The University of Texas Medical Branch
Department of Biochemistry and Molecular Biology Sealy Center for Structural Biology Computational Biology


SDAP Home Page
SDAP Overview

Use SDAP
SDAP All
SDAP Food

SDAP Tools
FAO/WHO Allergenicity Test
FASTA Search in SDAP
Peptide Match
Peptide Similarity
Peptide-Protein PD Index
Aller_ML, Allergen Markup Language
List SDAP

About SDAP
General Information
Manual
FAQ
Publications
Who Are We
Advisory Board

Allergy Links

Our Software Tools
MPACK
FANTOM
GETAREA
NOAH/DIAMOD
MASIA
PCPMer
InterProSurf
EpiSearch

Allergen Databases
WHO/IUIS Allergen Nomenclature database
FARRP Allergen Protein Database (University of Nebraska)
Allergen Database for Food Safety (ADFS)
COMPARE database
ALLFAM (Medical University of Vienna)
Allermatch (Wageninen University)

Protein Databases
PDB
MMDB - Entrez
SWISS-PROT
NCBI - Entrez
PIR

Protein Classification
CATH
CE
FSSP
iProClass
ProtoMap
SCOP
TOPS
VAST

Bioinformatics Servers
@TOME
BLAST @ NCBI
BLAST @ PIR
FASTA @ PIR
Peptide Match @ PIR
ClustalW @ BCM
ClustalW @ EMBL - EBI
ClustalW @ PIR

Bioinformatics Tools
Cn3D
MolMol

Bioinformatics Links
Bioinformatics Links Directory

SDAP - All Allergens
Go to: SDAP All allergens       Go to: SDAP Food allergens
Send a comment to Ovidiu Ivanciuc      Submit new allergen information to SDAP
Last Updated: Nov 1, 2021  
Alphabetical listing of allergens: A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
Access to SDAP is available free of charge for Academic and non-profit use.
Licenses for commercial use can be obtained by contacting W. Braun (webraun@utmb.edu).
Secure access to SDAP is available from https://fermi.utmb.edu/SDAP

Search Results: Peptide Similarity

Query peptide: GPKDDPDAP

NoAllergenLink to NCBI/
PIR/SwissProt
PD Sequence
Similarity
Index
z(PD,min)z(PD,all)Start
Residue
Matching regionEnd
Residue
1Amb a 11.0101 CEP01_AMBAR 0.00 7.2436 7.6269 357GPKDDPDAP365
2Amb a 11.0101 CEP01_AMBAR 4.28 4.5829 5.8566 350PPKDDPNGP358
3Lat c 6.0101 XP_018521723 5.18 4.0206 5.4825 269GPKGEPGAP277
4Tri a TAI 21916 6.34 3.2983 5.0019 89GPKSRPDQS97
5Tri a 40.0101 Q41540_WHEAT 6.34 3.2983 5.0019 89GPKSRPDQS97
6Tri a TAI 21711 6.34 3.2983 5.0019 89GPKSRPDQS97
7Lat c 6.0101 XP_018521723 6.54 3.1775 4.9215 818GPKGDAGAP826
8Lol p 1.0103 6599300 6.87 2.9714 4.7844 56GPKDNGGAC64
9Lol p 1 P14946 6.87 2.9714 4.7844 56GPKDNGGAC64
10Phl p 1 P43213 6.87 2.9714 4.7844 56GPKDNGGAC64
11Ory s 1 8118421 6.87 2.9714 4.7844 56GPKDNGGAC64
12Lol p 1.0101 168316 6.87 2.9714 4.7844 56GPKDNGGAC64
13Hol l 1 P43216 6.87 2.9714 4.7844 58GPKDNGGAC66
14Poa p a 4090265 6.87 2.9714 4.7844 56GPKDNGGAC64
15Phl p 1.0101 3901094 6.87 2.9714 4.7844 56GPKDNGGAC64
16Lol p 1.0102 168314 6.87 2.9714 4.7844 45GPKDNGGAC53
17Pha a 1 Q41260 6.87 2.9714 4.7844 62GPKDNGGAC70
18Hol l 1.0102 1167836 6.87 2.9714 4.7844 41GPKDNGGAC49
19Hol l 1 3860384 6.87 2.9714 4.7844 56GPKDNGGAC64
20Pin k 2.0101 VCL_PINKO 7.25 2.7320 4.6251 288GPKDNPFLD296
21Lat c 6.0301 XP_018522130 7.39 2.6504 4.5708 190GPKGEPGAH198
22Lat c 6.0101 XP_018521723 7.60 2.5196 4.4838 425GPKGEPGAK433
23Ory s 1 8118423 7.63 2.5001 4.4708 57GPDDDGGAC65
24Sal s 6.0102 XP_014048044 7.69 2.4599 4.4441 106GAKGEPGAP114
25Lat c 6.0201 XP_018553992 7.69 2.4599 4.4441 268GPKGEAGAP276
26Lat c 6.0101 XP_018521723 7.69 2.4599 4.4441 692GPKGEPGAA700
27Tri r 2.0101 5813790 7.74 2.4299 4.4241 317STKDDGKAD325
28Act d a 450239 7.78 2.4050 4.4076 132EPTDAPEAP140
29Aed al 3.01 AAV90693 7.79 2.3996 4.4040 116GSKDEGDDS124
30Asp f 2 P79017 7.87 2.3472 4.3691 284TPTDSPSAT292
31Asp f 3 664852 7.87 2.3472 4.3691 224TPTDSPSAT232
32Uro m 1.0201 A0A4D6G2J8_9POAL 8.13 2.1886 4.2636 28GYKDVNKAP36
33Sor h 1.0101 A0A4D6G2J8_9POAL 8.13 2.1886 4.2636 42GYKDVNKAP50
34Lat c 6.0301 XP_018522130 8.18 2.1546 4.2410 928GPPGRPGAP936
35Jun a 2 9955725 8.20 2.1451 4.2346 227APRDSPNTD235
36Cry j 2 506858 8.20 2.1451 4.2346 226APRDSPNTD234
37Cry j 2 P43212 8.20 2.1451 4.2346 226APRDSPNTD234
38Cha o 2.0101 47606004 8.20 2.1451 4.2346 226APRDSPNTD234
39Ana c 2 2342496 8.22 2.1328 4.2264 24ASRDEPNDP32
40Pas n 1.0101 168419914 8.28 2.0918 4.1992 57GPDDNGGAC65
41Uro m 1.0201 A0A4D6G2J8_9POAL 8.28 2.0918 4.1992 19GPDDNGGAC27
42Ory s 1 8118425 8.28 2.0918 4.1992 70GPDDNGGAC78
43Ory s 1 8118439 8.28 2.0918 4.1992 56GPDDNGGAC64
44Tri a ps93 4099919 8.28 2.0918 4.1992 55GPDDNGGAC63
45Ory s 1 2224915 8.28 2.0918 4.1992 46GPDDNGGAC54
46Ory s 1 8118430 8.28 2.0918 4.1992 59GPDDNGGAC67
47Ory s 1 8118432 8.28 2.0918 4.1992 107GPDDNGGAC115
48Sor h 1.0101 8118432 8.28 2.0918 4.1992 33GPDDNGGAC41
49Lat c 6.0301 XP_018522130 8.33 2.0650 4.1814 847GPPGPPGAP855
50Lat c 6.0201 XP_018553992 8.33 2.0650 4.1814 1165GPPGPPGAP1173

