The University of Texas Medical Branch
Department of Biochemistry and Molecular Biology Sealy Center for Structural Biology Computational Biology


SDAP Home Page
SDAP Overview

Use SDAP
SDAP All
SDAP Food

SDAP Tools
FAO/WHO Allergenicity Test
FASTA Search in SDAP
Peptide Match
Peptide Similarity
Peptide-Protein PD Index
Aller_ML, Allergen Markup Language
List SDAP

About SDAP
General Information
Manual
FAQ
Publications
Who Are We
Advisory Board

Allergy Links

Our Software Tools
MPACK
FANTOM
GETAREA
NOAH/DIAMOD
MASIA
PCPMer
InterProSurf
EpiSearch

Allergen Databases
WHO/IUIS Allergen Nomenclature database
FARRP Allergen Protein Database (University of Nebraska)
Allergen Database for Food Safety (ADFS)
COMPARE database
ALLFAM (Medical University of Vienna)
Allermatch (Wageninen University)

Protein Databases
PDB
MMDB - Entrez
SWISS-PROT
NCBI - Entrez
PIR

Protein Classification
CATH
CE
FSSP
iProClass
ProtoMap
SCOP
TOPS
VAST

Bioinformatics Servers
@TOME
BLAST @ NCBI
BLAST @ PIR
FASTA @ PIR
Peptide Match @ PIR
ClustalW @ BCM
ClustalW @ EMBL - EBI
ClustalW @ PIR

Bioinformatics Tools
Cn3D
MolMol

Bioinformatics Links
Bioinformatics Links Directory

SDAP - All Allergens
Go to: SDAP All allergens       Go to: SDAP Food allergens
Send a comment to Ovidiu Ivanciuc      Submit new allergen information to SDAP
Last Updated: Nov 1, 2021  
Alphabetical listing of allergens: A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
Access to SDAP is available free of charge for Academic and non-profit use.
Licenses for commercial use can be obtained by contacting W. Braun (webraun@utmb.edu).
Secure access to SDAP is available from https://fermi.utmb.edu/SDAP

Search Results: Peptide Similarity

Query peptide: GQQGQQGQQ

NoAllergenLink to NCBI/
PIR/SwissProt
PD Sequence
Similarity
Index
z(PD,min)z(PD,all)Start
Residue
Matching regionEnd
Residue
1Sin a 2.0101 Q2TLW0 0.00 5.4463 6.7052 135GQQGQQGQQ143
2Sin a 2.0101 Q2TLW0 0.00 5.4463 6.7052 138GQQGQQGQQ146
3Sin a 2.0101 Q2TLW0 0.00 5.4463 6.7052 141GQQGQQGQQ149
4Sin a 2.0101 Q2TLW0 0.00 5.4463 6.7052 144GQQGQQGQQ152
5Sin a 2.0101 Q2TLW0 0.00 5.4463 6.7052 147GQQGQQGQQ155
6Sin a 2.0101 Q2TLW0 0.00 5.4463 6.7052 150GQQGQQGQQ158
7Sin a 2.0101 Q2TLW0 0.00 5.4463 6.7052 153GQQGQQGQQ161
8Sin a 2.0101 Q2TLW0 0.00 5.4463 6.7052 156GQQGQQGQQ164
9Sin a 2.0101 Q2TLW0 0.00 5.4463 6.7052 159GQQGQQGQQ167
10Sin a 2.0101 Q2TLW0 0.00 5.4463 6.7052 162GQQGQQGQQ170
11Sin a 2.0101 Q2TLW0 0.00 5.4463 6.7052 132GQQGQQGQQ140
12Sin a 1 1009442 2.10 4.3306 5.8564 100GQQGQQGPQ108
13Sin a 1 1009438 2.10 4.3306 5.8564 100GQQGQQGPQ108
14Bra j 1 P80207 2.38 4.1779 5.7402 84QQQGQQGQQ92
15Sin a 2.0101 Q2TLW0 2.38 4.1779 5.7402 129QQQGQQGQQ137
16Sin a 2.0101 Q2TLW0 2.38 4.1779 5.7402 165GQQGQQGQG173
17Bra n 1 P80208 2.38 4.1779 5.7402 80QQQGQQGQQ88
18Tri a glutenin 22090 2.62 4.0536 5.6457 428GQQTRQGQQ436
19Tri a glutenin 22090 2.62 4.0536 5.6457 446GQQTRQGQQ454
20Tri a glutenin 21751 2.72 4.0002 5.6051 221GQQPEQGQQ229
21Tri a glutenin 736319 2.72 4.0002 5.6051 335PEQGQQGQQ343
22Tri a glutenin 170743 2.72 4.0002 5.6051 410PEQGQQGQQ418
23Tri a glutenin 170743 2.72 4.0002 5.6051 413GQQGQQPEQ421
24Tri a glutenin 170743 2.72 4.0002 5.6051 416GQQPEQGQQ424
25Tri a glutenin 170743 2.72 4.0002 5.6051 419PEQGQQGQQ427
26Tri a glutenin 21743 2.72 4.0002 5.6051 416PEQGQQGQQ424
27Tri a glutenin 21743 2.72 4.0002 5.6051 419GQQGQQPEQ427
28Tri a glutenin 21743 2.72 4.0002 5.6051 422GQQPEQGQQ430
29Tri a glutenin 21743 2.72 4.0002 5.6051 425PEQGQQGQQ433
30Tri a glutenin 21779 2.72 4.0002 5.6051 233GQQPEQGQQ241
31Tri a glutenin 22090 2.72 4.0002 5.6051 532GQQPEQGQQ540
32Tri a glutenin 736319 2.72 4.0002 5.6051 332GQQPEQGQQ340
33Tri a glutenin 21743 2.75 3.9833 5.5922 587PTQGQQGQQ595
34Tri a glutenin 170743 2.75 3.9833 5.5922 572PTQGQQGQQ580
35Sin a 1 7545129 2.90 3.9018 5.5302 100GQQGQQGPH108
36Bra n 1 P80208 3.05 3.8239 5.4710 83GQQGQQLQQ91
37Pis v 2.0101 110349082 3.08 3.8072 5.4583 220SRRGQQGQQ228
38Pis v 2.0101 110349082 3.08 3.8056 5.4570 223GQQGQQSNN231
39Tri a 26.0101 P10388 3.31 3.6816 5.3627 570GQQGQQPAQ578
40Tri a 26.0101 P10388 3.31 3.6816 5.3627 609GQQPAQGQQ617
41Tri a 26.0101 P10388 3.31 3.6816 5.3627 585PAQGQQGQQ593
42Tri a glutenin 32968199 3.31 3.6816 5.3627 609GQQPAQGQQ617
43Tri a glutenin 32968199 3.31 3.6816 5.3627 612PAQGQQGQQ620
44Tri a glutenin 736319 3.31 3.6816 5.3627 224PAQGQQGQQ232
45Tri a 26.0101 P10388 3.31 3.6816 5.3627 606GQQGQQPAQ614
46Tri a 26.0101 P10388 3.31 3.6816 5.3627 582GQQPAQGQQ590
47Tri a 26.0101 P10388 3.31 3.6816 5.3627 612PAQGQQGQQ620
48Tri a 26.0101 P10388 3.31 3.6816 5.3627 558PAQGQQGQQ566
49Tri a glutenin 736319 3.31 3.6816 5.3627 563PAQGQQGQQ571
50Tri a glutenin 736319 3.31 3.6816 5.3627 587GQQPAQGQQ595

