The University of Texas Medical Branch
Department of Biochemistry and Molecular Biology Sealy Center for Structural Biology Computational Biology


SDAP Home Page
SDAP Overview

Use SDAP
SDAP All
SDAP Food

SDAP Tools
FAO/WHO Allergenicity Test
FASTA Search in SDAP
Peptide Match
Peptide Similarity
Peptide-Protein PD Index
Aller_ML, Allergen Markup Language
List SDAP

About SDAP
General Information
Manual
FAQ
Publications
Who Are We
Advisory Board

Allergy Links

Our Software Tools
MPACK
FANTOM
GETAREA
NOAH/DIAMOD
MASIA
PCPMer
InterProSurf
EpiSearch

Allergen Databases
WHO/IUIS Allergen Nomenclature database
FARRP Allergen Protein Database (University of Nebraska)
Allergen Database for Food Safety (ADFS)
COMPARE database
ALLFAM (Medical University of Vienna)
Allermatch (Wageninen University)

Protein Databases
PDB
MMDB - Entrez
SWISS-PROT
NCBI - Entrez
PIR

Protein Classification
CATH
CE
FSSP
iProClass
ProtoMap
SCOP
TOPS
VAST

Bioinformatics Servers
@TOME
BLAST @ NCBI
BLAST @ PIR
FASTA @ PIR
Peptide Match @ PIR
ClustalW @ BCM
ClustalW @ EMBL - EBI
ClustalW @ PIR

Bioinformatics Tools
Cn3D
MolMol

Bioinformatics Links
Bioinformatics Links Directory

SDAP - All Allergens
Go to: SDAP All allergens       Go to: SDAP Food allergens
Send a comment to Ovidiu Ivanciuc      Submit new allergen information to SDAP
Last Updated: Nov 1, 2021  
Alphabetical listing of allergens: A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
Access to SDAP is available free of charge for Academic and non-profit use.
Licenses for commercial use can be obtained by contacting W. Braun (webraun@utmb.edu).
Secure access to SDAP is available from https://fermi.utmb.edu/SDAP

Search Results: Peptide Similarity

Query peptide: RPFREGDLL

NoAllergenLink to NCBI/
PIR/SwissProt
PD Sequence
Similarity
Index
z(PD,min)z(PD,all)Start
Residue
Matching regionEnd
Residue
1Cuc ma 4.0101 11SB_CUCMA 0.00 6.2580 7.3485 150RPFREGDLL158
2Pis v 2.0101 110349082 3.64 4.2649 5.9414 147RPIQEGDVI155
3Cor a 9 18479082 3.91 4.1123 5.8337 148RHFREGDII156
4Jug r 4.0101 Q2TPW5 3.91 4.1123 5.8337 140RHFREGDII148
5Car i 4.0101 158998780 3.91 4.1123 5.8337 141RHFREGDII149
6Jug n 4.0101 JUGN4_JUGNI 4.04 4.0423 5.7843 143RHFREGDVI151
7Ses i 7.0101 Q9AUD2 4.10 4.0091 5.7608 151RQFRQGDIL159
8Gly m 6.0101 P04776 4.43 3.8317 5.6356 134YNFREGDLI142
9Gly m glycinin G1 169973 4.43 3.8317 5.6356 134YNFREGDLI142
10QYS16039 QYS16039 4.64 3.7138 5.5523 91RQIREGDII99
11Zan_b_2.02 QYU76044 4.64 3.7138 5.5523 88RQIREGDII96
12Pru du 6.0201 307159114 4.75 3.6547 5.5106 147RHIREGDII155
13Pis v 2.0201 110349084 4.75 3.6547 5.5106 152RHIREGDII160
14Gly m 6.0501 Q7GC77 4.76 3.6460 5.5045 139RHFNEGDVL147
15Gly m 6.0401 Q9SB11 4.76 3.6460 5.5045 139RHFNEGDVL147
16Gly m 6.0201 P04405 4.87 3.5871 5.4629 131HRFREGDLI139
17Gly m glycinin G2 295800 4.87 3.5871 5.4629 131HRFREGDLI139
18Zan b 2.0102 QYU76046 4.99 3.5215 5.4166 88RQLREGDIV96
19Zan b 2.0101 QYU76045 4.99 3.5215 5.4166 88RQLREGDIV96
20Gly m 6.0301 P11828 5.12 3.4519 5.3674 131YHFREGDLI139
21Pru du 6.0101 307159112 5.32 3.3394 5.2880 194RRIREGDVV202
22Pru du 6 258588247 5.32 3.3394 5.2880 174RRIREGDVV182
23Gos h 3 P09802 5.39 3.3058 5.2642 136RRFRQGDII144
24For t 2.0101 188572343 5.79 3.0833 5.1072 17KYNREGDLL25
25Car p papain 167391 5.98 2.9780 5.0329 247QPYNEGALL255
26Ana o 2 25991543 6.03 2.9504 5.0133 128RRFRRGDII136
27Gos h 4 P09800 6.35 2.7787 4.8921 151RRLKEGDVV159
28Ara h 4 5712199 6.45 2.7218 4.8520 148HRFNEGDLI156
29Pis v 5.0101 171853009 6.48 2.7040 4.8394 136QRFRKGDII144
30Car i 4.0101 158998780 6.51 2.6914 4.8305 410DELREGQLL418
31Jug n 4.0101 JUGN4_JUGNI 6.51 2.6914 4.8305 412DELREGQLL420
32Jug r 4.0101 Q2TPW5 6.51 2.6914 4.8305 409DELREGQLL417
33Ara h 3 3703107 6.61 2.6328 4.7892 128HRFDEGDLI136
34Ara h 3 O82580 6.61 2.6328 4.7892 125HRFDEGDLI133
35Mala s 9 19069920 6.91 2.4717 4.6754 293QPIRKEDFL301
36Sch c 1.0101 D8Q9M3 7.09 2.3734 4.6060 143RPQRDGPAL151
37Pol d 3.0101 XP_015174445 7.19 2.3180 4.5669 729KSLEESDIL737
38Pin k 2.0101 VCL_PINKO 7.31 2.2495 4.5186 148RKLEEGDVF156
39Pis v 2.0201 110349084 7.33 2.2423 4.5134 381EEIREGQLV389
40Pis v 2.0101 110349082 7.33 2.2423 4.5134 390EEIREGQLV398
41Ses i 4 10834827 7.47 2.1638 4.4580 131RGVQEGTLY139
42Lol p 4.0101 55859464 7.53 2.1319 4.4355 252RDSLEGDLL260
43Cop c 3 5689671 7.56 2.1147 4.4234 116RAAKEGDLT124
44Ber e 2 30313867 7.59 2.0947 4.4093 373DNLREGQMV381
45Pis s 1.0102 CAF25233 7.64 2.0673 4.3899 264VDIKEGSLL272
46Pis s 1.0101 CAF25232 7.64 2.0673 4.3899 264VDIKEGSLL272
47Rub i 1.0101 Q0Z8U9 7.70 2.0391 4.3700 75YSITEGDAL83
48Hom s 1 2342526 7.70 2.0386 4.3696 222DSFREGETM230
49Hom s 1.0101 2723284 7.70 2.0386 4.3696 264DSFREGETM272
50Pru du 6.0201 307159114 7.80 1.9831 4.3305 408DEVREGQLF416

