The University of Texas Medical Branch
Department of Biochemistry and Molecular Biology Sealy Center for Structural Biology Computational Biology


SDAP Home Page
SDAP Overview

Use SDAP
SDAP All
SDAP Food

SDAP Tools
FAO/WHO Allergenicity Test
FASTA Search in SDAP
Peptide Match
Peptide Similarity
Peptide-Protein PD Index
Aller_ML, Allergen Markup Language
List SDAP

About SDAP
General Information
Manual
FAQ
Publications
Who Are We
Advisory Board

Allergy Links

Our Software Tools
MPACK
FANTOM
GETAREA
NOAH/DIAMOD
MASIA
PCPMer
InterProSurf
EpiSearch

Allergen Databases
WHO/IUIS Allergen Nomenclature database
FARRP Allergen Protein Database (University of Nebraska)
Allergen Database for Food Safety (ADFS)
COMPARE database
ALLFAM (Medical University of Vienna)
Allermatch (Wageninen University)

Protein Databases
PDB
MMDB - Entrez
SWISS-PROT
NCBI - Entrez
PIR

Protein Classification
CATH
CE
FSSP
iProClass
ProtoMap
SCOP
TOPS
VAST

Bioinformatics Servers
@TOME
BLAST @ NCBI
BLAST @ PIR
FASTA @ PIR
Peptide Match @ PIR
ClustalW @ BCM
ClustalW @ EMBL - EBI
ClustalW @ PIR

Bioinformatics Tools
Cn3D
MolMol

Bioinformatics Links
Bioinformatics Links Directory

SDAP - All Allergens
Go to: SDAP All allergens       Go to: SDAP Food allergens
Send a comment to Ovidiu Ivanciuc      Submit new allergen information to SDAP
Last Updated: Nov 1, 2021  
Alphabetical listing of allergens: A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
Access to SDAP is available free of charge for Academic and non-profit use.
Licenses for commercial use can be obtained by contacting W. Braun (webraun@utmb.edu).
Secure access to SDAP is available from https://fermi.utmb.edu/SDAP

Search Results: Peptide Similarity

Query peptide: GRDRQDPQQ

NoAllergenLink to NCBI/
PIR/SwissProt
PD Sequence
Similarity
Index
z(PD,min)z(PD,all)Start
Residue
Matching regionEnd
Residue
1Jug n 2 31321944 0.00 6.4040 7.1238 1GRDRQDPQQ9
2Jug r 2 6580762 0.00 6.4040 7.1238 113GRDRQDPQQ121
3Car i 2.0101 VCL_CARIL 0.00 6.4040 7.1238 309GRDRQDPQQ317
4Mac i 1.0101 AMP23_MACIN 4.16 4.0049 5.4171 142GDNKRDPQQ150
5Pru du 6.0201 307159114 5.13 3.4456 5.0192 211GRQQQQQQQ219
6Tri a glutenin 21743 5.42 3.2802 4.9015 197GQQRQQPGQ205
7Tri a glutenin 170743 5.42 3.2802 4.9015 191GQQRQQPGQ199
8Pru du 6 258588247 5.59 3.1784 4.8291 257GRPRQQEQQ265
9Pru du 6.0101 307159112 5.59 3.1784 4.8291 277GRPRQQEQQ285
10Pru du 6.0201 307159114 6.09 2.8912 4.6248 136GEDQQDRHQ144
11Ses i 4 10834827 6.39 2.7208 4.5036 3DRDRPHPHQ11
12Ara h 4 5712199 6.44 2.6895 4.4813 137SQQQQDSHQ145
13Tri a glutenin 21743 6.54 2.6348 4.4424 342GQEQQDQQS350
14Tri a glutenin 170743 6.54 2.6348 4.4424 336GQEQQDQQS344
15Pis v 5.0101 171853009 6.69 2.5472 4.3801 202SRGRRQSQQ210
16Vig r 2.0201 B1NPN8 6.71 2.5327 4.3698 214GQQQQQGQE222
17Lin u 1.01 Q8LPD3_LINUS 6.76 2.5049 4.3500 117GQMRQDIQQ125
18Lin u 1 Q8LPD3_LINUS 6.76 2.5049 4.3500 117GQMRQDIQQ125
19Mac i 1.0201 AMP22_MACIN 6.92 2.4101 4.2825 183EDNKRDPQQ191
20Tri a glutenin 21930 6.97 2.3855 4.2651 208SQSQQQSQQ216
21Tri a gliadin 170730 6.97 2.3855 4.2651 217SQSQQQSQQ225
22Tri a glutenin 21926 6.97 2.3855 4.2651 210SQSQQQSQQ218
23Tri a glutenin 886963 6.97 2.3855 4.2651 209SQSQQQSQQ217
24Tri a gliadin 170732 6.97 2.3855 4.2651 236SQSQQQSQQ244
25Dic v a 763532 6.97 2.3835 4.2636 149SRKRRDSNK157
26Act d 7.0101 P85076 7.03 2.3470 4.2377 188AQGRDDPNQ196
27Gos h 4 P09800 7.04 2.3451 4.2363 215SRDRNQRQS223
28Tri a 26.0101 P10388 7.10 2.3094 4.2109 537GYDPTSPQQ545
29Tri a glutenin 32968199 7.10 2.3094 4.2109 537GYDPTSPQQ545
30Tri a glutenin 736319 7.10 2.3094 4.2109 542GYDPTSPQQ550
31Tri a glutenin 21743 7.12 2.2963 4.2016 360GQRQQDQQS368
32Tri a glutenin 170743 7.12 2.2963 4.2016 354GQRQQDQQS362
33Ara h 2.0201 26245447 7.12 2.2960 4.2014 61GRDPYSPSQ69
34Aed a 4.0101 MALT_AEDAE 7.20 2.2522 4.1703 232GRYRNEPES240
35Gos h 2 P09799 7.23 2.2332 4.1567 31RRSEDDPQQ39
36Tri a gliadin 170728 7.25 2.2252 4.1510 15SQQQQQQQQ23
37Tri a gliadin 170720 7.25 2.2252 4.1510 115SQQQQQQQQ123
38Tri a gliadin 170722 7.25 2.2252 4.1510 115SQQQQQQQQ123
39Tri a gliadin 21753 7.25 2.2252 4.1510 115SQQQQQQQQ123
40Tri a gliadin 170724 7.25 2.2252 4.1510 122SQQQQQQQQ130
41Tri a gliadin 170712 7.25 2.2252 4.1510 115SQQQQQQQQ123
42Sin a 2.0101 Q2TLW0 7.25 2.2252 4.1510 241SQQQQQQQQ249
43Tri a gliadin 21755 7.25 2.2252 4.1510 115SQQQQQQQQ123
44Tri a gliadin 21673 7.25 2.2252 4.1510 129SQQQQQQQQ137
45Tri a gliadin 473876 7.25 2.2252 4.1510 115SQQQQQQQQ123
46Tri a gliadin 21761 7.25 2.2252 4.1510 115SQQQQQQQQ123
47Pis v 2.0101 110349082 7.25 2.2252 4.1510 30SQQRQQQQR38
48Pis v 2.0201 110349084 7.25 2.2252 4.1510 30SQQRQQQQR38
49Tri a glutenin 21743 7.25 2.2232 4.1496 419GQQGQQPEQ427
50Tri a glutenin 170743 7.25 2.2232 4.1496 413GQQGQQPEQ421

