The University of Texas Medical Branch
Department of Biochemistry and Molecular Biology Sealy Center for Structural Biology Computational Biology


SDAP Home Page
SDAP Overview

Use SDAP
SDAP All
SDAP Food

SDAP Tools
FAO/WHO Allergenicity Test
FASTA Search in SDAP
Peptide Match
Peptide Similarity
Peptide-Protein PD Index
Aller_ML, Allergen Markup Language
List SDAP

About SDAP
General Information
Manual
FAQ
Publications
Who Are We
Advisory Board

Allergy Links

Our Software Tools
MPACK
FANTOM
GETAREA
NOAH/DIAMOD
MASIA
PCPMer
InterProSurf
EpiSearch

Allergen Databases
WHO/IUIS Allergen Nomenclature database
FARRP Allergen Protein Database (University of Nebraska)
Allergen Database for Food Safety (ADFS)
COMPARE database
ALLFAM (Medical University of Vienna)
Allermatch (Wageninen University)

Protein Databases
PDB
MMDB - Entrez
SWISS-PROT
NCBI - Entrez
PIR

Protein Classification
CATH
CE
FSSP
iProClass
ProtoMap
SCOP
TOPS
VAST

Bioinformatics Servers
@TOME
BLAST @ NCBI
BLAST @ PIR
FASTA @ PIR
Peptide Match @ PIR
ClustalW @ BCM
ClustalW @ EMBL - EBI
ClustalW @ PIR

Bioinformatics Tools
Cn3D
MolMol

Bioinformatics Links
Bioinformatics Links Directory

SDAP - All Allergens
Go to: SDAP All allergens       Go to: SDAP Food allergens
Send a comment to Ovidiu Ivanciuc      Submit new allergen information to SDAP
Last Updated: Nov 1, 2021  
Alphabetical listing of allergens: A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
Access to SDAP is available free of charge for Academic and non-profit use.
Licenses for commercial use can be obtained by contacting W. Braun (webraun@utmb.edu).
Secure access to SDAP is available from https://fermi.utmb.edu/SDAP

Search Results: Peptide Similarity

Query peptide: GKDDKSGGA

NoAllergenLink to NCBI/
PIR/SwissProt
PD Sequence
Similarity
Index
z(PD,min)z(PD,all)Start
Residue
Matching regionEnd
Residue
1Sor h 13.0101 A0A077B155_SORHL 0.00 7.2831 7.2493 35GKDDKSGGA43
2Lat c 6.0201 XP_018553992 4.50 4.4096 5.4584 24GEDDRTGGS32
3Sal s 6.0201 XP_013998297 6.28 3.2675 4.7466 1057GKDGRAGGH1065
4Sal s 6.0202 XP_014033985 6.28 3.2675 4.7466 1057GKDGRAGGH1065
5Sal s 6.0102 XP_014048044 6.29 3.2600 4.7419 151GFDEKSGGG159
6Sal s 6.0101 XP_014059932 6.29 3.2600 4.7419 151GFDEKSGGG159
7Sal s 6.0102 XP_014048044 6.55 3.0945 4.6388 24GEDDRTAGS32
8Sal s 6.0101 XP_014059932 6.55 3.0945 4.6388 24GEDDRTAGS32
9Har a 2.0101 17291858 6.68 3.0134 4.5883 477GTNDKAGGP485
10Rhi o 1.0101 I1CLC6_RHIO9 6.80 2.9348 4.5393 232NKDQDNGGE240
11Der f mag29 666007 6.90 2.8742 4.5015 121GTDGSGGGA129
12Gal d vitellogenin 63887 7.01 2.8032 4.4572 1388SNNKKTGGL1396
13Gal d vitellogenin 212881 7.01 2.8032 4.4572 1390SNNKKTGGL1398
14Aed a 3 O01949 7.10 2.7482 4.4230 111GEEDSTGGD119
15Sal s 6.0102 XP_014048044 7.15 2.7111 4.3998 1109GQSGESGPA1117
16Der f 28.0201 AIO08848 7.17 2.7023 4.3944 188GLDKKGGGE196
17Der p 28.0101 QAT18639 7.17 2.7023 4.3944 188GLDKKGGGE196
18Sal s 6.0201 XP_013998297 7.17 2.7013 4.3937 181GRKGESGTA189
19Sch c 1.0101 D8Q9M3 7.42 2.5428 4.2950 142GRPQRDGPA150
20Lat c 6.0301 XP_018522130 7.44 2.5302 4.2871 1057GKDGRAGSH1065
21Sal s 6.0202 XP_014033985 7.64 2.4006 4.2063 457GKEGPSGAA465
22Sal s 6.0201 XP_013998297 7.64 2.4006 4.2063 457GKEGPSGAA465
23Lat c 6.0101 XP_018521723 7.67 2.3782 4.1924 533GPDGKAGPA541
24Lat c 6.0101 XP_018521723 7.79 2.3065 4.1477 308GNDGNTGAA316
25Can s 4.0101 XP_030482568.1 7.82 2.2839 4.1336 176GKTDSEGGF184
26Lat c 6.0301 XP_018522130 7.84 2.2701 4.1250 466GQDGRSGPP474
27Pla or 1.0101 162949336 7.87 2.2539 4.1149 42GADPKSHSA50
28Lat c 6.0201 XP_018553992 7.88 2.2466 4.1104 964GETGKQGPA972
29Gal d 6.0101 VIT1_CHICK 7.93 2.2137 4.0898 1203SKSNRSSSS1211
30gal d 6.0101 P87498 7.93 2.2137 4.0898 1203SKSNRSSSS1211
31Api m 1 P00630 7.99 2.1797 4.0686 38GHGNKSSGP46
32Pen c 13.0101 4587983 8.00 2.1698 4.0625 234VKDAKSRGA242
33Pen ch 13 6684758 8.00 2.1698 4.0625 234VKDAKSRGA242
34Sal s 6.0101 XP_014059932 8.02 2.1568 4.0544 1049GDRGESGPA1057
35Sal s 6.0102 XP_014048044 8.02 2.1568 4.0544 1049GDRGESGPA1057
36Lat c 6.0101 XP_018521723 8.02 2.1568 4.0544 1049GDRGESGPA1057
37Sco m 5.0101 QEA69430 8.02 2.1555 4.0536 200GKSSKYPGL208
38Aed a 5.0101 Q16XK7_AEDAE 8.04 2.1451 4.0471 152DEDNKRGGI160
39Sal s 6.0202 XP_014033985 8.10 2.1061 4.0228 583GERGNSGPA591
40Sal s 6.0201 XP_013998297 8.10 2.1061 4.0228 583GERGNSGPA591
41Aed al 3.01 AAV90693 8.12 2.0960 4.0165 129SKEESTGGD137
42Ara h 4 5712199 8.14 2.0817 4.0076 337GRGSRGGGN345
43Der p 26.0101 QAT18638 8.15 2.0769 4.0046 74VKKDKDCGA82
44Der f 26.0101 AIO08852 8.15 2.0769 4.0046 74VKKDKDCGA82
45Jug n 4.0101 JUGN4_JUGNI 8.17 2.0599 3.9940 226GQQQRGSGN234
46Gal d 1 P01005 8.21 2.0356 3.9789 179GSDNKTYGN187
47For t 1.0101 188572341 8.28 1.9906 3.9508 107NSNDNQSGA115
48Act c 2 190358875 8.29 1.9864 3.9482 203PKDDQTSTF211
49Der f 14 1545803 8.30 1.9809 3.9448 129SSKDKNSGV137
50Lup an 1.0101 169950562 8.30 1.9768 3.9422 395GKPSESGPF403