Histogram for best protein-peptide similarity index
Number of windows: 1698
Average PD: 11.647951
Standard deviation: 1.608035
1 0.5 1
2 1.0 0
3 1.5 0
4 2.0 0
5 2.5 0
6 3.0 0
7 3.5 0
8 4.0 0
9 4.5 0
10 5.0 0
11 5.5 1
12 6.0 0
13 6.5 3
14 7.0 12
15 7.5 2
16 8.0 8
17 8.5 23
18 9.0 39
19 9.5 53
20 10.0 100
21 10.5 110
22 11.0 208
23 11.5 201
24 12.0 175
25 12.5 231
26 13.0 239
27 13.5 141
28 14.0 68
29 14.5 34
30 15.0 12
31 15.5 19
32 16.0 6
33 16.5 5
34 17.0 3
35 17.5 1
36 18.0 1
37 18.5 1
38 19.0 0
39 19.5 0

Histogram for all protein-peptide similarity indices
Number of windows: 400198
Average PD: 18.433071
Standard deviation: 2.416858
1 0.5 1
2 1.0 0
3 1.5 0
4 2.0 0
5 2.5 0
6 3.0 0
7 3.5 0
8 4.0 0
9 4.5 1
10 5.0 0
11 5.5 1
12 6.0 0
13 6.5 3
14 7.0 13
15 7.5 2
16 8.0 10
17 8.5 32
18 9.0 50
19 9.5 79
20 10.0 147
21 10.5 249
22 11.0 493
23 11.5 877
24 12.0 1039
25 12.5 1576
26 13.0 2383
27 13.5 3801
28 14.0 5282
29 14.5 7079
30 15.0 9998
31 15.5 13539
32 16.0 16234
33 16.5 20618
34 17.0 23202
35 17.5 27262
36 18.0 29948
37 18.5 32995
38 19.0 33580
39 19.5 33392
40 20.0 31180
41 20.5 26998
42 21.0 22374
43 21.5 17874
44 22.0 13188
45 22.5 9350
46 23.0 6291
47 23.5 3785
48 24.0 2695
49 24.5 1323
50 25.0 729
51 25.5 326
52 26.0 142
53 26.5 55
Query sequence: GPKDDPDAP

SDAP Home Page | Search SDAP | SDAP Manual | SDAP FAQ | Contact  
UTMB | Search | Directories | UTMB Map | News | Employment | Sitemap 
This site published by Ovidiu Ivanciuc
Copyright   2001-2021  The University of Texas Medical Branch. Please review our privacy policy and Internet guidelines.