The University of Texas Medical Branch
Department of Biochemistry and Molecular Biology Sealy Center for Structural Biology Computational Biology


SDAP Home Page
SDAP Overview

Use SDAP
SDAP All
SDAP Food

SDAP Tools
FAO/WHO Allergenicity Test
FASTA Search in SDAP
Peptide Match
Peptide Similarity
Peptide-Protein PD Index
Aller_ML, Allergen Markup Language
List SDAP

About SDAP
General Information
Manual
FAQ
Publications
Who Are We
Advisory Board

Allergy Links

Our Software Tools
MPACK
FANTOM
GETAREA
NOAH/DIAMOD
MASIA
PCPMer
InterProSurf
EpiSearch

Allergen Databases
WHO/IUIS Allergen Nomenclature database
FARRP Allergen Protein Database (University of Nebraska)
Allergen Database for Food Safety (ADFS)
COMPARE database
ALLFAM (Medical University of Vienna)
Allermatch (Wageninen University)

Protein Databases
PDB
MMDB - Entrez
SWISS-PROT
NCBI - Entrez
PIR

Protein Classification
CATH
CE
FSSP
iProClass
ProtoMap
SCOP
TOPS
VAST

Bioinformatics Servers
@TOME
BLAST @ NCBI
BLAST @ PIR
FASTA @ PIR
Peptide Match @ PIR
ClustalW @ BCM
ClustalW @ EMBL - EBI
ClustalW @ PIR

Bioinformatics Tools
Cn3D
MolMol

Bioinformatics Links
Bioinformatics Links Directory

SDAP - All Allergens
Go to: SDAP All allergens       Go to: SDAP Food allergens
Send a comment to Ovidiu Ivanciuc      Submit new allergen information to SDAP
Last Updated: Nov 1, 2021  
Alphabetical listing of allergens: A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
Access to SDAP is available free of charge for Academic and non-profit use.
Licenses for commercial use can be obtained by contacting W. Braun (webraun@utmb.edu).
Secure access to SDAP is available from https://fermi.utmb.edu/SDAP

Search Results: Peptide Similarity

Query peptide: GPGTIKKIS

NoAllergenLink to NCBI/
PIR/SwissProt
PD Sequence
Similarity
Index
z(PD,min)z(PD,all)Start
Residue
Matching regionEnd
Residue
1Bet v 1.0801 452740 0.00 2.8505 6.8925 50GPGTIKKIS58
2Pha v 1 21044 0.00 2.8505 6.8925 50GPGTIKKIS58
3Pha v 1 21048 0.00 2.8505 6.8925 49GPGTIKKIS57
4Bet v 1.2301 2414158 0.00 2.8505 6.8925 50GPGTIKKIS58
5Bet v 1.3001 1542873 0.00 2.8505 6.8925 50GPGTIKKIS58
6Bet v 1 2564226 0.00 2.8505 6.8925 50GPGTIKKIS58
7Bet v 1.2401 1542861 0.00 2.8505 6.8925 50GPGTIKKIS58
8Bet v 1.2501 1542863 0.00 2.8505 6.8925 50GPGTIKKIS58
9Bet v 1.0101 17938 0.00 2.8505 6.8925 50GPGTIKKIS58
10Bet v 1 2564224 0.00 2.8505 6.8925 50GPGTIKKIS58
11Bet v 1.at5 4006965 0.00 2.8505 6.8925 50GPGTIKKIS58
12Bet v 1.at8 4006928 0.00 2.8505 6.8925 50GPGTIKKIS58
13Bet v 1.at14 4006947 0.00 2.8505 6.8925 50GPGTIKKIS58
14Bet v 1.2901 1542871 0.00 2.8505 6.8925 50GPGTIKKIS58
15Bet v 1.at37 4006953 0.00 2.8505 6.8925 50GPGTIKKIS58
16Bet v 1.at42 4006955 0.00 2.8505 6.8925 50GPGTIKKIS58
17Bet v 1.0501 452734 0.00 2.8505 6.8925 50GPGTIKKIS58
18Bet v 1.at50 4006959 0.00 2.8505 6.8925 50GPGTIKKIS58
19Bet v 1.at87 4006963 0.00 2.8505 6.8925 50GPGTIKKIS58
20Pha v 1 P25985 0.00 2.8505 6.8925 49GPGTIKKIS57
21Bet v 1 P43178 0.00 2.8505 6.8925 49GPGTIKKIS57
22Bet v 1.0601 452736 0.00 2.8505 6.8925 50GPGTIKKIS58
23Vig r 1.0101 Q2VU97 0.00 2.8505 6.8925 49GPGTIKKIS57
24Bet v 1.1501 Q42499 0.00 2.8505 6.8925 50GPGTIKKIS58
25Bet v 1.0101 CAA33887 0.00 2.8505 6.8925 50GPGTIKKIS58
26Bet v 1.2101 1321726 0.00 2.8505 6.8925 50GPGTIKKIS58
27Bet v 1.0103 CAA54483.1 0.00 2.8505 6.8925 50GPGTIKKIS58
28Bet v 1.0101 P15494 0.00 2.8505 6.8925 49GPGTIKKIS57
29Bet v 1.0104 CAA54484.1 0.00 2.8505 6.8925 50GPGTIKKIS58
30Bet v 1.0106 CAA54487 0.00 2.8505 6.8925 50GPGTIKKIS58
31Bet v 1.2601 1542865 0.00 2.8505 6.8925 50GPGTIKKIS58
32Bet v 1.0108 CAB02155 0.00 2.8505 6.8925 50GPGTIKKIS58
33Bet v 1.2201 1321728 0.00 2.8505 6.8925 50GPGTIKKIS58
34Bet v 1.0109 CAB02156 0.00 2.8505 6.8925 50GPGTIKKIS58
35Bet v 1.0110 CAB02157 0.00 2.8505 6.8925 50GPGTIKKIS58
36Bet v 1.0111 CAB02158 0.00 2.8505 6.8925 50GPGTIKKIS58
37Bet v 1.0112 CAB02159 0.00 2.8505 6.8925 50GPGTIKKIS58
38Bet v 1.0113 CAB02160 0.00 2.8505 6.8925 50GPGTIKKIS58
39Bet v 1 P43183 0.00 2.8505 6.8925 49GPGTIKKIS57
40Bet v 1.2701 1542867 0.00 2.8505 6.8925 50GPGTIKKIS58
41Bet v 1.0114 CAB02161 0.00 2.8505 6.8925 50GPGTIKKIS58
42Bet v 1.0115 CAA96547 0.00 2.8505 6.8925 50GPGTIKKIS58
43Bet v 1.0601 P43179 0.00 2.8505 6.8925 49GPGTIKKIS57
44Bet v 1.0116 CAA04827 0.00 2.8505 6.8925 49GPGTIKKIS57
45Bet v 1.0117 CAA07323 0.00 2.8505 6.8925 50GPGTIKKIS58
46Bet v 1.0118 CAA07329.1 0.00 2.8505 6.8925 50GPGTIKKIS58
47Bet v 1.1501 1321712 0.00 2.8505 6.8925 50GPGTIKKIS58
48Bet v 1.2801 1542869 0.00 2.8505 6.8925 50GPGTIKKIS58
49Bet v 1.1701 1321716 0.00 2.8505 6.8925 50GPGTIKKIS58
50Bet v 1.1601 1321714 0.73 2.6368 6.6228 50GPGTIKKIT58

