The University of Texas Medical Branch
Department of Biochemistry and Molecular Biology Sealy Center for Structural Biology Computational Biology


SDAP Home Page
SDAP Overview

Use SDAP
SDAP All
SDAP Food

SDAP Tools
FAO/WHO Allergenicity Test
FASTA Search in SDAP
Peptide Match
Peptide Similarity
Peptide-Protein PD Index
Aller_ML, Allergen Markup Language
List SDAP

About SDAP
General Information
Manual
FAQ
Publications
Who Are We
Advisory Board

Allergy Links

Our Software Tools
MPACK
FANTOM
GETAREA
NOAH/DIAMOD
MASIA
PCPMer
InterProSurf
EpiSearch

Allergen Databases
WHO/IUIS Allergen Nomenclature database
FARRP Allergen Protein Database (University of Nebraska)
Allergen Database for Food Safety (ADFS)
COMPARE database
ALLFAM (Medical University of Vienna)
Allermatch (Wageninen University)

Protein Databases
PDB
MMDB - Entrez
SWISS-PROT
NCBI - Entrez
PIR

Protein Classification
CATH
CE
FSSP
iProClass
ProtoMap
SCOP
TOPS
VAST

Bioinformatics Servers
@TOME
BLAST @ NCBI
BLAST @ PIR
FASTA @ PIR
Peptide Match @ PIR
ClustalW @ BCM
ClustalW @ EMBL - EBI
ClustalW @ PIR

Bioinformatics Tools
Cn3D
MolMol

Bioinformatics Links
Bioinformatics Links Directory

SDAP - All Allergens
Go to: SDAP All allergens       Go to: SDAP Food allergens
Send a comment to Ovidiu Ivanciuc      Submit new allergen information to SDAP
Last Updated: Nov 1, 2021  
Alphabetical listing of allergens: A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
Access to SDAP is available free of charge for Academic and non-profit use.
Licenses for commercial use can be obtained by contacting W. Braun (webraun@utmb.edu).
Secure access to SDAP is available from https://fermi.utmb.edu/SDAP

Search Results: Peptide Similarity

Query peptide: GMKAKEDPR

NoAllergenLink to NCBI/
PIR/SwissProt
PD Sequence
Similarity
Index
z(PD,min)z(PD,all)Start
Residue
Matching regionEnd
Residue
1Hum j 1 33113263 0.00 7.8434 7.5639 53GMKAKEDPR61
2Amb a 3 P00304 6.11 3.7681 5.0710 13GWKLQSDPR21
3Dol m 1.02 P53357 6.13 3.7547 5.0627 273GLNAKEYPK281
4Der p 18.0101 CHL18_DERPT 6.91 3.2364 4.7457 149GMQAKDSDN157
5Der f 18.0101 27550039 6.91 3.2364 4.7457 149GMQAKDSDN157
6Lup an 1.0101 169950562 7.08 3.1205 4.6748 530GINANENQR538
7Per a 11.0101 AKH04310 7.14 3.0816 4.6510 15GVQSQKDPK23
8Dau c 5.0101 H2DF86 7.16 3.0663 4.6416 196TIKAVDDPR204
9Len c 1.0101 29539109 7.21 3.0317 4.6205 359GINAKNNQR367
10Len c 1.0102 29539111 7.21 3.0317 4.6205 356GINAKNNQR364
11Dol m 1.0101 Q06478 7.42 2.8960 4.5375 287GLNAKKYPK295
12Ves s 1.0101 3989146 7.45 2.8734 4.5237 268GLKAKSYPN276
13Asp f 18.0101 2143219 7.53 2.8214 4.4918 34SMNAKEVPD42
14Hom s 1 2342526 7.82 2.6272 4.3730 495GWEEDEDPE503
15Hom s 1.0101 2723284 7.82 2.6272 4.3730 538GWEEDEDPE546
16Api m 12.0101 Q868N5 7.84 2.6099 4.3625 1024PMKGEEKSR1032
17Cul q 3.01 Q95V93_CULQU 7.89 2.5767 4.3422 243NCKAKDESK251
18Vesp v 1.0101 PA1_VESVE 7.93 2.5538 4.3281 274GLNAKRYPK282
19Bet v 6.0102 10764491 7.96 2.5327 4.3152 198TIRAVDDPR206
20Pyr c 5 3243234 7.96 2.5327 4.3152 198TIRAVDDPR206
21Bet v 6.0101 4731376 7.96 2.5327 4.3152 198TIRAVDDPR206
22Cor a 6.0101 A0A0U1VZC8_CORAV 7.96 2.5327 4.3152 198TIRAVDDPR206
23Hom s 4 3297882 8.00 2.5079 4.3000 94GMRHRDRPT102
24Ara h 11.0101 Q45W87 8.06 2.4660 4.2744 9GRQRQEQPR17
25Der p 32.0101 QAT18643 8.09 2.4472 4.2629 210GTKAKGDND218
26Vesp c 1.0101 QAT18643 8.19 2.3826 4.2234 271GLNAKTYPK279
27Can f 2 O18874 8.20 2.3747 4.2186 15GLQAQEGNH23
28Aed a 1 P50635 8.29 2.3120 4.1802 329DHKVQQDPQ337
29Cav p 4.0101 Q6WDN9_CAVPO 8.32 2.2904 4.1670 113DCCAKEDPD121
30Api m 12.0101 Q868N5 8.44 2.2133 4.1198 1583MLKASEDYR1591
31Pis v 5.0101 171853009 8.45 2.2045 4.1145 295TMKLKENIH303
32Mala s 12.0101 78038796 8.47 2.1894 4.1052 170GMKKSEHFR178
33Gos h 2 P09799 8.48 2.1860 4.1032 30GRRSEDDPQ38
34Cuc m 1 807698 8.49 2.1790 4.0989 560PMNARFNPQ568
35Gly m conglycinin 169927 8.50 2.1731 4.0952 141GINAENNQR149
36Gly m conglycinin 169929 8.50 2.1731 4.0952 562GINAENNQR570
37Gly m 5.0201 Q9FZP9 8.50 2.1731 4.0952 482GINAENNQR490
38Vig r 2.0101 Q198W3 8.50 2.1731 4.0952 374GINAENNQR382
39Gly m conglycinin 256427 8.50 2.1731 4.0952 362GINAENNQR370
40Gly m 5.0101 O22120 8.50 2.1731 4.0952 466GINAENNQR474
41Gly m conglycinin 18536 8.50 2.1731 4.0952 528GINAENNQR536
42Vig r 2.0201 B1NPN8 8.50 2.1731 4.0952 381GINAENNQR389
43Ves v 1 P49369 8.57 2.1260 4.0664 306GLNAKKYPS314
44Ves m 1 P51528 8.57 2.1260 4.0664 270GLNAKKYPS278
45Cla h 9.0101 60116876 8.59 2.1129 4.0584 458GYKATHRPT466
46Ara h 1 P43238 8.61 2.1011 4.0512 532GINAENNHR540
47Ara h 1 P43237 8.61 2.1011 4.0512 527GINAENNHR535
48Api m 12.0101 Q868N5 8.67 2.0616 4.0271 621AHQEKDSPR629
49Fra e 1.0102 56122438 8.72 2.0287 4.0069 42QCKEKENGK50
50Car i 2.0101 VCL_CARIL 8.83 1.9529 3.9606 141DDDDKENPR149