Histogram for best protein-peptide similarity index
Number of windows: 1698
Average PD: 10.228583
Standard deviation: 1.878068
1 0.5 1
2 1.0 0
3 1.5 0
4 2.0 0
5 2.5 4
6 3.0 7
7 3.5 3
8 4.0 4
9 4.5 5
10 5.0 7
11 5.5 4
12 6.0 21
13 6.5 21
14 7.0 20
15 7.5 58
16 8.0 29
17 8.5 65
18 9.0 78
19 9.5 119
20 10.0 160
21 10.5 222
22 11.0 244
23 11.5 282
24 12.0 148
25 12.5 96
26 13.0 40
27 13.5 21
28 14.0 13
29 14.5 10
30 15.0 8
31 15.5 6

Histogram for all protein-peptide similarity indices
Number of windows: 400198
Average PD: 16.553840
Standard deviation: 2.468824
1 0.5 11
2 1.0 0
3 1.5 0
4 2.0 0
5 2.5 6
6 3.0 18
7 3.5 27
8 4.0 168
9 4.5 23
10 5.0 40
11 5.5 77
12 6.0 78
13 6.5 155
14 7.0 211
15 7.5 488
16 8.0 457
17 8.5 522
18 9.0 656
19 9.5 1050
20 10.0 1282
21 10.5 1703
22 11.0 2129
23 11.5 3265
24 12.0 4230
25 12.5 6392
26 13.0 7561
27 13.5 10732
28 14.0 13998
29 14.5 18129
30 15.0 22400
31 15.5 25885
32 16.0 29684
33 16.5 32697
34 17.0 34494
35 17.5 34288
36 18.0 33225
37 18.5 30413
38 19.0 23850
39 19.5 19455
40 20.0 14244
41 20.5 10520
42 21.0 6947
43 21.5 4214
44 22.0 2420
45 22.5 1224
46 23.0 530
47 23.5 235
48 24.0 56
Query sequence: GQQGQQGQQ

SDAP Home Page | Search SDAP | SDAP Manual | SDAP FAQ | Contact  
UTMB | Search | Directories | UTMB Map | News | Employment | Sitemap 
This site published by Ovidiu Ivanciuc
Copyright   2001-2021  The University of Texas Medical Branch. Please review our privacy policy and Internet guidelines.