The University of Texas Medical Branch
Department of Biochemistry and Molecular Biology Sealy Center for Structural Biology Computational Biology


SDAP Home Page
SDAP Overview

Use SDAP
SDAP All
SDAP Food

SDAP Tools
FAO/WHO Allergenicity Test
FASTA Search in SDAP
Peptide Match
Peptide Similarity
Peptide-Protein PD Index
Aller_ML, Allergen Markup Language
List SDAP

About SDAP
General Information
Manual
FAQ
Publications
Who Are We
Advisory Board

Allergy Links

Our Software Tools
MPACK
FANTOM
GETAREA
NOAH/DIAMOD
MASIA
PCPMer
InterProSurf
EpiSearch

Allergen Databases
WHO/IUIS Allergen Nomenclature database
FARRP Allergen Protein Database (University of Nebraska)
Allergen Database for Food Safety (ADFS)
COMPARE database
ALLFAM (Medical University of Vienna)
Allermatch (Wageninen University)

Protein Databases
PDB
MMDB - Entrez
SWISS-PROT
NCBI - Entrez
PIR

Protein Classification
CATH
CE
FSSP
iProClass
ProtoMap
SCOP
TOPS
VAST

Bioinformatics Servers
@TOME
BLAST @ NCBI
BLAST @ PIR
FASTA @ PIR
Peptide Match @ PIR
ClustalW @ BCM
ClustalW @ EMBL - EBI
ClustalW @ PIR

Bioinformatics Tools
Cn3D
MolMol

Bioinformatics Links
Bioinformatics Links Directory

SDAP - All Allergens
Go to: SDAP All allergens       Go to: SDAP Food allergens
Send a comment to Ovidiu Ivanciuc      Submit new allergen information to SDAP
Last Updated: Nov 1, 2021  
Alphabetical listing of allergens: A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
Access to SDAP is available free of charge for Academic and non-profit use.
Licenses for commercial use can be obtained by contacting W. Braun (webraun@utmb.edu).
Secure access to SDAP is available from https://fermi.utmb.edu/SDAP

Search Results: Peptide Similarity

Query peptide: GAMAKKGDE

NoAllergenLink to NCBI/
PIR/SwissProt
PD Sequence
Similarity
Index
z(PD,min)z(PD,all)Start
Residue
Matching regionEnd
Residue
1Phl p 1 P43213 0.00 6.1959 7.3145 136GAMAKKGDE144
2Cyn d 1 O04701 1.04 5.6162 6.9008 114GAMAKKGQE122
3Sor h 1.0101 O04701 1.04 5.6162 6.9008 114GAMAKKGQE122
4Cyn d 1 16076695 1.15 5.5500 6.8536 132GAMAKKGEE140
5Cyn d 1.0202 16076693 1.15 5.5500 6.8536 132GAMAKKGEE140
6Cyn d 1.0203 16076697 1.15 5.5500 6.8536 132GAMAKKGEE140
7Poa p a 4090265 1.15 5.5500 6.8536 136GAMAKKGEE144
8Hol l 1 3860384 1.15 5.5500 6.8536 136GAMAKKGEE144
9Cyn d 1.0201 15384338 1.15 5.5500 6.8536 114GAMAKKGEE122
10Uro m 1.0101 A0A4D6FZ45_9POAL 1.15 5.5500 6.8536 132GAMAKKGEE140
11Uro m 1.0201 A0A4D6G2J8_9POAL 1.15 5.5500 6.8536 99GAMAKKGEE107
12Cyn d 1.0204 10314021 1.15 5.5500 6.8536 114GAMAKKGEE122
13Phl p 1.0101 3901094 1.68 5.2543 6.6425 136GSMAKKGDE144
14Lol p 1 P14946 2.84 4.6085 6.1816 136GSMAKKGEE144
15Hol l 1.0102 1167836 2.84 4.6085 6.1816 121GSMAKKGEE129
16Lol p 1.0102 168314 2.84 4.6085 6.1816 125GSMAKKGEE133
17Hol l 1 P43216 2.84 4.6085 6.1816 138GSMAKKGEE146
18Pha a 1 Q41260 2.84 4.6085 6.1816 142GSMAKKGEE150
19Lol p 1.0101 168316 2.84 4.6085 6.1816 136GSMAKKGEE144
20Lol p 1.0103 6599300 2.84 4.6085 6.1816 136GSMAKKGEE144
21Zoy m 1.0101 QCX36431 3.67 4.1397 5.8471 142GSMAKQGQE150
22Ory s 1 8118439 3.86 4.0380 5.7745 136GAMAKEGKD144
23Ory s 1 8118421 3.98 3.9667 5.7236 136GAMAKDGKD144
24Ory s 1 8118423 5.08 3.3548 5.2869 137GAMAKPGQN145
25Ory s 1 8118432 6.50 2.5581 4.7183 187GAMAKDNRN195
26Ory s 1 8118437 6.85 2.3631 4.5792 138GAMACPGKE146
27Gal d 2 212900 6.87 2.3497 4.5696 272NAMAKKSMK280
28Bos d 3 886209 7.01 2.2741 4.5157 45GACEKRGRD53
29Ory s 1 Q40638 7.03 2.2613 4.5065 133LAMAKDGKD141
30Ory s 1 8118430 7.07 2.2368 4.4891 139GAMAKPGLN147
31Pas n 1.0101 168419914 7.07 2.2368 4.4891 136GAMAKPGLN144
32Cten i 1.0101 QCY53440 7.25 2.1403 4.4202 35GLSAKSGDD43
33Gly m 2 555616 7.30 2.1093 4.3980 144GAMAISGQD152
34Art v 5.0101 62530264 7.33 2.0938 4.3870 14GAFDKNGDG22
35Ole e 14.0101 W8PPL3_OLEEU 7.37 2.0705 4.3704 235GSLGKRPDE243
36Tri r 4.0101 5813788 7.39 2.0617 4.3641 192GTLTKSGDK200
37Asp v 13.0101 294441150 7.39 2.0584 4.3617 134GAISHQGDA142
38Api g 7.0101 QUJ17885 7.44 2.0341 4.3444 75GACHKRGGK83
39Ory s 1 8118428 7.77 1.8455 4.2098 142GAMANRGMG150
40Lat c 6.0201 XP_018553992 7.80 1.8285 4.1977 1012GAAGQKGER1020
41Gal d 3 757851 7.82 1.8174 4.1898 114VAVVKKGTE122
42Gal d 3 P02789 7.82 1.8174 4.1898 114VAVVKKGTE122
43Ory s 1 2224915 7.87 1.7891 4.1696 126GAMARPGLN134
44Pen ch 31.0101 61380693 7.95 1.7464 4.1391 60PSHAKKDDK68
45Pis v 3.0101 133711973 7.98 1.7273 4.1255 296GAIVKASKE304
46Can f 2 O18874 8.01 1.7146 4.1164 15GLQAQEGNH23
47Ran e 2 20797081 8.07 1.6811 4.0925 84SAFLKAGDS92
48Der f 18.0101 27550039 8.07 1.6795 4.0914 149GMQAKDSDN157
49Der p 18.0101 CHL18_DERPT 8.07 1.6795 4.0914 149GMQAKDSDN157
50Vig r 1.0101 Q2VU97 8.08 1.6717 4.0858 21NALAKDADN29

