The University of Texas Medical Branch
Department of Biochemistry and Molecular Biology Sealy Center for Structural Biology Computational Biology


SDAP Home Page
SDAP Overview

Use SDAP
SDAP All
SDAP Food

SDAP Tools
FAO/WHO Allergenicity Test
FASTA Search in SDAP
Peptide Match
Peptide Similarity
Peptide-Protein PD Index
Aller_ML, Allergen Markup Language
List SDAP

About SDAP
General Information
Manual
FAQ
Publications
Who Are We
Advisory Board

Allergy Links

Our Software Tools
MPACK
FANTOM
GETAREA
NOAH/DIAMOD
MASIA
PCPMer
InterProSurf
EpiSearch

Allergen Databases
WHO/IUIS Allergen Nomenclature database
FARRP Allergen Protein Database (University of Nebraska)
Allergen Database for Food Safety (ADFS)
COMPARE database
ALLFAM (Medical University of Vienna)
Allermatch (Wageninen University)

Protein Databases
PDB
MMDB - Entrez
SWISS-PROT
NCBI - Entrez
PIR

Protein Classification
CATH
CE
FSSP
iProClass
ProtoMap
SCOP
TOPS
VAST

Bioinformatics Servers
@TOME
BLAST @ NCBI
BLAST @ PIR
FASTA @ PIR
Peptide Match @ PIR
ClustalW @ BCM
ClustalW @ EMBL - EBI
ClustalW @ PIR

Bioinformatics Tools
Cn3D
MolMol

Bioinformatics Links
Bioinformatics Links Directory

SDAP - All Allergens
Go to: SDAP All allergens       Go to: SDAP Food allergens
Send a comment to Ovidiu Ivanciuc      Submit new allergen information to SDAP
Last Updated: Nov 1, 2021  
Alphabetical listing of allergens: A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
Access to SDAP is available free of charge for Academic and non-profit use.
Licenses for commercial use can be obtained by contacting W. Braun (webraun@utmb.edu).
Secure access to SDAP is available from https://fermi.utmb.edu/SDAP

Search Results: Peptide Similarity

Query peptide: GKSQPACSW

NoAllergenLink to NCBI/
PIR/SwissProt
PD Sequence
Similarity
Index
z(PD,min)z(PD,all)Start
Residue
Matching regionEnd
Residue
1Sol i 1.0101 51093373 0.00 8.0289 8.1787 243GKSQPACSW251
2Pol d 1.0103 45510891 5.20 4.4871 5.8339 229GKSQPGCSE237
3Pol d 1.0101 45510887 5.20 4.4871 5.8339 250GKSQPGCSE258
4Pol d 1.0104 45510893 5.20 4.4871 5.8339 229GKSQPGCSE237
5Pol d 1.0102 45510889 5.20 4.4871 5.8339 229GKSQPGCSE237
6Pol e 1.0101 3989146 6.07 3.8937 5.4410 216GKSQPGCNE224
7Dol m 1.02 P53357 6.70 3.4655 5.1575 216GSNQPGCTY224
8Ves v 1 P49369 6.88 3.3440 5.0771 249GKNQPGCGR257
9Pol a 1 Q9U6W0 6.94 3.3003 5.0482 214GKNQPGCNE222
10Cop c 1 4538529 7.02 3.2459 5.0122 65SQGNPACSP73
11Ves s 1.0101 3989146 7.31 3.0532 4.8845 210GNNQPGCGI218
12Hel a 3.0101 P82007 7.64 2.8289 4.7361 47GKPTPACCA55
13Pol d 1.0101 45510887 7.78 2.7309 4.6712 255GCSEPSCSH263
14Pol d 1.0104 45510893 7.78 2.7309 4.6712 234GCSEPSCSH242
15Pol d 1.0103 45510891 7.78 2.7309 4.6712 234GCSEPSCSH242
16Pol d 1.0102 45510889 7.78 2.7309 4.6712 234GCSEPSCSH242
17Cari p 2.0101 PAPA2_CARPA 7.82 2.7062 4.6549 332GNSQGTCGV340
18Ves m 1 P51528 7.84 2.6876 4.6425 213GKNNPGCGR221
19Phod s 1.0101 OBP_PHOSU 7.88 2.6659 4.6282 113GKSQPLTPE121
20Dol m 1.0101 Q06478 7.93 2.6299 4.6043 230GSNQPGCRY238
21Gly m lectin 170006 7.98 2.5928 4.5798 250GESHDVLSW258
22Hom s 1.0101 2723284 8.20 2.4455 4.4823 790GKSMNANTI798
23Hom s 1 2342526 8.20 2.4455 4.4823 747GKSMNANTI755
24Api m 9.0101 226533687 8.27 2.3944 4.4484 205GKYVPAVSH213
25Jug n 2 31321944 8.39 2.3177 4.3976 467GRDHPLASI475
26Jug r 2 6580762 8.39 2.3177 4.3976 579GRDHPLASI587
27Car i 2.0101 VCL_CARIL 8.39 2.3177 4.3976 777GRDHPLASI785
28Cup s 2.0101 PGLR_CUPSE 8.46 2.2699 4.3660 114GNSRSEVSF122
29Jun a 2 9955725 8.46 2.2699 4.3660 289GNSRSEVSF297
30Vesp c 1.0101 9955725 8.47 2.2642 4.3622 213GYNQPGCGL221
31Gal d 4 63426 8.48 2.2515 4.3538 3GKNDPMCLV11
32Gly m 7.0101 C6K8D1_SOYBN 8.49 2.2491 4.3522 47GKDTPQGSI55
33Sal k 1.0201 51242679 8.50 2.2397 4.3460 122PKNRPTITF130
34Sal k 1.0301 59895730 8.50 2.2397 4.3460 99PKNRPTITF107
35Sal k 1.0302 59895728 8.50 2.2397 4.3460 99PKNRPTITF107
36Der f 28.0201 AIO08848 8.51 2.2307 4.3400 436ADNQPAVTI444
37Der p 28.0101 QAT18639 8.51 2.2307 4.3400 436ADNQPAVTI444
38Tri a gliadin 21673 8.57 2.1901 4.3131 115PQSQPQYSQ123
39Act d 5.0101 P84527 8.64 2.1438 4.2825 58GKSYPTYDC66
40Pol a 1 Q9U6W0 8.65 2.1375 4.2783 219GCNEPSCSH227
41Pis v 5.0101 171853009 8.68 2.1161 4.2641 27GQQQNECQI35
42Mala s 12.0101 78038796 8.69 2.1100 4.2601 204GTTWPAVTY212
43Gal d vitellogenin 212881 8.71 2.0946 4.2499 214TKGTTAFSY222
44Gal d vitellogenin 63887 8.71 2.0946 4.2499 214TKGTTAFSY222
45Tri a 17.0101 AMYB_WHEAT 8.75 2.0675 4.2320 59GKGPKAYDW67
46Vesp v 1.0101 PA1_VESVE 8.76 2.0665 4.2313 216GYNQPGCYY224
47Pis v 3.0101 133711973 8.87 1.9867 4.1785 323GKSTGTFNL331
48Coc n 1.0101 A0A0S3B0K0_COCNU 8.96 1.9304 4.1412 423GKSSLLHSM431
49Api m 7 22724911 8.97 1.9237 4.1368 339AKGKDACQM347
50Aed al 3.01 AAV90693 9.07 1.8551 4.0914 150GENDPVNTY158

