The University of Texas Medical Branch
Department of Biochemistry and Molecular Biology Sealy Center for Structural Biology Computational Biology


SDAP Home Page
SDAP Overview

Use SDAP
SDAP All
SDAP Food

SDAP Tools
FAO/WHO Allergenicity Test
FASTA Search in SDAP
Peptide Match
Peptide Similarity
Peptide-Protein PD Index
Aller_ML, Allergen Markup Language
List SDAP

About SDAP
General Information
Manual
FAQ
Publications
Who Are We
Advisory Board

Allergy Links

Our Software Tools
MPACK
FANTOM
GETAREA
NOAH/DIAMOD
MASIA
PCPMer
InterProSurf
EpiSearch

Allergen Databases
WHO/IUIS Allergen Nomenclature database
FARRP Allergen Protein Database (University of Nebraska)
Allergen Database for Food Safety (ADFS)
COMPARE database
ALLFAM (Medical University of Vienna)
Allermatch (Wageninen University)

Protein Databases
PDB
MMDB - Entrez
SWISS-PROT
NCBI - Entrez
PIR

Protein Classification
CATH
CE
FSSP
iProClass
ProtoMap
SCOP
TOPS
VAST

Bioinformatics Servers
@TOME
BLAST @ NCBI
BLAST @ PIR
FASTA @ PIR
Peptide Match @ PIR
ClustalW @ BCM
ClustalW @ EMBL - EBI
ClustalW @ PIR

Bioinformatics Tools
Cn3D
MolMol

Bioinformatics Links
Bioinformatics Links Directory

SDAP - All Allergens
Go to: SDAP All allergens       Go to: SDAP Food allergens
Send a comment to Ovidiu Ivanciuc      Submit new allergen information to SDAP
Last Updated: Nov 1, 2021  
Alphabetical listing of allergens: A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
Access to SDAP is available free of charge for Academic and non-profit use.
Licenses for commercial use can be obtained by contacting W. Braun (webraun@utmb.edu).
Secure access to SDAP is available from https://fermi.utmb.edu/SDAP

Search Results: Peptide Similarity

Query peptide: RGSNNPLSP

NoAllergenLink to NCBI/
PIR/SwissProt
PD Sequence
Similarity
Index
z(PD,min)z(PD,all)Start
Residue
Matching regionEnd
Residue
1Gos h 2 P09799 0.00 6.8620 7.1949 589RGSNNPLSP597
2Sol g 4.0201 7638030 5.22 3.6112 5.0829 41KGENDPINP49
3Sol g 4.0101 Q9NH75 5.22 3.6112 5.0829 41KGENDPINP49
4Sol s 3.0101 Q9NH75 5.48 3.4472 4.9763 64RGTNSPQPP72
5Aca f 2 A0A0A0RCW1_VACFA 6.29 2.9418 4.6480 16EGTNNHLSG24
6Sol r 3 P35779 6.33 2.9203 4.6340 64RGTNGPQPP72
7Sol i 3 P35778 6.33 2.9203 4.6340 86RGTNGPQPP94
8Cop c 3 5689671 6.55 2.7839 4.5454 205TSTNNPISQ213
9Sal s 6.0201 XP_013998297 6.58 2.7609 4.5304 1074RGSPGHLGP1082
10Sal s 6.0202 XP_014033985 6.58 2.7609 4.5304 1074RGSPGHLGP1082
11Tri a gliadin 170732 6.62 2.7370 4.5149 41PGHNNPLNN49
12Der f 28.0101 L7V065_DERFA 6.67 2.7062 4.4949 458VSSSSPVSP466
13Tri a gliadin 170712 6.83 2.6082 4.4312 51QGQQQPFPP59
14Lat c 6.0201 XP_018553992 6.92 2.5526 4.3951 669RGAPGPIGP677
15Mala s 12.0101 78038796 6.94 2.5373 4.3851 197HGSNGPIGT205
16Ole e 9 14279169 6.95 2.5335 4.3827 351KNTQNPTTP359
17Cup a 1 19069497 6.95 2.5327 4.3821 66SSDDNPVNP74
18Ara h 2.0101 9186485 7.14 2.4181 4.3077 63SPSQDPYSP71
19Ara h 2.0101 15418705 7.14 2.4181 4.3077 66SPSQDPYSP74
20Ara h 2.0201 26245447 7.14 2.4181 4.3077 66SPSQDPYSP74
21Sal s 6.0102 XP_014048044 7.17 2.3969 4.2940 979RGPPGPMGP987
22Sal s 6.0101 XP_014059932 7.17 2.3969 4.2940 979RGPPGPMGP987
23Lat c 6.0201 XP_018553992 7.17 2.3969 4.2940 978RGPPGPMGP986
24Cur l 4.0101 193507493 7.19 2.3866 4.2873 79RSSDLPVSN87
25Cry j 1.0103 19570317 7.23 2.3576 4.2684 66NSDDDPVNP74
26Cry j 1.0102 493634 7.23 2.3576 4.2684 66NSDDDPVNP74
27Cry j 1.0101 P18632 7.23 2.3576 4.2684 66NSDDDPVNP74
28Pro j 2.0101 A0A023W2L7_PROJU 7.24 2.3530 4.2654 16EGTNNHLSA24
29Phod s 1.0101 OBP_PHOSU 7.25 2.3444 4.2598 112VGKSQPLTP120
30Aed a 4.0101 MALT_AEDAE 7.27 2.3351 4.2538 241RTTDDPENP249
31Lat c 6.0301 XP_018522130 7.28 2.3291 4.2499 816RGDPGPAGP824
32Lat c 6.0101 XP_018521723 7.28 2.3262 4.2480 415KGNNGDIGP423
33Sal s 6.0101 XP_014059932 7.34 2.2888 4.2237 1051RGESGPAGP1059
34Lat c 6.0101 XP_018521723 7.34 2.2888 4.2237 1051RGESGPAGP1059
35Sal s 6.0102 XP_014048044 7.34 2.2888 4.2237 1051RGESGPAGP1059
36Sal s 6.0202 XP_014033985 7.37 2.2690 4.2109 231DGSTGPAGP239
37Sal s 6.0201 XP_013998297 7.37 2.2690 4.2109 231DGSTGPAGP239
38Hev b 14.0101 313870530 7.44 2.2271 4.1836 108KSSSRPLGD116
39Jun a 1.0101 P81294 7.45 2.2215 4.1800 66STDDNPVNP74
40Jun a 1.0102 AAD03609 7.45 2.2215 4.1800 66STDDNPVNP74
41Lat c 6.0101 XP_018521723 7.47 2.2118 4.1737 979RGPPGPAGP987
42Vig r 2.0101 Q198W3 7.48 2.2021 4.1674 39RGQNNPFYF47
43Gly m conglycinin 18536 7.49 2.1996 4.1657 591KGRKGPLSS599
44Gly m conglycinin 169927 7.49 2.1996 4.1657 204KGRKGPLSS212
45Gly m 5.0201 Q9FZP9 7.49 2.1996 4.1657 545KGRKGPLSS553
46Gly m 5.0101 O22120 7.49 2.1996 4.1657 529KGRKGPLSS537
47Gly m conglycinin 169929 7.49 2.1996 4.1657 625KGRKGPLSS633
48Gal d 6.0101 VIT1_CHICK 7.50 2.1894 4.1592 1094RSSSSSASS1102
49gal d 6.0101 P87498 7.50 2.1894 4.1592 1094RSSSSSASS1102
50Sal s 6.0102 XP_014048044 7.53 2.1734 4.1488 196AGSSGPMGP204

