The University of Texas Medical Branch
Department of Biochemistry and Molecular Biology Sealy Center for Structural Biology Computational Biology


SDAP Home Page
SDAP Overview

Use SDAP
SDAP All
SDAP Food

SDAP Tools
FAO/WHO Allergenicity Test
FASTA Search in SDAP
Peptide Match
Peptide Similarity
Peptide-Protein PD Index
Aller_ML, Allergen Markup Language
List SDAP

About SDAP
General Information
Manual
FAQ
Publications
Who Are We
Advisory Board

Allergy Links

Our Software Tools
MPACK
FANTOM
GETAREA
NOAH/DIAMOD
MASIA
PCPMer
InterProSurf
EpiSearch

Allergen Databases
WHO/IUIS Allergen Nomenclature database
FARRP Allergen Protein Database (University of Nebraska)
Allergen Database for Food Safety (ADFS)
COMPARE database
ALLFAM (Medical University of Vienna)
Allermatch (Wageninen University)

Protein Databases
PDB
MMDB - Entrez
SWISS-PROT
NCBI - Entrez
PIR

Protein Classification
CATH
CE
FSSP
iProClass
ProtoMap
SCOP
TOPS
VAST

Bioinformatics Servers
@TOME
BLAST @ NCBI
BLAST @ PIR
FASTA @ PIR
Peptide Match @ PIR
ClustalW @ BCM
ClustalW @ EMBL - EBI
ClustalW @ PIR

Bioinformatics Tools
Cn3D
MolMol

Bioinformatics Links
Bioinformatics Links Directory

SDAP - All Allergens
Go to: SDAP All allergens       Go to: SDAP Food allergens
Send a comment to Ovidiu Ivanciuc      Submit new allergen information to SDAP
Last Updated: Nov 1, 2021  
Alphabetical listing of allergens: A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
Access to SDAP is available free of charge for Academic and non-profit use.
Licenses for commercial use can be obtained by contacting W. Braun (webraun@utmb.edu).
Secure access to SDAP is available from https://fermi.utmb.edu/SDAP

Search Results: Peptide Similarity

Query peptide: GPKSRPDQS

NoAllergenLink to NCBI/
PIR/SwissProt
PD Sequence
Similarity
Index
z(PD,min)z(PD,all)Start
Residue
Matching regionEnd
Residue
1Tri a TAI 21711 0.00 6.7947 7.3966 89GPKSRPDQS97
2Tri a 40.0101 Q41540_WHEAT 0.00 6.7947 7.3966 89GPKSRPDQS97
3Tri a TAI 21916 0.00 6.7947 7.3966 89GPKSRPDQS97
4Hor v 1 452323 2.52 5.2872 6.3458 89GRKSRPDQS97
5Fag e 1 29839419 6.33 3.0155 4.7624 28GQRSRPHHG36
6Amb a 11.0101 CEP01_AMBAR 6.34 3.0041 4.7545 357GPKDDPDAP365
7Fag e 1 2317670 6.48 2.9216 4.6970 28GQRSRPHRG36
8Pru du 6.0101 307159112 6.60 2.8503 4.6473 173GQQGRPQQQ181
9Pru du 6 258588247 6.60 2.8503 4.6473 153GQQGRPQQQ161
10Sol i 1.0101 51093373 6.65 2.8203 4.6263 242GGKSQPACS250
11Lol p 5 Q40240 6.67 2.8100 4.6192 223SPPSRPRSS231
12Mac i 1.0201 AMP22_MACIN 6.79 2.7401 4.5704 639GPRQHQQQS647
13Mac i 1.0101 AMP23_MACIN 6.79 2.7401 4.5704 598GPRQHQQQS606
14Ara h 3 3703107 6.85 2.7027 4.5444 207SPQSQPRQE215
15Ara h 3 O82580 6.85 2.7027 4.5444 204SPQSQPRQE212
16Der f 23.0101 ALU66112 6.87 2.6871 4.5335 33SSTSRPDDD41
17Tri a TAI 21701 7.08 2.5636 4.4474 95GRRSDPNSS103
18Tri a 29.0101 253783731 7.08 2.5636 4.4474 70GRRSDPNSS78
19Aed al 3.01 AAV90693 7.25 2.4610 4.3759 116GSKDEGDDS124
20Der p 18.0101 CHL18_DERPT 7.33 2.4152 4.3439 272GPKGQFTQT280
21Hor v 1 439275 7.36 2.3960 4.3306 95GRRSHPDWS103
22Ber e 2 30313867 7.38 2.3877 4.3248 456GSRSRGRAS464
23Ole e 14.0101 W8PPL3_OLEEU 7.39 2.3808 4.3200 300DSKKKPEQS308
24Hom s 2 556642 7.42 2.3591 4.3049 26GTESDSDES34
25Eur m 14 6492307 7.47 2.3290 4.2839 867TPESRSDRC875
26Ara h 4 5712199 7.54 2.2873 4.2549 227SPHSRPRRE235
27Tri a glutenin 21930 7.56 2.2753 4.2465 195SQQQQPQQS203
28Tri a glutenin 21751 7.59 2.2616 4.2369 387GQKQQPGQG395
29Tri a glutenin 21779 7.59 2.2616 4.2369 397GQKQQPGQG405
30Lat c 6.0301 XP_018522130 7.61 2.2453 4.2255 352GPKGEPGNA360
31Gal d vitellogenin 63887 7.62 2.2440 4.2246 1098HPKNRPSKK1106
32Gal d vitellogenin 212881 7.62 2.2440 4.2246 1100HPKNRPSKK1108
33Jug r 4.0101 Q2TPW5 7.70 2.1937 4.1896 493PSRSRSSRS501
34Ber e 1 17713 7.71 2.1900 4.1870 38NPRGRSEQQ46
35Tri a gliadin 21673 7.75 2.1640 4.1689 114YPQSQPQYS122
36Bla g 11.0101 Q2L7A6_BLAGE 7.77 2.1517 4.1603 499GSKSQTTTT507
37Sol i 2 P35775 7.78 2.1491 4.1585 108GPKSNRQKA116
38Sal k 1.0201 51242679 7.90 2.0742 4.1063 121DPKNRPTIT129
39Sal k 1.0301 59895730 7.90 2.0742 4.1063 98DPKNRPTIT106
40Sal k 1.0302 59895728 7.90 2.0742 4.1063 98DPKNRPTIT106
41Sal s 6.0202 XP_014033985 7.93 2.0573 4.0945 41GPQGRNGRD49
42Tri a glutenin 886965 7.97 2.0300 4.0755 229PQQQQPQQS237
43Tri a gliadin 170732 7.97 2.0300 4.0755 223PQQQQPQQS231
44Tri a glutenin 886967 7.97 2.0300 4.0755 244PQQQQPQQS252
45Tri a gliadin 170730 7.97 2.0300 4.0755 204PQQQQPQQS212
46Phl p 5.0202 1684718 7.99 2.0186 4.0676 6GPRGGPGRS14
47Lol p 5 Q40240 7.99 2.0186 4.0676 15GPRGGPGRS23
48Phl p 5.0201 Q40963 7.99 2.0186 4.0676 9GPRGGPGRS17
49Phl p 5 13430402 7.99 2.0184 4.0674 36SPKARSERP44
50Gly m 6.0301 P11828 8.02 2.0032 4.0568 118GQSSRPQDR126

