The University of Texas Medical Branch
Department of Biochemistry and Molecular Biology Sealy Center for Structural Biology Computational Biology


SDAP Home Page
SDAP Overview

Use SDAP
SDAP All
SDAP Food

SDAP Tools
FAO/WHO Allergenicity Test
FASTA Search in SDAP
Peptide Match
Peptide Similarity
Peptide-Protein PD Index
Aller_ML, Allergen Markup Language
List SDAP

About SDAP
General Information
Manual
FAQ
Publications
Who Are We
Advisory Board

Allergy Links

Our Software Tools
MPACK
FANTOM
GETAREA
NOAH/DIAMOD
MASIA
PCPMer
InterProSurf
EpiSearch

Allergen Databases
WHO/IUIS Allergen Nomenclature database
FARRP Allergen Protein Database (University of Nebraska)
Allergen Database for Food Safety (ADFS)
COMPARE database
ALLFAM (Medical University of Vienna)
Allermatch (Wageninen University)

Protein Databases
PDB
MMDB - Entrez
SWISS-PROT
NCBI - Entrez
PIR

Protein Classification
CATH
CE
FSSP
iProClass
ProtoMap
SCOP
TOPS
VAST

Bioinformatics Servers
@TOME
BLAST @ NCBI
BLAST @ PIR
FASTA @ PIR
Peptide Match @ PIR
ClustalW @ BCM
ClustalW @ EMBL - EBI
ClustalW @ PIR

Bioinformatics Tools
Cn3D
MolMol

Bioinformatics Links
Bioinformatics Links Directory

SDAP - All Allergens
Go to: SDAP All allergens       Go to: SDAP Food allergens
Send a comment to Ovidiu Ivanciuc      Submit new allergen information to SDAP
Last Updated: Nov 1, 2021  
Alphabetical listing of allergens: A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
Access to SDAP is available free of charge for Academic and non-profit use.
Licenses for commercial use can be obtained by contacting W. Braun (webraun@utmb.edu).
Secure access to SDAP is available from https://fermi.utmb.edu/SDAP

Search Results: Peptide Similarity

Query peptide: GPFNLRSRN

NoAllergenLink to NCBI/
PIR/SwissProt
PD Sequence
Similarity
Index
z(PD,min)z(PD,all)Start
Residue
Matching regionEnd
Residue
1Pis s 1.0101 CAF25232 0.00 6.3175 7.2718 225GPFNLRSRN233
2Pis s 1.0102 CAF25233 0.00 6.3175 7.2718 225GPFNLRSRN233
3Len c 1.0102 29539111 2.77 4.7362 6.1668 225EPFNLRSRN233
4Len c 1.0101 29539109 2.77 4.7362 6.1668 225EPFNLRSRN233
5Gly m conglycinin 256427 2.77 4.7362 6.1668 238EPFNLRSRN246
6Lup an 1.0101 169950562 3.07 4.5606 6.0440 401GPFNLRSNK409
7Gly m 5.0201 Q9FZP9 3.55 4.2874 5.8531 358KPFNLRSRD366
8Gly m conglycinin 18536 3.55 4.2874 5.8531 404KPFNLRSRD412
9Gly m 5.0101 O22120 3.55 4.2874 5.8531 342KPFNLRSRD350
10Car i 2.0101 VCL_CARIL 5.05 3.4315 5.2549 580GPISLKSQR588
11Jug r 2 6580762 5.18 3.3568 5.2027 384GPISLKSES392
12Ory s 1 8118432 5.37 3.2442 5.1241 290GPFSLRITN298
13Vig r 2.0101 Q198W3 5.59 3.1205 5.0377 254EPFNLRNSN262
14Vig r 2.0201 B1NPN8 5.71 3.0523 4.9900 257QPFNLRNQK265
15Jug n 2 31321944 5.88 2.9525 4.9202 272GPISLKSER280
16Ory s 1 8118439 6.20 2.7746 4.7959 230GPFSLRVTT238
17Pin k 2.0101 VCL_PINKO 6.22 2.7599 4.7857 266KPFNLRNQK274
18gal d 6.0101 P87498 6.26 2.7387 4.7709 1128PQINLKSRQ1136
19Gal d 6.0101 VIT1_CHICK 6.26 2.7387 4.7709 1128PQINLKSRQ1136
20Cyn d 15 32344781 6.56 2.5690 4.6522 75GPLNIRLRA83
21Ory s 1 8118425 6.57 2.5599 4.6458 249APFSIRIRN257
22Ory s 1 8118430 6.59 2.5507 4.6395 238APFSLRIRS246
23Gly m conglycinin 169929 6.61 2.5357 4.6289 439KPFNLGSRD447
24Gly m conglycinin 169927 6.61 2.5357 4.6289 17KPFNLGSRD25
25Gly m conglycinin 256427 6.89 2.3762 4.5175 32NPFYFRSSN40
26Zea m 1 Q07154 6.92 2.3614 4.5071 154GPFSIRLTS162
27Cyn d 1 O04701 6.92 2.3614 4.5071 208GPFSIRLTS216
28Zea m 1 P58738 6.92 2.3614 4.5071 232GPFSIRLTS240
29Bet v 3 P43187 6.92 2.3578 4.5047 27SSFRLRSES35
30Gly m 6.0201 P04405 7.01 2.3100 4.4712 452HTFNLKSQQ460
31Gly m glycinin G1 169973 7.01 2.3100 4.4712 462HTFNLKSQQ470
32Gly m glycinin G2 295800 7.01 2.3100 4.4712 452HTFNLKSQQ460
33Gly m 6.0101 P04776 7.01 2.3100 4.4712 462HTFNLKSQQ470
34Bet v 8.0101 AHF71027 7.09 2.2649 4.4397 58VPINLQNRP66
35Tri a ps93 4099919 7.10 2.2567 4.4340 234GPFSIRITS242
36Ory s 1 Q40638 7.18 2.2124 4.4030 227GPFSVRVTT235
37Ory s 1 8118421 7.18 2.2124 4.4030 230GPFSVRVTT238
38Tri a 17.0101 AMYB_WHEAT 7.21 2.1958 4.3914 313GYYNLDDRD321
39Tri a glutenin 886963 7.23 2.1820 4.3818 76PPFSLQQQP84
40Cyn d 1.0202 16076693 7.25 2.1743 4.3764 226GPFTIRLTS234
41Cyn d 1.0201 15384338 7.25 2.1743 4.3764 208GPFTIRLTS216
42Cyn d 1 16076695 7.25 2.1743 4.3764 226GPFTIRLTS234
43Cyn d 1.0203 16076697 7.25 2.1743 4.3764 226GPFTIRLTS234
44Uro m 1.0101 A0A4D6FZ45_9POAL 7.25 2.1743 4.3764 226GPFTIRLTS234
45Cyn d 1.0204 10314021 7.25 2.1743 4.3764 208GPFTIRLTS216
46Eur m 3 O97370 7.29 2.1461 4.3567 122SPMTLDQKN130
47Hol l 1 3860384 7.33 2.1279 4.3440 230GPFTVRYTT238
48Phl p 1.0101 3901094 7.33 2.1279 4.3440 230GPFTVRYTT238
49Lol p 1.0103 6599300 7.33 2.1279 4.3440 230GPFTVRYTT238
50Hol l 1.0102 1167836 7.33 2.1279 4.3440 215GPFTVRYTT223