Histogram for best protein-peptide similarity index
Number of windows: 1697
Average PD: 9.698000
Standard deviation: 3.402233
1 0.5 49
2 1.0 94
3 1.5 0
4 2.0 3
5 2.5 20
6 3.0 2
7 3.5 0
8 4.0 6
9 4.5 7
10 5.0 1
11 5.5 1
12 6.0 1
13 6.5 6
14 7.0 14
15 7.5 19
16 8.0 36
17 8.5 63
18 9.0 79
19 9.5 82
20 10.0 163
21 10.5 161
22 11.0 225
23 11.5 195
24 12.0 164
25 12.5 138
26 13.0 69
27 13.5 36
28 14.0 28
29 14.5 16
30 15.0 5
31 15.5 8
32 16.0 1
33 16.5 3
34 17.0 0
35 17.5 0
36 18.0 1
37 18.5 0
38 19.0 0
39 19.5 0
40 20.0 0
41 20.5 0

Histogram for all protein-peptide similarity indices
Number of windows: 400056
Average PD: 18.575611
Standard deviation: 2.695052
1 0.5 49
2 1.0 94
3 1.5 0
4 2.0 3
5 2.5 20
6 3.0 2
7 3.5 0
8 4.0 6
9 4.5 7
10 5.0 1
11 5.5 21
12 6.0 24
13 6.5 6
14 7.0 16
15 7.5 68
16 8.0 65
17 8.5 91
18 9.0 205
19 9.5 122
20 10.0 291
21 10.5 395
22 11.0 685
23 11.5 1111
24 12.0 1437
25 12.5 2400
26 13.0 3280
27 13.5 4198
28 14.0 5900
29 14.5 7970
30 15.0 10227
31 15.5 12956
32 16.0 15185
33 16.5 18007
34 17.0 21955
35 17.5 24273
36 18.0 27053
37 18.5 29045
38 19.0 29324
39 19.5 29447
40 20.0 28802
41 20.5 26191
42 21.0 23768
43 21.5 20924
44 22.0 16960
45 22.5 13034
46 23.0 9355
47 23.5 6606
48 24.0 4357
49 24.5 2325
50 25.0 1121
51 25.5 466
52 26.0 171
53 26.5 31
Query sequence: GPGTIKKIS

SDAP Home Page | Search SDAP | SDAP Manual | SDAP FAQ | Contact  
UTMB | Search | Directories | UTMB Map | News | Employment | Sitemap 
This site published by Ovidiu Ivanciuc
Copyright   2001-2021  The University of Texas Medical Branch. Please review our privacy policy and Internet guidelines.