The University of Texas Medical Branch
Department of Biochemistry and Molecular Biology Sealy Center for Structural Biology Computational Biology


SDAP Home Page
SDAP Overview

Use SDAP
SDAP All
SDAP Food

SDAP Tools
FAO/WHO Allergenicity Test
FASTA Search in SDAP
Peptide Match
Peptide Similarity
Peptide-Protein PD Index
Aller_ML, Allergen Markup Language
List SDAP

About SDAP
General Information
Manual
FAQ
Publications
Who Are We
Advisory Board

Allergy Links

Our Software Tools
MPACK
FANTOM
GETAREA
NOAH/DIAMOD
MASIA
PCPMer
InterProSurf
EpiSearch

Allergen Databases
WHO/IUIS Allergen Nomenclature database
FARRP Allergen Protein Database (University of Nebraska)
Allergen Database for Food Safety (ADFS)
COMPARE database
ALLFAM (Medical University of Vienna)
Allermatch (Wageninen University)

Protein Databases
PDB
MMDB - Entrez
SWISS-PROT
NCBI - Entrez
PIR

Protein Classification
CATH
CE
FSSP
iProClass
ProtoMap
SCOP
TOPS
VAST

Bioinformatics Servers
@TOME
BLAST @ NCBI
BLAST @ PIR
FASTA @ PIR
Peptide Match @ PIR
ClustalW @ BCM
ClustalW @ EMBL - EBI
ClustalW @ PIR

Bioinformatics Tools
Cn3D
MolMol

Bioinformatics Links
Bioinformatics Links Directory

SDAP - All Allergens
Go to: SDAP All allergens       Go to: SDAP Food allergens
Send a comment to Ovidiu Ivanciuc      Submit new allergen information to SDAP
Last Updated: Nov 1, 2021  
Alphabetical listing of allergens: A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
Access to SDAP is available free of charge for Academic and non-profit use.
Licenses for commercial use can be obtained by contacting W. Braun (webraun@utmb.edu).
Secure access to SDAP is available from https://fermi.utmb.edu/SDAP

Search Results: Peptide Similarity

Query peptide: GKNQPGCNE

NoAllergenLink to NCBI/
PIR/SwissProt
PD Sequence
Similarity
Index
z(PD,min)z(PD,all)Start
Residue
Matching regionEnd
Residue
1Pol a 1 Q9U6W0 0.00 6.9848 7.5425 214GKNQPGCNE222
2Pol e 1.0101 3989146 0.87 6.4478 7.1803 216GKSQPGCNE224
3Pol d 1.0101 45510887 1.74 5.9108 6.8181 250GKSQPGCSE258
4Pol d 1.0102 45510889 1.74 5.9108 6.8181 229GKSQPGCSE237
5Pol d 1.0104 45510893 1.74 5.9108 6.8181 229GKSQPGCSE237
6Pol d 1.0103 45510891 1.74 5.9108 6.8181 229GKSQPGCSE237
7Ves v 1 P49369 3.52 4.8172 6.0806 249GKNQPGCGR257
8Ves m 1 P51528 4.48 4.2231 5.6800 213GKNNPGCGR221
9Dol m 1.02 P53357 5.92 3.3341 5.0804 216GSNQPGCTY224
10Dol m 1.0101 Q06478 6.30 3.0999 4.9225 230GSNQPGCRY238
11Ves s 1.0101 3989146 6.44 3.0136 4.8642 210GNNQPGCGI218
12Sol i 3 P35778 6.76 2.8162 4.7311 144GKNKSTPNE152
13Ara h 11.0101 Q45W87 6.77 2.8097 4.7267 100GKHPPGANQ108
14Poly p 1.0101 124518469 6.79 2.8012 4.7210 232GSHQPGCGR240
15Vesp c 1.0101 124518469 6.87 2.7504 4.6868 213GYNQPGCGL221
16Sol i 1.0101 51093373 6.94 2.7056 4.6565 243GKSQPACSW251
17Phod s 1.0101 OBP_PHOSU 7.08 2.6242 4.6016 113GKSQPLTPE121
18Equ c 6.01 LYSC1_HORSE 7.34 2.4637 4.4934 45GKNANGSSD53
19Equ a 6.01 XP_014705584 7.34 2.4637 4.4934 64GKNANGSSD72
20Ses i 5 5381321 7.43 2.4051 4.4539 104GKHPPGADQ112
21Vesp v 1.0101 PA1_VESVE 7.44 2.3999 4.4504 216GYNQPGCYY224
22Gos h 2 P09799 7.45 2.3924 4.4453 579GRDRRGFDE587
23Tri a glutenin 21751 7.50 2.3635 4.4258 462GQGQPGQRQ470
24Tri a glutenin 21779 7.50 2.3635 4.4258 474GQGQPGQRQ482
25Der f 6 P49276 7.50 2.3635 4.4258 223DKTQSGCNG231
26Ana o 2 25991543 7.50 2.3619 4.4247 95GISYPGCPE103
27Sin a 2.0101 Q2TLW0 7.66 2.2624 4.3576 234GNNQQGSSQ242
28Pol a 1 Q9U6W0 7.70 2.2386 4.3416 219GCNEPSCSH227
29Tri a glutenin 32968199 7.76 2.2022 4.3170 532GQGQPGYDP540
30Tri a 26.0101 P10388 7.76 2.2022 4.3170 532GQGQPGYDP540
31Tri a glutenin 736319 7.76 2.2022 4.3170 537GQGQPGYDP545
32Tri a gliadin 170732 7.76 2.2019 4.3169 37NNNSPGHNN45
33Car i 4.0101 158998780 7.83 2.1592 4.2881 312GRDDNGLEE320
34Jug r 4.0101 Q2TPW5 7.83 2.1592 4.2881 311GRDDNGLEE319
35Jug n 4.0101 JUGN4_JUGNI 7.83 2.1592 4.2881 314GRDDNGLEE322
36Pon l 7.0101 P05547 7.97 2.0747 4.2310 83PKNLDGANE91
37Hev b 2 1184668 8.01 2.0504 4.2147 46GNNLPPVSE54
38Gly m 6.0301 P11828 8.02 2.0437 4.2102 292SQSRNGIDE300
39Tri a glutenin 22090 8.04 2.0313 4.2018 301SQQQPGQGQ309
40Tri a glutenin 21751 8.04 2.0313 4.2018 283SQQQPGQGQ291
41Tri a glutenin 21751 8.04 2.0313 4.2018 343SQQQPGQGQ351
42Tri a glutenin 22090 8.04 2.0313 4.2018 331SQQQPGQGQ339
43Tri a glutenin 22090 8.04 2.0313 4.2018 316SQQQPGQGQ324
44Tri a glutenin 21779 8.04 2.0313 4.2018 355SQQQPGQGQ363
45Tri a glutenin 22090 8.04 2.0313 4.2018 361SQQQPGQGQ369
46Tri a glutenin 22090 8.04 2.0313 4.2018 346SQQQPGQGQ354
47Tri a glutenin 21751 8.04 2.0313 4.2018 298SQQQPGQGQ306
48Tri a glutenin 21751 8.04 2.0313 4.2018 313SQQQPGQGQ321
49Tri a glutenin 21779 8.04 2.0313 4.2018 325SQQQPGQGQ333
50Tri a glutenin 21779 8.04 2.0313 4.2018 310SQQQPGQGQ318

