The University of Texas Medical Branch
Department of Biochemistry and Molecular Biology Sealy Center for Structural Biology Computational Biology


SDAP Home Page
SDAP Overview

Use SDAP
SDAP All
SDAP Food

SDAP Tools
FAO/WHO Allergenicity Test
FASTA Search in SDAP
Peptide Match
Peptide Similarity
Peptide-Protein PD Index
Aller_ML, Allergen Markup Language
List SDAP

About SDAP
General Information
Manual
FAQ
Publications
Who Are We
Advisory Board

Allergy Links

Our Software Tools
MPACK
FANTOM
GETAREA
NOAH/DIAMOD
MASIA
PCPMer
InterProSurf
EpiSearch

Allergen Databases
WHO/IUIS Allergen Nomenclature database
FARRP Allergen Protein Database (University of Nebraska)
Allergen Database for Food Safety (ADFS)
COMPARE database
ALLFAM (Medical University of Vienna)
Allermatch (Wageninen University)

Protein Databases
PDB
MMDB - Entrez
SWISS-PROT
NCBI - Entrez
PIR

Protein Classification
CATH
CE
FSSP
iProClass
ProtoMap
SCOP
TOPS
VAST

Bioinformatics Servers
@TOME
BLAST @ NCBI
BLAST @ PIR
FASTA @ PIR
Peptide Match @ PIR
ClustalW @ BCM
ClustalW @ EMBL - EBI
ClustalW @ PIR

Bioinformatics Tools
Cn3D
MolMol

Bioinformatics Links
Bioinformatics Links Directory

SDAP - All Allergens
Go to: SDAP All allergens       Go to: SDAP Food allergens
Send a comment to Ovidiu Ivanciuc      Submit new allergen information to SDAP
Last Updated: Nov 1, 2021  
Alphabetical listing of allergens: A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
Access to SDAP is available free of charge for Academic and non-profit use.
Licenses for commercial use can be obtained by contacting W. Braun (webraun@utmb.edu).
Secure access to SDAP is available from https://fermi.utmb.edu/SDAP

