Query Range Sequence Range E-Value Bit Score Download Model
Der f 16.0101 87.7 0.71 3FFK_A 34.435 363 480 20 - 378 21 - 352 0 216 Download (SI: 1064)
Der f 16 - Alphafold Theoretical Model Structure
Model Structure
1064_relaxed_rank_1_model_2.pdb


Coverage Plddt
Der f 16 - Protein Sequence Properties!
Protein Sequence Protease cleavage sites PeptideCutter at ExPASy
21591547 Click here to process the data
Der f 16 - PFAM Information
SeqID Aller ID AlnS AlnE EnvS EnvE PFAM ID Family Type Clan Description
1064 89 26 120 25 121 PF00626 Gelsolin Domain CL0092 Gelsolin repeat
1064 89 164 229 160 231 PF00626 Gelsolin Domain CL0092 Gelsolin repeat
1064 89 295 366 292 367 PF00626 Gelsolin Domain CL0092 Gelsolin repeat
1064 89 404 468 396 473 PF00626 Gelsolin Domain CL0092 Gelsolin repeat
Where: AlnS= Alignment start position, AlnE= Alignment end position, EnvS= Envelope start position, EnvE= Envelope end position.

List of B-cell epitopes predicted by BepiPred method using a window size of 9 amino acids

Cleck here for epitopes predicted by BepiPred method
Der f 16 - Epitope Information from published data
No. Position Epitope Sequence Epitope Type View epitope Search epitope in SDAP PD search in SDAP Cross-React search
No epitope information found!
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