The University of Texas Medical Branch
Department of Biochemistry and Molecular Biology Sealy Center for Structural Biology Computational Biology


SDAP Home Page
SDAP Overview

Use SDAP
SDAP All
SDAP Food

SDAP Tools
FAO/WHO Allergenicity Test
FASTA Search in SDAP
Peptide Match
Peptide Similarity
Peptide-Protein PD Index
Aller_ML, Allergen Markup Language
List SDAP

About SDAP
General Information
Manual
FAQ
Publications
Who Are We
Advisory Board

Allergy Links

Our Software Tools
MPACK
FANTOM
GETAREA
NOAH/DIAMOD
MASIA
PCPMer
InterProSurf
EpiSearch

Allergen Databases
WHO/IUIS Allergen Nomenclature database
FARRP Allergen Protein Database (University of Nebraska)
Allergen Database for Food Safety (ADFS)
COMPARE database
ALLFAM (Medical University of Vienna)
Allermatch (Wageninen University)

Protein Databases
PDB
MMDB - Entrez
SWISS-PROT
NCBI - Entrez
PIR

Protein Classification
CATH
CE
FSSP
iProClass
ProtoMap
SCOP
TOPS
VAST

Bioinformatics Servers
@TOME
BLAST @ NCBI
BLAST @ PIR
FASTA @ PIR
Peptide Match @ PIR
ClustalW @ BCM
ClustalW @ EMBL - EBI
ClustalW @ PIR

Bioinformatics Tools
Cn3D
MolMol

Bioinformatics Links
Bioinformatics Links Directory

SDAP - All Allergens
Go to: SDAP All allergens       Go to: SDAP Food allergens
Send a comment to Ovidiu Ivanciuc      Submit new allergen information to SDAP
Last Updated: Nov 1, 2021  
Alphabetical listing of allergens: A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
Access to SDAP is available free of charge for Academic and non-profit use.
Licenses for commercial use can be obtained by contacting W. Braun (webraun@utmb.edu).
Secure access to SDAP is available from https://fermi.utmb.edu/SDAP

Search Results: Peptide Similarity

Query peptide: GNSGDRNDN

NoAllergenLink to NCBI/
PIR/SwissProt
PD Sequence
Similarity
Index
z(PD,min)z(PD,all)Start
Residue
Matching regionEnd
Residue
1For t 1.0101 188572341 0.00 6.8234 6.8548 97GNSGDRNDN105
2Sal s 6.0101 XP_014059932 5.24 3.5525 4.7969 1046GKSGDRGES1054
3Lat c 6.0101 XP_018521723 5.24 3.5525 4.7969 1046GKSGDRGES1054
4Sal s 6.0102 XP_014048044 5.24 3.5525 4.7969 1046GKSGDRGES1054
5Cuc ma 4.0101 11SB_CUCMA 5.71 3.2562 4.6105 221GSSGEKSGN229
6Pis v 2.0101 110349082 5.85 3.1687 4.5555 223GQQGQQSNN231
7Sal s 6.0202 XP_014033985 5.93 3.1164 4.5225 343GPSGQKGDS351
8Sal s 6.0201 XP_013998297 5.93 3.1164 4.5225 343GPSGQKGDS351
9Mala s 12.0101 78038796 6.28 2.9017 4.3875 79GNSGYDDND87
10Ric c 1 P01089 6.29 2.8921 4.3814 185GQGPRRSDN193
11Lat c 6.0201 XP_018553992 6.44 2.8038 4.3259 1045GKNGDRGET1053
12QYS16039 QYS16039 6.45 2.7934 4.3193 167GDSSRRSAN175
13Sal s 6.0101 XP_014059932 6.50 2.7637 4.3006 611GPSGERGEQ619
14Gos h 3 P09802 6.56 2.7269 4.2775 171GNSANQLDN179
15Lat c 6.0101 XP_018521723 6.57 2.7193 4.2727 302GPSGARGND310
16Ves p 5 P35785 6.62 2.6892 4.2538 117GSTADKYDN125
17Gos h 4 P09800 6.64 2.6751 4.2449 213GQSRDRNQR221
18Gal d vitellogenin 63887 6.80 2.5779 4.1837 1187SNSSKRSSS1195
19Gal d vitellogenin 212881 6.80 2.5779 4.1837 1178SNSSKRSSS1186
20Gal d vitellogenin 63887 6.80 2.5779 4.1837 1176SNSSKRSSS1184
21Gal d vitellogenin 212881 6.80 2.5779 4.1837 1189SNSSKRSSS1197
22Pis v 2.0101 110349082 6.85 2.5441 4.1625 473GSSSQRKSQ481
23Der p 4 5059162 7.00 2.4516 4.1043 354GPPSDKNGN362
24Tri a glutenin 21751 7.03 2.4320 4.0919 464GQPGQRQQP472
25Tri a glutenin 21779 7.03 2.4320 4.0919 476GQPGQRQQP484
26Tri a glutenin 21743 7.04 2.4272 4.0890 357QQSGQRQQD365
27Tri a glutenin 170743 7.04 2.4272 4.0890 351QQSGQRQQD359
28Gly m 8 2SS_SOYBN 7.06 2.4152 4.0814 55GDDDDDDDD63
29Cor a 10 10944737 7.14 2.3646 4.0496 653GGSGEEDED661
30Lat c 6.0101 XP_018521723 7.15 2.3564 4.0444 1016GPKGDRGES1024
31Sal s 6.0102 XP_014048044 7.18 2.3374 4.0324 656GSAGSRGDR664
32Der f 28.0101 L7V065_DERFA 7.19 2.3296 4.0276 382GDTSSKSTN390
33Pen c 19 Q92260 7.19 2.3296 4.0276 249GDTSSKSTN257
34Sal s 6.0201 XP_013998297 7.21 2.3174 4.0198 727GQSGPRGEK735
35Sal s 6.0201 XP_013998297 7.25 2.2930 4.0045 703GPSGERGEG711
36Sal s 6.0101 XP_014059932 7.26 2.2874 4.0010 761GSPGDKGET769
37Sal s 6.0102 XP_014048044 7.26 2.2874 4.0010 761GSPGDKGET769
38Der f 27.0101 AIO08851 7.27 2.2818 3.9975 23VGSGSRDNN31
39Der f 27.0101 AIO08851 7.28 2.2770 3.9944 61SSSGSRGSS69
40Lat c 6.0301 XP_018522130 7.29 2.2693 3.9896 133GKAGDDGNN141
41Der f 27.0101 AIO08851 7.32 2.2532 3.9794 24GSGSRDNNN32
42Car i 4.0101 158998780 7.36 2.2281 3.9637 308SRRGGRDDN316
43Jug r 4.0101 Q2TPW5 7.36 2.2281 3.9637 307SRRGGRDDN315
44Jug n 4.0101 JUGN4_JUGNI 7.36 2.2281 3.9637 310SRRGGRDDN318
45Lat c 6.0201 XP_018553992 7.39 2.2103 3.9525 913GSSGEKGSP921
46For t 1.0101 188572341 7.43 2.1797 3.9332 100GDRNDNNNS108
47Tri a glutenin 22090 7.44 2.1765 3.9312 521GHPGQRQQP529
48Lat c 6.0301 XP_018522130 7.45 2.1685 3.9262 682GANGDKGES690
49Sal s 6.0102 XP_014048044 7.46 2.1628 3.9226 725GLKGDRGDQ733
50Sal s 6.0101 XP_014059932 7.46 2.1628 3.9226 725GLKGDRGDQ733

