The University of Texas Medical Branch
Department of Biochemistry and Molecular Biology Sealy Center for Structural Biology Computational Biology


SDAP Home Page
SDAP Overview

Use SDAP
SDAP All
SDAP Food

SDAP Tools
FAO/WHO Allergenicity Test
FASTA Search in SDAP
Peptide Match
Peptide Similarity
Peptide-Protein PD Index
Aller_ML, Allergen Markup Language
List SDAP

About SDAP
General Information
Manual
FAQ
Publications
Who Are We
Advisory Board

Allergy Links

Our Software Tools
MPACK
FANTOM
GETAREA
NOAH/DIAMOD
MASIA
PCPMer
InterProSurf
EpiSearch

Allergen Databases
WHO/IUIS Allergen Nomenclature database
FARRP Allergen Protein Database (University of Nebraska)
Allergen Database for Food Safety (ADFS)
COMPARE database
ALLFAM (Medical University of Vienna)
Allermatch (Wageninen University)

Protein Databases
PDB
MMDB - Entrez
SWISS-PROT
NCBI - Entrez
PIR

Protein Classification
CATH
CE
FSSP
iProClass
ProtoMap
SCOP
TOPS
VAST

Bioinformatics Servers
@TOME
BLAST @ NCBI
BLAST @ PIR
FASTA @ PIR
Peptide Match @ PIR
ClustalW @ BCM
ClustalW @ EMBL - EBI
ClustalW @ PIR

Bioinformatics Tools
Cn3D
MolMol

Bioinformatics Links
Bioinformatics Links Directory

SDAP - All Allergens
Go to: SDAP All allergens       Go to: SDAP Food allergens
Send a comment to Ovidiu Ivanciuc      Submit new allergen information to SDAP
Last Updated: Nov 1, 2021  
Alphabetical listing of allergens: A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
Access to SDAP is available free of charge for Academic and non-profit use.
Licenses for commercial use can be obtained by contacting W. Braun (webraun@utmb.edu).
Secure access to SDAP is available from https://fermi.utmb.edu/SDAP

Search Results: Peptide Similarity

Query peptide: GNKFVAPDF

NoAllergenLink to NCBI/
PIR/SwissProt
PD Sequence
Similarity
Index
z(PD,min)z(PD,all)Start
Residue
Matching regionEnd
Residue
1Amb a 2 P27762 0.00 6.9786 7.2682 310GNKFVAPDF318
2Amb a 1 P28744 4.14 4.3971 5.6476 306GNRFLASDI314
3Hel a 6.0101 A0A251RNJ1_HELAN 4.93 3.9021 5.3368 307GNRFLAPDD315
4Amb a 1 166443 4.93 3.9021 5.3368 310GNRFLAPDD318
5Amb a 1 P27761 4.93 3.9021 5.3368 310GNRFLAPDD318
6Amb a 1 P27760 5.24 3.7094 5.2159 311GNRFFAPDD319
7Amb a 1 P27759 5.53 3.5312 5.1040 309GNRFCAPDE317
8Ory s 1 11346546 5.68 3.4382 5.0456 244GKTLVAPDV252
9Mala s 12.0101 78038796 6.41 2.9786 4.7571 86NDKFVVPDA94
10Der f 13.0101 37958167 6.52 2.9095 4.7137 89DNKFVQTQF97
11Der p 13.0101 E0A8N8_DERPT 6.52 2.9095 4.7137 89DNKFVQTQF97
12Plo i 2.0101 308193268 6.60 2.8599 4.6826 19GDKLVVIDF27
13Zea m 1 Q07154 6.64 2.8358 4.6675 165GKKVIAKDI173
14Art v 6.0101 62530262 6.71 2.7911 4.6394 309GNRFHAPND317
15Pas n 1.0101 168419914 6.78 2.7490 4.6129 240GKKVIAQDV248
16Per a 2.0101 E7BQV5_PERAM 6.79 2.7457 4.6109 226GNEVVATDQ234
17Mala s 13.0101 91680611 6.84 2.7137 4.5908 16GDKVVVIDF24
18Ory s 1 8118439 6.84 2.7129 4.5903 241DQKLVANDV249
19Gly m lectin 170006 7.03 2.5951 4.5164 149GDQVVAVEF157
20Gly m 2 555616 7.09 2.5562 4.4919 250GQTIVANNV258
21Zea m 1 P58738 7.10 2.5505 4.4884 243GKKVIAKDV251
22Der f 29.0101 A1KXG2_DERFA 7.16 2.5108 4.4634 80GNKFADENF88
23Ses i 6.0101 Q9XHP0 7.17 2.5080 4.4616 333SNALVSPDW341
24Cry j 1.0101 P18632 7.31 2.4167 4.4043 286GNSFTAPNE294
25Cup s 1.0102 8101713 7.31 2.4167 4.4043 286GNSFTAPNE294
26Cry j 1.0102 493634 7.31 2.4167 4.4043 286GNSFTAPNE294
27Cup s 1.0103 8101715 7.31 2.4167 4.4043 286GNSFTAPNE294
28Jun v 1.0101 Q9LLT1 7.31 2.4167 4.4043 286GNSFTAPNE294
29Cup a 1 Q9SCG9 7.31 2.4167 4.4043 265GNSFTAPNE273
30Jun v 1.0102 8843917 7.31 2.4167 4.4043 286GNSFTAPNE294
31Cry j 1.0103 19570317 7.31 2.4167 4.4043 286GNSFTAPNE294
32Cuc ma 4.0101 11SB_CUCMA 7.35 2.3938 4.3899 352SNAMVAPHY360
33Ory s 1 8118423 7.36 2.3901 4.3877 241GKQLVASQV249
34Cup s 1.0101 8101711 7.37 2.3797 4.3811 286GNSFAAPNE294
35Cup s 1.0104 8101717 7.37 2.3797 4.3811 286GNSFAAPNE294
36Cup s 1.0105 8101719 7.37 2.3797 4.3811 286GNSFAAPNE294
37Bla g 8.0101 88657350 7.40 2.3648 4.3718 148GDKFSADEV156
38Aed a 8.0101 Q1HR69_AEDAE 7.41 2.3578 4.3673 136GDKVFAPEE144
39Cha o 1 Q96385 7.45 2.3319 4.3511 286GNSFTAPND294
40Blo t 8.0101 C8CGT7_BLOTA 7.48 2.3153 4.3407 156GSQWVAGDK164
41Ber e 2 30313867 7.57 2.2560 4.3034 208GQQILADNV216
42Pen m 13.0101 Q1KS35_PENMO 7.59 2.2469 4.2977 88GNKLVHKQV96
43Per a 3.0101 Q25641 7.59 2.2441 4.2960 657SNDFYTPNM665
44Der f 30.0101 L7UZ91_DERFA 7.64 2.2156 4.2781 73GGRIVLDDI81
45Ory s TAI 1398916 7.66 2.2004 4.2685 3SNKVVIPAL11
46Cry j 2 506858 7.68 2.1900 4.2620 98SKKFVVNNL106
47Asp f 11 5019414 7.82 2.1013 4.2063 90GDKFADENF98
48Ory s 1 8118425 7.84 2.0865 4.1970 260GKTLVANNV268
49Ory s 1 8118430 7.84 2.0865 4.1970 249GKTLVANNV257
50Bla g 3.0101 D0VNY7_BLAGE 7.90 2.0537 4.1765 631SYDFVTPNM639