Histogram for best protein-peptide similarity index
Number of windows: 1698
Average PD: 11.103455
Standard deviation: 1.733839
1 0.5 3
2 1.0 0
3 1.5 0
4 2.0 0
5 2.5 0
6 3.0 0
7 3.5 0
8 4.0 0
9 4.5 1
10 5.0 0
11 5.5 3
12 6.0 2
13 6.5 2
14 7.0 11
15 7.5 33
16 8.0 23
17 8.5 54
18 9.0 73
19 9.5 84
20 10.0 97
21 10.5 124
22 11.0 186
23 11.5 236
24 12.0 227
25 12.5 264
26 13.0 129
27 13.5 74
28 14.0 23
29 14.5 14
30 15.0 8
31 15.5 11
32 16.0 9
33 16.5 5
34 17.0 1
35 17.5 0
36 18.0 0
37 18.5 0
38 19.0 0

Histogram for all protein-peptide similarity indices
Number of windows: 400198
Average PD: 17.362359
Standard deviation: 2.437246
1 0.5 3
2 1.0 0
3 1.5 0
4 2.0 0
5 2.5 0
6 3.0 0
7 3.5 0
8 4.0 0
9 4.5 1
10 5.0 0
11 5.5 3
12 6.0 2
13 6.5 3
14 7.0 13
15 7.5 45
16 8.0 77
17 8.5 361
18 9.0 201
19 9.5 317
20 10.0 716
21 10.5 903
22 11.0 1219
23 11.5 1663
24 12.0 2687
25 12.5 4107
26 13.0 5058
27 13.5 7652
28 14.0 9605
29 14.5 12663
30 15.0 16534
31 15.5 20390
32 16.0 24168
33 16.5 29013
34 17.0 31520
35 17.5 33944
36 18.0 33602
37 18.5 33181
38 19.0 30827
39 19.5 25454
40 20.0 21641
41 20.5 16473
42 21.0 12328
43 21.5 8752
44 22.0 5612
45 22.5 3909
46 23.0 2588
47 23.5 1417
48 24.0 874
49 24.5 433
50 25.0 187
51 25.5 46
Query sequence: GRDRQDPQQ

SDAP Home Page | Search SDAP | SDAP Manual | SDAP FAQ | Contact  
UTMB | Search | Directories | UTMB Map | News | Employment | Sitemap 
This site published by Ovidiu Ivanciuc
Copyright   2001-2021  The University of Texas Medical Branch. Please review our privacy policy and Internet guidelines.