Histogram for best protein-peptide similarity index
Number of windows: 1698
Average PD: 10.924087
Standard deviation: 1.600967
1 0.5 1
2 1.0 0
3 1.5 0
4 2.0 0
5 2.5 0
6 3.0 0
7 3.5 0
8 4.0 0
9 4.5 0
10 5.0 0
11 5.5 3
12 6.0 4
13 6.5 4
14 7.0 6
15 7.5 17
16 8.0 25
17 8.5 32
18 9.0 93
19 9.5 110
20 10.0 157
21 10.5 177
22 11.0 257
23 11.5 195
24 12.0 181
25 12.5 214
26 13.0 105
27 13.5 55
28 14.0 21
29 14.5 15
30 15.0 8
31 15.5 4
32 16.0 6
33 16.5 3
34 17.0 2
35 17.5 2

Histogram for all protein-peptide similarity indices
Number of windows: 400198
Average PD: 17.443180
Standard deviation: 2.544656
1 0.5 1
2 1.0 0
3 1.5 0
4 2.0 0
5 2.5 0
6 3.0 0
7 3.5 0
8 4.0 0
9 4.5 0
10 5.0 0
11 5.5 3
12 6.0 4
13 6.5 5
14 7.0 10
15 7.5 36
16 8.0 64
17 8.5 134
18 9.0 250
19 9.5 355
20 10.0 602
21 10.5 984
22 11.0 1430
23 11.5 1889
24 12.0 2700
25 12.5 4339
26 13.0 5534
27 13.5 7555
28 14.0 10172
29 14.5 13646
30 15.0 16607
31 15.5 19244
32 16.0 23986
33 16.5 26393
34 17.0 30199
35 17.5 31961
36 18.0 32616
37 18.5 31655
38 19.0 29303
39 19.5 26206
40 20.0 21651
41 20.5 17978
42 21.0 13378
43 21.5 9715
44 22.0 6716
45 22.5 4665
46 23.0 3104
47 23.5 2078
48 24.0 1180
49 24.5 833
50 25.0 516
51 25.5 329
52 26.0 124
53 26.5 36
54 27.0 11
Query sequence: GNSGDRNDN

SDAP Home Page | Search SDAP | SDAP Manual | SDAP FAQ | Contact  
UTMB | Search | Directories | UTMB Map | News | Employment | Sitemap 
This site published by Ovidiu Ivanciuc
Copyright   2001-2021  The University of Texas Medical Branch. Please review our privacy policy and Internet guidelines.