The University of Texas Medical Branch
Department of Biochemistry and Molecular Biology Sealy Center for Structural Biology Computational Biology


SDAP Home Page
SDAP Overview

Use SDAP
SDAP All
SDAP Food

SDAP Tools
FAO/WHO Allergenicity Test
FASTA Search in SDAP
Peptide Match
Peptide Similarity
Peptide-Protein PD Index
Aller_ML, Allergen Markup Language
List SDAP

About SDAP
General Information
Manual
FAQ
Publications
Who Are We
Advisory Board

Allergy Links

Our Software Tools
MPACK
FANTOM
GETAREA
NOAH/DIAMOD
MASIA
PCPMer
InterProSurf
EpiSearch

Allergen Databases
WHO/IUIS Allergen Nomenclature database
FARRP Allergen Protein Database (University of Nebraska)
Allergen Database for Food Safety (ADFS)
COMPARE database
ALLFAM (Medical University of Vienna)
Allermatch (Wageninen University)

Protein Databases
PDB
MMDB - Entrez
SWISS-PROT
NCBI - Entrez
PIR

Protein Classification
CATH
CE
FSSP
iProClass
ProtoMap
SCOP
TOPS
VAST

Bioinformatics Servers
@TOME
BLAST @ NCBI
BLAST @ PIR
FASTA @ PIR
Peptide Match @ PIR
ClustalW @ BCM
ClustalW @ EMBL - EBI
ClustalW @ PIR

Bioinformatics Tools
Cn3D
MolMol

Bioinformatics Links
Bioinformatics Links Directory

SDAP - All Allergens
Go to: SDAP All allergens       Go to: SDAP Food allergens
Send a comment to Ovidiu Ivanciuc      Submit new allergen information to SDAP
Last Updated: Nov 1, 2021  
Alphabetical listing of allergens: A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
Access to SDAP is available free of charge for Academic and non-profit use.
Licenses for commercial use can be obtained by contacting W. Braun (webraun@utmb.edu).
Secure access to SDAP is available from https://fermi.utmb.edu/SDAP

Search Results: Peptide Similarity

Query peptide: GRGDQERQQ

NoAllergenLink to NCBI/
PIR/SwissProt
PD Sequence
Similarity
Index
z(PD,min)z(PD,all)Start
Residue
Matching regionEnd
Residue
1Pru du 6.0201 307159114 0.00 5.8590 7.0292 280GRGDQERQQ288
2Ses i 7.0101 Q9AUD2 4.58 3.3461 5.1944 214GRPQTEKQQ222
3Gos h 1 P09801.1 4.61 3.3331 5.1849 52TRGQKEQQQ60
4Jug r 2 6580762 5.07 3.0768 4.9978 29GQGQRQQQQ37
5Car i 2.0101 VCL_CARIL 5.07 3.0768 4.9978 225GQGQRQQQQ233
6Car i 2.0101 VCL_CARIL 5.07 3.0768 4.9978 166GQGQRQQQQ174
7Pru du 6.0101 307159112 5.26 2.9741 4.9228 337PRGRQEREH345
8Pru du 6 258588247 5.26 2.9741 4.9228 317PRGRQEREH325
9Pru du 6.0101 307159112 5.34 2.9298 4.8904 142QQGQQEQQQ150
10Pru du 6 258588247 5.34 2.9298 4.8904 122QQGQQEQQQ130
11Pru du 6.0201 307159114 5.53 2.8260 4.8146 211GRQQQQQQQ219
12Fag e 1 2317670 5.63 2.7710 4.7745 165SRGDQRTRQ173
13Fag e 1 2317670 5.63 2.7710 4.7745 195SRGDQRTRQ203
14Fag e 1 2317670 5.63 2.7710 4.7745 150SRGDQRTRQ158
15Fag e 1 2317670 5.63 2.7710 4.7745 180SRGDQRTRQ188
16Zan b 2.0102 QYU76046 5.65 2.7612 4.7673 221QRGEQEQEQ229
17Car i 2.0101 VCL_CARIL 5.85 2.6538 4.6889 366SRGREEEQQ374
18Jug r 2 6580762 5.85 2.6538 4.6889 169SRGREEEQQ177
19Fag e 1 29839419 5.87 2.6408 4.6794 165SRGDQRSRQ173
20Fag e 1 29839419 5.87 2.6408 4.6794 150SRGDQRSRQ158
21Gly m 8 2SS_SOYBN 6.00 2.5683 4.6265 53GRGDDDDDD61
22Gly m conglycinin 169929 6.12 2.5038 4.5794 134GKGSEEEQD142
23Gly m 5.0201 Q9FZP9 6.12 2.5038 4.5794 72GKGSEEEQD80
24Pru du 6.0101 307159112 6.26 2.4287 4.5246 277GRPRQQEQQ285
25Pru du 6 258588247 6.26 2.4287 4.5246 257GRPRQQEQQ265
26Sin a 2.0101 Q2TLW0 6.26 2.4283 4.5243 239GSSQQQQQQ247
27Gos h 1 P09801.1 6.32 2.3940 4.4992 345GRQSHRRQQ353
28Gos h 2 P09799 6.32 2.3940 4.4992 346GRQSHRRQQ354
29Pis v 2.0101 110349082 6.35 2.3785 4.4879 480SQSERERQR488
30Der f 11.0101 13785807 6.38 2.3600 4.4743 53NKSDKEKQK61
31Der p 11 37778944 6.38 2.3600 4.4743 139NKSDKEKQK147
32Blo t 11 21954740 6.38 2.3600 4.4743 139NKSDKEKQK147
33Lup an 1.0101 169950562 6.43 2.3333 4.4549 175SRSDSRRQR183
34Tri a glutenin 22090 6.44 2.3299 4.4524 426GQGQQTRQG434
35Tri a glutenin 22090 6.44 2.3299 4.4524 444GQGQQTRQG452
36Gly m 6.0401 Q9SB11 6.49 2.3002 4.4307 327SQGKREQDQ335
37Cor a 9 18479082 6.63 2.2214 4.3732 200GNPDDEHQR208
38Jug n 2 31321944 6.65 2.2153 4.3687 57SKGREEEQQ65
39Cor a 9 18479082 6.65 2.2136 4.3675 137QRSEQDRHQ145
40Lin u 1.01 Q8LPD3_LINUS 6.70 2.1833 4.3453 40GQGGQGQQQ48
41Lin u 1 Q8LPD3_LINUS 6.70 2.1833 4.3453 40GQGGQGQQQ48
42Lup an 1.0101 169950562 6.71 2.1793 4.3425 78GRSQSEESQ86
43Pis v 2.0101 110349082 6.77 2.1472 4.3190 129SRSRSERSQ137
44Car i 4.0101 158998780 6.77 2.1449 4.3174 201PQGQQEYEQ209
45Jug r 4.0101 Q2TPW5 6.77 2.1449 4.3174 200PQGQQEYEQ208
46Jug n 4.0101 JUGN4_JUGNI 6.77 2.1449 4.3174 203PQGQQEYEQ211
47Tri a 35.0101 283480513 6.78 2.1416 4.3149 57GHGDHQQTT65
48Pru du 6.0201 307159114 6.81 2.1257 4.3033 136GEDQQDRHQ144
49Lup an 1.0101 169950562 6.82 2.1198 4.2990 151GGGDERRQH159
50Tri a 26.0101 P10388 6.82 2.1196 4.2989 400GQGQQAQQP408

