The University of Texas Medical Branch
Department of Biochemistry and Molecular Biology Sealy Center for Structural Biology Computational Biology


SDAP Home Page
SDAP Overview

Use SDAP
SDAP All
SDAP Food

SDAP Tools
FAO/WHO Allergenicity Test
FASTA Search in SDAP
Peptide Match
Peptide Similarity
Peptide-Protein PD Index
Aller_ML, Allergen Markup Language
List SDAP

About SDAP
General Information
Manual
FAQ
Publications
Who Are We
Advisory Board

Allergy Links

Our Software Tools
MPACK
FANTOM
GETAREA
NOAH/DIAMOD
MASIA
PCPMer
InterProSurf
EpiSearch

Allergen Databases
WHO/IUIS Allergen Nomenclature database
FARRP Allergen Protein Database (University of Nebraska)
Allergen Database for Food Safety (ADFS)
COMPARE database
ALLFAM (Medical University of Vienna)
Allermatch (Wageninen University)

Protein Databases
PDB
MMDB - Entrez
SWISS-PROT
NCBI - Entrez
PIR

Protein Classification
CATH
CE
FSSP
iProClass
ProtoMap
SCOP
TOPS
VAST

Bioinformatics Servers
@TOME
BLAST @ NCBI
BLAST @ PIR
FASTA @ PIR
Peptide Match @ PIR
ClustalW @ BCM
ClustalW @ EMBL - EBI
ClustalW @ PIR

Bioinformatics Tools
Cn3D
MolMol

Bioinformatics Links
Bioinformatics Links Directory

SDAP - All Allergens
Go to: SDAP All allergens       Go to: SDAP Food allergens
Send a comment to Ovidiu Ivanciuc      Submit new allergen information to SDAP
Last Updated: Nov 1, 2021  
Alphabetical listing of allergens: A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
Access to SDAP is available free of charge for Academic and non-profit use.
Licenses for commercial use can be obtained by contacting W. Braun (webraun@utmb.edu).
Secure access to SDAP is available from https://fermi.utmb.edu/SDAP

Search Results: Peptide Similarity

Query peptide: LSDGPNGGS

NoAllergenLink to NCBI/
PIR/SwissProt
PD Sequence
Similarity
Index
z(PD,min)z(PD,all)Start
Residue
Matching regionEnd
Residue
1Pha v 1 P25985 0.00 5.9990 6.8726 104LSDGPNGGS112
2Pha v 1 21044 0.00 5.9990 6.8726 105LSDGPNGGS113
3Pha v 1 21048 0.00 5.9990 6.8726 104LSDGPNGGS112
4Ara h 8.0101 37499626 3.56 4.0054 5.5218 103LVEGPNGGS111
5Vig r 1.0101 Q2VU97 4.02 3.7488 5.3479 104ISDGADGGS112
6Gly m 4 18744 4.44 3.5155 5.1899 104LVAGPNGGS112
7Asp f 1 250902 4.77 3.3325 5.0659 38LSDGKTGSS46
8Asp f 1 P04389 4.77 3.3325 5.0659 65LSDGKTGSS73
9Asp f 1 166486 4.77 3.3325 5.0659 65LSDGKTGSS73
10Sal s 6.0102 XP_014048044 5.76 2.7735 4.6871 923GGDGPNGPS931
11Fag s 1.0101 212291470 6.25 2.5026 4.5036 105LVASPDGGS113
12Pru ar 1 O50001 6.25 2.5026 4.5036 105LVASPDGGS113
13Cla h 7.0101 P42059 6.35 2.4460 4.4653 115ISTGTQGGG123
14Pru p 1.0101 Q2I6V8 6.46 2.3824 4.4222 105LVASPSGGS113
15Pru av 1 O24248 6.46 2.3824 4.4222 105LVASPSGGS113
16Mal d 1 1313972 6.63 2.2915 4.3606 105LIASPDGGS113
17Mal d 1 1313968 6.63 2.2915 4.3606 105LIASPDGGS113
18Mal d 1.0401 CAA96535 6.63 2.2915 4.3606 105LIASPDGGS113
19Mal d 1.0402 CAA96536 6.63 2.2915 4.3606 105LIASPDGGS113
20Mal d 1 1313970 6.63 2.2915 4.3606 105LIASPDGGS113
21Mal d 1.0403 CAA96537 6.63 2.2915 4.3606 105LIASPDGGS113
22Bet v 1.at42 4006955 6.75 2.2231 4.3142 105LVATPDGGS113
23Bet v 1.at5 4006965 6.75 2.2231 4.3142 105LVATPDGGS113
24Bet v 1.0118 CAA07329.1 6.75 2.2231 4.3142 105LVATPDGGS113
25Bet v 1.0205 Q39427_BETPN 6.75 2.2231 4.3142 105LVATPDGGS113
26Bet v 1.1801 1321718 6.75 2.2231 4.3142 105LVATPDGGS113
27Bet v 1.0206 CAA04828.1 6.75 2.2231 4.3142 104LVATPDGGS112
28Cla h 10.0101 P42039 6.79 2.1976 4.2970 62LASVPSGGS70
29Lol p 5 Q40240 6.79 2.1976 4.2969 12LRRGPRGGP20
30Ory s 1 8118432 6.81 2.1909 4.2924 80SSNGSSGGG88
31Gal d 6.0101 VIT1_CHICK 6.91 2.1322 4.2526 1147FGDSSSSGS1155
32gal d 6.0101 P87498 6.91 2.1322 4.2526 1147FGDSSSSGS1155
33Bet v 1.0601 452736 6.95 2.1118 4.2388 105IVATPNGGS113
34Bet v 1.0801 452740 6.95 2.1118 4.2388 105IVATPNGGS113
35Bet v 1 P43178 6.95 2.1118 4.2388 104IVATPNGGS112
36Bet v 1.0501 452734 6.95 2.1118 4.2388 105IVATPNGGS113
37Bet v 1 P43183 6.95 2.1118 4.2388 104IVATPNGGS112
38Bet v 1.0601 P43179 6.95 2.1118 4.2388 104IVATPNGGS112
39Bet v 1.0106 CAA54487 6.95 2.1118 4.2388 105IVATPNGGS113
40Bet v 1.0103 CAA54483.1 6.95 2.1118 4.2388 105IVATPNGGS113
41Bet v 1.0104 CAA54484.1 6.95 2.1118 4.2388 105IVATPNGGS113
42Que m 1.0101 AUH28179 7.10 2.0240 4.1793 105IVASPDGGS113
43Que a 1.0401 167472851 7.10 2.0240 4.1793 105IVASPDGGS113
44Que a 1.0301 167472849 7.10 2.0240 4.1793 105IVASPDGGS113
45Cas s 1 16555781 7.10 2.0240 4.1793 105IVASPDGGS113
46Gal d 6.0101 VIT1_CHICK 7.12 2.0153 4.1734 1388MSDSSSSSS1396
47gal d 6.0101 P87498 7.12 2.0153 4.1734 1388MSDSSSSSS1396
48Sch c 1.0101 D8Q9M3 7.14 2.0062 4.1672 470CSTGGGGGS478
49Asp f 16 3643813 7.18 1.9843 4.1524 313TSSGSNSSS321
50Que i 1.0101 QGS84240 7.31 1.9108 4.1026 104FVASPDGGS112