Histogram for best protein-peptide similarity index
Number of windows: 1698
Average PD: 11.017700
Standard deviation: 1.605610
1 0.5 1
2 1.0 0
3 1.5 0
4 2.0 0
5 2.5 0
6 3.0 0
7 3.5 0
8 4.0 0
9 4.5 0
10 5.0 0
11 5.5 3
12 6.0 0
13 6.5 3
14 7.0 10
15 7.5 23
16 8.0 38
17 8.5 44
18 9.0 73
19 9.5 72
20 10.0 145
21 10.5 160
22 11.0 212
23 11.5 189
24 12.0 263
25 12.5 144
26 13.0 213
27 13.5 48
28 14.0 26
29 14.5 11
30 15.0 10
31 15.5 5
32 16.0 2
33 16.5 2

Histogram for all protein-peptide similarity indices
Number of windows: 400198
Average PD: 17.781067
Standard deviation: 2.471355
1 0.5 1
2 1.0 0
3 1.5 0
4 2.0 0
5 2.5 0
6 3.0 0
7 3.5 0
8 4.0 0
9 4.5 0
10 5.0 0
11 5.5 3
12 6.0 0
13 6.5 3
14 7.0 10
15 7.5 30
16 8.0 58
17 8.5 65
18 9.0 135
19 9.5 159
20 10.0 299
21 10.5 584
22 11.0 948
23 11.5 1371
24 12.0 2032
25 12.5 3084
26 13.0 4840
27 13.5 5921
28 14.0 8383
29 14.5 11709
30 15.0 14620
31 15.5 17706
32 16.0 21164
33 16.5 24083
34 17.0 26816
35 17.5 29913
36 18.0 31894
37 18.5 32952
38 19.0 30746
39 19.5 29302
40 20.0 25997
41 20.5 21446
42 21.0 17634
43 21.5 13790
44 22.0 9376
45 22.5 5868
46 23.0 3508
47 23.5 1991
48 24.0 999
49 24.5 470
50 25.0 215
51 25.5 52
52 26.0 19
53 26.5 1
Query sequence: RGSNNPLSP

SDAP Home Page | Search SDAP | SDAP Manual | SDAP FAQ | Contact  
UTMB | Search | Directories | UTMB Map | News | Employment | Sitemap 
This site published by Ovidiu Ivanciuc
Copyright   2001-2021  The University of Texas Medical Branch. Please review our privacy policy and Internet guidelines.