Histogram for best protein-peptide similarity index
Number of windows: 1698
Average PD: 11.416184
Standard deviation: 1.824254
1 0.5 1
2 1.0 0
3 1.5 0
4 2.0 0
5 2.5 0
6 3.0 0
7 3.5 0
8 4.0 4
9 4.5 4
10 5.0 10
11 5.5 4
12 6.0 2
13 6.5 4
14 7.0 3
15 7.5 4
16 8.0 12
17 8.5 27
18 9.0 32
19 9.5 107
20 10.0 86
21 10.5 166
22 11.0 149
23 11.5 222
24 12.0 220
25 12.5 219
26 13.0 181
27 13.5 94
28 14.0 46
29 14.5 38
30 15.0 13
31 15.5 27
32 16.0 10
33 16.5 6
34 17.0 2
35 17.5 2
36 18.0 1
37 18.5 0
38 19.0 0
39 19.5 0
40 20.0 1
41 20.5 0

Histogram for all protein-peptide similarity indices
Number of windows: 400198
Average PD: 18.988096
Standard deviation: 2.583933
1 0.5 1
2 1.0 0
3 1.5 0
4 2.0 0
5 2.5 0
6 3.0 0
7 3.5 0
8 4.0 4
9 4.5 4
10 5.0 10
11 5.5 4
12 6.0 2
13 6.5 4
14 7.0 6
15 7.5 6
16 8.0 13
17 8.5 29
18 9.0 41
19 9.5 121
20 10.0 110
21 10.5 245
22 11.0 296
23 11.5 543
24 12.0 886
25 12.5 1344
26 13.0 2022
27 13.5 2899
28 14.0 4388
29 14.5 6002
30 15.0 7922
31 15.5 10941
32 16.0 13379
33 16.5 16814
34 17.0 19754
35 17.5 22257
36 18.0 25182
37 18.5 28046
38 19.0 30816
39 19.5 31213
40 20.0 29783
41 20.5 29274
42 21.0 26404
43 21.5 22681
44 22.0 18871
45 22.5 15103
46 23.0 11898
47 23.5 8306
48 24.0 5413
49 24.5 3376
50 25.0 2092
51 25.5 844
52 26.0 486
53 26.5 212
54 27.0 146
55 27.5 4
Query sequence: RPFREGDLL

SDAP Home Page | Search SDAP | SDAP Manual | SDAP FAQ | Contact  
UTMB | Search | Directories | UTMB Map | News | Employment | Sitemap 
This site published by Ovidiu Ivanciuc
Copyright   2001-2021  The University of Texas Medical Branch. Please review our privacy policy and Internet guidelines.