Histogram for best protein-peptide similarity index
Number of windows: 1698
Average PD: 11.188028
Standard deviation: 1.603184
1 0.5 1
2 1.0 0
3 1.5 0
4 2.0 0
5 2.5 0
6 3.0 0
7 3.5 0
8 4.0 0
9 4.5 1
10 5.0 3
11 5.5 1
12 6.0 2
13 6.5 1
14 7.0 9
15 7.5 22
16 8.0 28
17 8.5 26
18 9.0 55
19 9.5 75
20 10.0 112
21 10.5 172
22 11.0 212
23 11.5 189
24 12.0 241
25 12.5 231
26 13.0 132
27 13.5 122
28 14.0 34
29 14.5 9
30 15.0 11
31 15.5 4
32 16.0 1
33 16.5 2
34 17.0 0
35 17.5 0
36 18.0 1
37 18.5 0
38 19.0 0
39 19.5 0
40 20.0 0
41 20.5 0
42 21.0 0
43 21.5 0

Histogram for all protein-peptide similarity indices
Number of windows: 400198
Average PD: 18.561098
Standard deviation: 2.553731
1 0.5 1
2 1.0 0
3 1.5 0
4 2.0 0
5 2.5 0
6 3.0 0
7 3.5 0
8 4.0 0
9 4.5 1
10 5.0 3
11 5.5 1
12 6.0 2
13 6.5 1
14 7.0 9
15 7.5 22
16 8.0 28
17 8.5 26
18 9.0 63
19 9.5 83
20 10.0 177
21 10.5 307
22 11.0 474
23 11.5 660
24 12.0 1177
25 12.5 1876
26 13.0 2539
27 13.5 4019
28 14.0 5595
29 14.5 7712
30 15.0 10694
31 15.5 12592
32 16.0 16350
33 16.5 19068
34 17.0 22749
35 17.5 25262
36 18.0 28104
37 18.5 29812
38 19.0 31318
39 19.5 31011
40 20.0 30119
41 20.5 26644
42 21.0 23372
43 21.5 18833
44 22.0 15597
45 22.5 11817
46 23.0 8557
47 23.5 5733
48 24.0 3667
49 24.5 2190
50 25.0 973
51 25.5 671
52 26.0 188
53 26.5 82
54 27.0 16
Query sequence: GNKFVAPDF

SDAP Home Page | Search SDAP | SDAP Manual | SDAP FAQ | Contact  
UTMB | Search | Directories | UTMB Map | News | Employment | Sitemap 
This site published by Ovidiu Ivanciuc
Copyright   2001-2021  The University of Texas Medical Branch. Please review our privacy policy and Internet guidelines.