Histogram for best protein-peptide similarity index
Number of windows: 1698
Average PD: 11.070250
Standard deviation: 1.786716
1 0.5 1
2 1.0 0
3 1.5 11
4 2.0 1
5 2.5 0
6 3.0 7
7 3.5 0
8 4.0 3
9 4.5 0
10 5.0 0
11 5.5 1
12 6.0 0
13 6.5 1
14 7.0 2
15 7.5 11
16 8.0 7
17 8.5 22
18 9.0 55
19 9.5 72
20 10.0 127
21 10.5 183
22 11.0 269
23 11.5 289
24 12.0 229
25 12.5 154
26 13.0 107
27 13.5 69
28 14.0 26
29 14.5 18
30 15.0 8
31 15.5 9
32 16.0 3
33 16.5 4
34 17.0 5
35 17.5 1
36 18.0 2
37 18.5 0
38 19.0 0
39 19.5 0

Histogram for all protein-peptide similarity indices
Number of windows: 400198
Average PD: 18.312561
Standard deviation: 2.503610
1 0.5 1
2 1.0 0
3 1.5 11
4 2.0 1
5 2.5 0
6 3.0 7
7 3.5 0
8 4.0 3
9 4.5 0
10 5.0 0
11 5.5 1
12 6.0 0
13 6.5 1
14 7.0 2
15 7.5 11
16 8.0 7
17 8.5 23
18 9.0 61
19 9.5 96
20 10.0 230
21 10.5 313
22 11.0 611
23 11.5 872
24 12.0 1587
25 12.5 2204
26 13.0 2965
27 13.5 4532
28 14.0 6488
29 14.5 8768
30 15.0 10752
31 15.5 14682
32 16.0 17068
33 16.5 20802
34 17.0 24459
35 17.5 27566
36 18.0 29656
37 18.5 30116
38 19.0 31586
39 19.5 30513
40 20.0 29644
41 20.5 26124
42 21.0 22056
43 21.5 18032
44 22.0 13513
45 22.5 9800
46 23.0 6733
47 23.5 3965
48 24.0 2399
49 24.5 1224
50 25.0 487
51 25.5 175
52 26.0 44
Query sequence: GAMAKKGDE

SDAP Home Page | Search SDAP | SDAP Manual | SDAP FAQ | Contact  
UTMB | Search | Directories | UTMB Map | News | Employment | Sitemap 
This site published by Ovidiu Ivanciuc
Copyright   2001-2021  The University of Texas Medical Branch. Please review our privacy policy and Internet guidelines.