Histogram for best protein-peptide similarity index
Number of windows: 1698
Average PD: 11.334175
Standard deviation: 1.622687
1 0.5 1
2 1.0 1
3 1.5 0
4 2.0 4
5 2.5 0
6 3.0 0
7 3.5 0
8 4.0 1
9 4.5 1
10 5.0 0
11 5.5 0
12 6.0 1
13 6.5 2
14 7.0 5
15 7.5 9
16 8.0 10
17 8.5 20
18 9.0 37
19 9.5 63
20 10.0 129
21 10.5 159
22 11.0 198
23 11.5 211
24 12.0 338
25 12.5 168
26 13.0 137
27 13.5 89
28 14.0 45
29 14.5 30
30 15.0 18
31 15.5 7
32 16.0 3
33 16.5 5
34 17.0 3
35 17.5 1
36 18.0 0
37 18.5 1
38 19.0 0
39 19.5 0
40 20.0 0
41 20.5 0

Histogram for all protein-peptide similarity indices
Number of windows: 400198
Average PD: 18.147900
Standard deviation: 2.406096
1 0.5 1
2 1.0 1
3 1.5 0
4 2.0 4
5 2.5 0
6 3.0 0
7 3.5 0
8 4.0 1
9 4.5 1
10 5.0 0
11 5.5 0
12 6.0 1
13 6.5 2
14 7.0 5
15 7.5 9
16 8.0 11
17 8.5 37
18 9.0 48
19 9.5 152
20 10.0 213
21 10.5 303
22 11.0 520
23 11.5 978
24 12.0 1401
25 12.5 2125
26 13.0 3448
27 13.5 4399
28 14.0 5979
29 14.5 8366
30 15.0 12075
31 15.5 14425
32 16.0 18242
33 16.5 22753
34 17.0 26651
35 17.5 29262
36 18.0 32002
37 18.5 33345
38 19.0 33000
39 19.5 32030
40 20.0 28445
41 20.5 24920
42 21.0 19598
43 21.5 15567
44 22.0 11082
45 22.5 7546
46 23.0 5412
47 23.5 2887
48 24.0 1485
49 24.5 883
50 25.0 404
51 25.5 127
52 26.0 45
Query sequence: GKNQPGCNE

SDAP Home Page | Search SDAP | SDAP Manual | SDAP FAQ | Contact  
UTMB | Search | Directories | UTMB Map | News | Employment | Sitemap 
This site published by Ovidiu Ivanciuc
Copyright   2001-2021  The University of Texas Medical Branch. Please review our privacy policy and Internet guidelines.