Histogram for best protein-peptide similarity index
Number of windows: 1698
Average PD: 10.721650
Standard deviation: 1.787229
1 0.5 3
2 1.0 0
3 1.5 0
4 2.0 0
5 2.5 0
6 3.0 0
7 3.5 0
8 4.0 1
9 4.5 2
10 5.0 3
11 5.5 0
12 6.0 1
13 6.5 5
14 7.0 26
15 7.5 15
16 8.0 63
17 8.5 60
18 9.0 67
19 9.5 119
20 10.0 151
21 10.5 216
22 11.0 193
23 11.5 191
24 12.0 220
25 12.5 123
26 13.0 101
27 13.5 68
28 14.0 31
29 14.5 13
30 15.0 9
31 15.5 5
32 16.0 4
33 16.5 4
34 17.0 2
35 17.5 1
36 18.0 0

Histogram for all protein-peptide similarity indices
Number of windows: 400198
Average PD: 18.128546
Standard deviation: 2.637800
1 0.5 3
2 1.0 0
3 1.5 0
4 2.0 0
5 2.5 0
6 3.0 0
7 3.5 0
8 4.0 1
9 4.5 2
10 5.0 3
11 5.5 0
12 6.0 1
13 6.5 5
14 7.0 26
15 7.5 17
16 8.0 66
17 8.5 72
18 9.0 109
19 9.5 208
20 10.0 446
21 10.5 672
22 11.0 1006
23 11.5 1568
24 12.0 2206
25 12.5 3341
26 13.0 4283
27 13.5 5739
28 14.0 7350
29 14.5 9752
30 15.0 12274
31 15.5 15232
32 16.0 17987
33 16.5 21338
34 17.0 23904
35 17.5 26913
36 18.0 28542
37 18.5 30607
38 19.0 29985
39 19.5 29439
40 20.0 27508
41 20.5 24238
42 21.0 20842
43 21.5 17188
44 22.0 13138
45 22.5 9493
46 23.0 6307
47 23.5 4156
48 24.0 1989
49 24.5 1247
50 25.0 659
51 25.5 235
52 26.0 70
53 26.5 23
54 27.0 7
Query sequence: LSDGPNGGS

SDAP Home Page | Search SDAP | SDAP Manual | SDAP FAQ | Contact  
UTMB | Search | Directories | UTMB Map | News | Employment | Sitemap 
This site published by Ovidiu Ivanciuc
Copyright   2001-2021  The University of Texas Medical Branch. Please review our privacy policy and Internet guidelines.