Histogram for best protein-peptide similarity index
Number of windows: 1698
Average PD: 11.372048
Standard deviation: 1.673675
1 0.5 3
2 1.0 0
3 1.5 0
4 2.0 0
5 2.5 0
6 3.0 1
7 3.5 0
8 4.0 0
9 4.5 0
10 5.0 0
11 5.5 0
12 6.0 0
13 6.5 3
14 7.0 9
15 7.5 9
16 8.0 23
17 8.5 42
18 9.0 36
19 9.5 108
20 10.0 89
21 10.5 126
22 11.0 183
23 11.5 202
24 12.0 194
25 12.5 215
26 13.0 248
27 13.5 106
28 14.0 39
29 14.5 29
30 15.0 14
31 15.5 8
32 16.0 5

Histogram for all protein-peptide similarity indices
Number of windows: 400198
Average PD: 17.760349
Standard deviation: 2.401154
1 0.5 3
2 1.0 0
3 1.5 0
4 2.0 0
5 2.5 0
6 3.0 1
7 3.5 0
8 4.0 0
9 4.5 0
10 5.0 0
11 5.5 0
12 6.0 0
13 6.5 3
14 7.0 9
15 7.5 9
16 8.0 24
17 8.5 66
18 9.0 78
19 9.5 191
20 10.0 249
21 10.5 601
22 11.0 879
23 11.5 1308
24 12.0 2067
25 12.5 2902
26 13.0 4354
27 13.5 6027
28 14.0 7771
29 14.5 10311
30 15.0 13589
31 15.5 17183
32 16.0 21242
33 16.5 25336
34 17.0 28828
35 17.5 31686
36 18.0 34393
37 18.5 34155
38 19.0 32318
39 19.5 29379
40 20.0 26164
41 20.5 21038
42 21.0 16009
43 21.5 11904
44 22.0 7986
45 22.5 4991
46 23.0 3170
47 23.5 1831
48 24.0 1090
49 24.5 646
50 25.0 286
51 25.5 84
52 26.0 32
Query sequence: GPKSRPDQS

SDAP Home Page | Search SDAP | SDAP Manual | SDAP FAQ | Contact  
UTMB | Search | Directories | UTMB Map | News | Employment | Sitemap 
This site published by Ovidiu Ivanciuc
Copyright   2001-2021  The University of Texas Medical Branch. Please review our privacy policy and Internet guidelines.