Histogram for best protein-peptide similarity index
Number of windows: 1698
Average PD: 11.790254
Standard deviation: 1.468480
1 0.5 1
2 1.0 0
3 1.5 0
4 2.0 0
5 2.5 0
6 3.0 0
7 3.5 0
8 4.0 0
9 4.5 0
10 5.0 0
11 5.5 4
12 6.0 0
13 6.5 1
14 7.0 3
15 7.5 2
16 8.0 6
17 8.5 11
18 9.0 16
19 9.5 27
20 10.0 80
21 10.5 126
22 11.0 192
23 11.5 249
24 12.0 275
25 12.5 174
26 13.0 202
27 13.5 130
28 14.0 87
29 14.5 85
30 15.0 10
31 15.5 9
32 16.0 5
33 16.5 1
34 17.0 0
35 17.5 0
36 18.0 1
37 18.5 0
38 19.0 0
39 19.5 0
40 20.0 0

Histogram for all protein-peptide similarity indices
Number of windows: 400198
Average PD: 18.141063
Standard deviation: 2.218081
1 0.5 1
2 1.0 0
3 1.5 0
4 2.0 0
5 2.5 0
6 3.0 0
7 3.5 0
8 4.0 0
9 4.5 0
10 5.0 0
11 5.5 4
12 6.0 0
13 6.5 1
14 7.0 3
15 7.5 2
16 8.0 10
17 8.5 11
18 9.0 17
19 9.5 31
20 10.0 92
21 10.5 161
22 11.0 380
23 11.5 608
24 12.0 1135
25 12.5 1543
26 13.0 2333
27 13.5 3757
28 14.0 5777
29 14.5 8056
30 15.0 10859
31 15.5 14140
32 16.0 17683
33 16.5 22312
34 17.0 27404
35 17.5 30850
36 18.0 34335
37 18.5 36168
38 19.0 35767
39 19.5 33970
40 20.0 30171
41 20.5 25790
42 21.0 20271
43 21.5 14871
44 22.0 9728
45 22.5 5944
46 23.0 3515
47 23.5 1449
48 24.0 627
49 24.5 311
50 25.0 96
51 25.5 13
Query sequence: GKSQPACSW

SDAP Home Page | Search SDAP | SDAP Manual | SDAP FAQ | Contact  
UTMB | Search | Directories | UTMB Map | News | Employment | Sitemap 
This site published by Ovidiu Ivanciuc
Copyright   2001-2021  The University of Texas Medical Branch. Please review our privacy policy and Internet guidelines.