Histogram for best protein-peptide similarity index
Number of windows: 1698
Average PD: 11.047500
Standard deviation: 1.748719
1 0.5 2
2 1.0 0
3 1.5 0
4 2.0 0
5 2.5 0
6 3.0 3
7 3.5 1
8 4.0 3
9 4.5 0
10 5.0 0
11 5.5 3
12 6.0 3
13 6.5 4
14 7.0 9
15 7.5 41
16 8.0 23
17 8.5 23
18 9.0 58
19 9.5 65
20 10.0 121
21 10.5 193
22 11.0 235
23 11.5 226
24 12.0 233
25 12.5 157
26 13.0 132
27 13.5 65
28 14.0 50
29 14.5 18
30 15.0 12
31 15.5 5
32 16.0 8
33 16.5 3
34 17.0 0
35 17.5 1
36 18.0 0
37 18.5 0
38 19.0 0
39 19.5 0
40 20.0 0
41 20.5 0
42 21.0 0
43 21.5 0
44 22.0 0

Histogram for all protein-peptide similarity indices
Number of windows: 400198
Average PD: 18.196503
Standard deviation: 2.502340
1 0.5 2
2 1.0 0
3 1.5 0
4 2.0 0
5 2.5 0
6 3.0 3
7 3.5 1
8 4.0 3
9 4.5 0
10 5.0 0
11 5.5 3
12 6.0 3
13 6.5 4
14 7.0 10
15 7.5 41
16 8.0 23
17 8.5 26
18 9.0 67
19 9.5 97
20 10.0 210
21 10.5 359
22 11.0 607
23 11.5 943
24 12.0 1561
25 12.5 2315
26 13.0 3382
27 13.5 4884
28 14.0 6972
29 14.5 9330
30 15.0 11870
31 15.5 15101
32 16.0 18122
33 16.5 21661
34 17.0 24460
35 17.5 28250
36 18.0 30946
37 18.5 31465
38 19.0 31314
39 19.5 30479
40 20.0 28347
41 20.5 24845
42 21.0 20406
43 21.5 16814
44 22.0 12056
45 22.5 9330
46 23.0 6168
47 23.5 3868
48 24.0 2058
49 24.5 1105
50 25.0 453
51 25.5 163
52 26.0 59
53 26.5 11
Query sequence: GPFNLRSRN

SDAP Home Page | Search SDAP | SDAP Manual | SDAP FAQ | Contact  
UTMB | Search | Directories | UTMB Map | News | Employment | Sitemap 
This site published by Ovidiu Ivanciuc
Copyright   2001-2021  The University of Texas Medical Branch. Please review our privacy policy and Internet guidelines.