Histogram for best protein-peptide similarity index
Number of windows: 1698
Average PD: 10.686506
Standard deviation: 1.823952
1 0.5 1
2 1.0 0
3 1.5 0
4 2.0 0
5 2.5 0
6 3.0 0
7 3.5 0
8 4.0 0
9 4.5 0
10 5.0 2
11 5.5 4
12 6.0 3
13 6.5 12
14 7.0 16
15 7.5 23
16 8.0 54
17 8.5 49
18 9.0 134
19 9.5 140
20 10.0 150
21 10.5 157
22 11.0 243
23 11.5 162
24 12.0 169
25 12.5 119
26 13.0 109
27 13.5 68
28 14.0 30
29 14.5 16
30 15.0 8
31 15.5 12
32 16.0 5
33 16.5 7
34 17.0 4
35 17.5 0

Histogram for all protein-peptide similarity indices
Number of windows: 400198
Average PD: 17.558878
Standard deviation: 2.497978
1 0.5 1
2 1.0 0
3 1.5 0
4 2.0 0
5 2.5 0
6 3.0 0
7 3.5 0
8 4.0 0
9 4.5 0
10 5.0 2
11 5.5 7
12 6.0 10
13 6.5 16
14 7.0 25
15 7.5 50
16 8.0 114
17 8.5 114
18 9.0 467
19 9.5 349
20 10.0 490
21 10.5 807
22 11.0 1177
23 11.5 1479
24 12.0 2400
25 12.5 3423
26 13.0 5262
27 13.5 6919
28 14.0 9474
29 14.5 11993
30 15.0 15362
31 15.5 19515
32 16.0 22460
33 16.5 26248
34 17.0 29769
35 17.5 31503
36 18.0 31875
37 18.5 32457
38 19.0 30415
39 19.5 28128
40 20.0 23438
41 20.5 19179
42 21.0 14839
43 21.5 10811
44 22.0 7706
45 22.5 4886
46 23.0 3355
47 23.5 1851
48 24.0 972
49 24.5 566
50 25.0 203
51 25.5 78
Query sequence: GRGDQERQQ

SDAP Home Page | Search SDAP | SDAP Manual | SDAP FAQ | Contact  
UTMB | Search | Directories | UTMB Map | News | Employment | Sitemap 
This site published by Ovidiu Ivanciuc
Copyright   2001-2021  The University of Texas Medical Branch. Please review our privacy policy and Internet guidelines.