Histogram for best protein-peptide similarity index
Number of windows: 1698
Average PD: 11.395616
Standard deviation: 1.564658
1 0.5 1
2 1.0 0
3 1.5 0
4 2.0 0
5 2.5 0
6 3.0 0
7 3.5 0
8 4.0 0
9 4.5 1
10 5.0 0
11 5.5 0
12 6.0 0
13 6.5 4
14 7.0 3
15 7.5 7
16 8.0 6
17 8.5 25
18 9.0 41
19 9.5 99
20 10.0 114
21 10.5 170
22 11.0 185
23 11.5 233
24 12.0 216
25 12.5 199
26 13.0 167
27 13.5 116
28 14.0 56
29 14.5 20
30 15.0 8
31 15.5 12
32 16.0 7
33 16.5 3
34 17.0 1
35 17.5 2
36 18.0 1
37 18.5 0
38 19.0 0

Histogram for all protein-peptide similarity indices
Number of windows: 400198
Average PD: 18.199666
Standard deviation: 2.510537
1 0.5 1
2 1.0 0
3 1.5 0
4 2.0 0
5 2.5 0
6 3.0 0
7 3.5 0
8 4.0 0
9 4.5 1
10 5.0 0
11 5.5 0
12 6.0 0
13 6.5 4
14 7.0 5
15 7.5 9
16 8.0 11
17 8.5 39
18 9.0 69
19 9.5 191
20 10.0 291
21 10.5 416
22 11.0 677
23 11.5 1033
24 12.0 1718
25 12.5 2361
26 13.0 3302
27 13.5 4935
28 14.0 6507
29 14.5 9139
30 15.0 11135
31 15.5 14674
32 16.0 18266
33 16.5 21744
34 17.0 25417
35 17.5 27901
36 18.0 31151
37 18.5 31584
38 19.0 31989
39 19.5 30911
40 20.0 28117
41 20.5 24487
42 21.0 20616
43 21.5 15942
44 22.0 12423
45 22.5 8743
46 23.0 6037
47 23.5 3563
48 24.0 2447
49 24.5 1309
50 25.0 593
51 25.5 301
52 26.0 104
53 26.5 30
54 27.0 4
Query sequence: GKDDKSGGA

SDAP Home Page | Search SDAP | SDAP Manual | SDAP FAQ | Contact  
UTMB | Search | Directories | UTMB Map | News | Employment | Sitemap 
This site published by Ovidiu Ivanciuc
Copyright   2001-2021  The University of Texas Medical Branch. Please review our privacy policy and Internet guidelines.