Histogram for best protein-peptide similarity index
Number of windows: 1698
Average PD: 11.756151
Standard deviation: 1.498851
1 0.5 1
2 1.0 0
3 1.5 0
4 2.0 0
5 2.5 0
6 3.0 0
7 3.5 0
8 4.0 0
9 4.5 0
10 5.0 0
11 5.5 0
12 6.0 0
13 6.5 2
14 7.0 2
15 7.5 7
16 8.0 11
17 8.5 18
18 9.0 14
19 9.5 42
20 10.0 56
21 10.5 134
22 11.0 194
23 11.5 220
24 12.0 278
25 12.5 240
26 13.0 181
27 13.5 147
28 14.0 59
29 14.5 42
30 15.0 14
31 15.5 11
32 16.0 8
33 16.5 7
34 17.0 3
35 17.5 1
36 18.0 5
37 18.5 0
38 19.0 0
39 19.5 0
40 20.0 0

Histogram for all protein-peptide similarity indices
Number of windows: 400198
Average PD: 18.533475
Standard deviation: 2.450265
1 0.5 1
2 1.0 0
3 1.5 0
4 2.0 0
5 2.5 0
6 3.0 0
7 3.5 0
8 4.0 0
9 4.5 0
10 5.0 0
11 5.5 0
12 6.0 0
13 6.5 2
14 7.0 2
15 7.5 7
16 8.0 11
17 8.5 19
18 9.0 15
19 9.5 48
20 10.0 86
21 10.5 196
22 11.0 375
23 11.5 505
24 12.0 1009
25 12.5 1627
26 13.0 2237
27 13.5 3747
28 14.0 4894
29 14.5 7468
30 15.0 9851
31 15.5 12998
32 16.0 16537
33 16.5 19586
34 17.0 23217
35 17.5 27678
36 18.0 29353
37 18.5 31329
38 19.0 31946
39 19.5 31317
40 20.0 29634
41 20.5 26773
42 21.0 23298
43 21.5 19284
44 22.0 15557
45 22.5 11342
46 23.0 7842
47 23.5 4841
48 24.0 2752
49 24.5 1599
50 25.0 811
51 25.5 267
52 26.0 100
53 26.5 35
54 27.0 0
Query sequence: GMKAKEDPR

SDAP Home Page | Search SDAP | SDAP Manual | SDAP FAQ | Contact  
UTMB | Search | Directories | UTMB Map | News | Employment | Sitemap 
This site published by Ovidiu Ivanciuc
Copyright   2001-2021  The University of Texas Medical Branch. Please review our privacy policy and Internet guidelines.