Search Results: Peptide Similarity

Query peptide: GYPKGRKDS

NoAllergenLink to NCBI/
PIR/SwissProt
PD Sequence
Similarity
Index
z(PD,min)z(PD,all)Start
Residue
Matching regionEnd
Residue
1Bom p 4.0101 Q7M4I3 0.00 7.4492 7.5596 180GYPKGRKDS188
2Act c 2 190358875 7.52 2.6916 4.5053 201SYPKDDQTS209
3Dol m 1.02 P53357 7.52 2.6897 4.5041 101GYPKAVENT109
4Vesp v 1.0101 PA1_VESVE 7.52 2.6897 4.5041 101GYPKAVENT109
5Can f 5.0101 P09582 7.59 2.6476 4.4771 199GVLEGKKDT207
6Per a 1.0201 2231297 7.72 2.5644 4.4236 136GLPRQRRRS144
7Aed a 4.0101 MALT_AEDAE 7.76 2.5406 4.4084 30VYPRSFKDS38
8Fag e 1 29839419 7.84 2.4867 4.3738 131EYPRSQRDQ139
9Fag e 1 2317670 8.00 2.3881 4.3105 131EYPQSQRDQ139
10Dic v a 763532 8.01 2.3801 4.3053 147GLSRKRRDS155
11Ses i 7.0101 Q9AUD2 8.02 2.3757 4.3025 203GNPQGGRQS211
12Sor h 13.0201 A0A077B569_SORHL 8.07 2.3449 4.2827 50ASGDGKKDS58
13Sin a 1 1009442 8.21 2.2533 4.2239 6GIPKCRKEF14
14Sin a 1 1009438 8.21 2.2533 4.2239 6GIPKCRKEF14
15Sin a 1 1009434 8.21 2.2533 4.2239 6GIPKCRKEF14
16Mus a 4.0101 88191901 8.25 2.2316 4.2100 176SYPKDDQTT184
17Ves v 1 P49369 8.29 2.2047 4.1927 284GIPKSKSSQ292
18Pis v 2.0101 110349082 8.31 2.1877 4.1818 209GQSRSRSQS217
19Sol g 4.0201 7638030 8.33 2.1806 4.1772 38TVPKGENDP46
20Sol g 4.0101 Q9NH75 8.33 2.1806 4.1772 38TVPKGENDP46
21Gly m glycinin G1 169973 8.34 2.1689 4.1697 303SQSKSRRNG311
22Gly m 6.0101 P04776 8.34 2.1689 4.1697 303SQSKSRRNG311
23Hol l 1 3860384 8.35 2.1668 4.1684 163EYPKGTKVT171
24Tri a gliadin 170732 8.44 2.1072 4.1301 234GVSQSQQQS242
25Tri a glutenin 886963 8.44 2.1072 4.1301 207GVSQSQQQS215
26Tri a glutenin 21930 8.44 2.1072 4.1301 206GVSQSQQQS214
27Tri a glutenin 21926 8.44 2.1072 4.1301 208GVSQSQQQS216
28Tri a gliadin 170730 8.44 2.1072 4.1301 215GVSQSQQQS223
29Pis v 5.0101 171853009 8.44 2.1053 4.1289 200QQSRGRRQS208
30Pru du 6.0101 307159112 8.46 2.0931 4.1211 154GRQQGRQQQ162
31Pru du 6 258588247 8.46 2.0931 4.1211 134GRQQGRQQQ142
32Sin a 2.0101 Q2TLW0 8.52 2.0551 4.0966 312GPPQSPQDN320
33Pyr c 1 O65200 8.54 2.0439 4.0895 66GYVKHRVDS74
34Vesp c 1.0101 O65200 8.55 2.0379 4.0857 249GVPKSKNPQ257
35Ory s 1 8118428 8.57 2.0247 4.0772 28NYTAGRRST36
36Ory s TAI 1304216 8.58 2.0176 4.0726 102GYPRTPRTG110
37Ory s TAI 218193 8.58 2.0176 4.0726 156GYPRTPRTG164
38Ory s TAI 218195 8.58 2.0176 4.0726 153GYPRTPRTG161
39Ory s TAI 1304218 8.58 2.0176 4.0726 104GYPRTPRTG112
40Ory s TAI 1304217 8.58 2.0176 4.0726 100GYPRTPRTG108
41Ory s TAI 218201 8.58 2.0176 4.0726 157GYPRTPRTG165
42Ory s TAI 1398913 8.58 2.0176 4.0726 157GYPRTPRTG165
43Aed a 3 O01949 8.62 1.9967 4.0592 107GSDDGEEDS115
44Pen ch 31.0101 61380693 8.63 1.9853 4.0519 526GAPKEKKEQ534
45Lol p 1.0103 6599300 8.64 1.9841 4.0511 163KYPDGTKPT171
46Hol l 1 P43216 8.64 1.9841 4.0511 165KYPDGTKPT173
47Hol l 1.0102 1167836 8.64 1.9841 4.0511 148KYPDGTKPT156
48Pha a 1 Q41260 8.64 1.9841 4.0511 169KYPDGTKPT177
49Ses i 1 13183175 8.64 1.9817 4.0495 119GYQEGQSQQ127
50Amb a 1 P28744 8.66 1.9707 4.0425 185GPPVPRKGS193

Histogram for best protein-peptide similarity index
Number of windows: 1698
Average PD: 11.771561
Standard deviation: 1.580255
1 0.5 1
2 1.0 0
3 1.5 0
4 2.0 0
5 2.5 0
6 3.0 0
7 3.5 0
8 4.0 0
9 4.5 0
10 5.0 0
11 5.5 0
12 6.0 0
13 6.5 0
14 7.0 0
15 7.5 0
16 8.0 8
17 8.5 22
18 9.0 47
19 9.5 38
20 10.0 100
21 10.5 116
22 11.0 186
23 11.5 184
24 12.0 223
25 12.5 201
26 13.0 268
27 13.5 127
28 14.0 75
29 14.5 41
30 15.0 23
31 15.5 14
32 16.0 10
33 16.5 7
34 17.0 2
35 17.5 2
36 18.0 1
37 18.5 0
38 19.0 1
39 19.5 0
40 20.0 0
41 20.5 0
42 21.0 0

Histogram for all protein-peptide similarity indices
Number of windows: 400198
Average PD: 18.608029
Standard deviation: 2.461523
1 0.5 1
2 1.0 0
3 1.5 0
4 2.0 0
5 2.5 0
6 3.0 0
7 3.5 0
8 4.0 0
9 4.5 0
10 5.0 0
11 5.5 0
12 6.0 0
13 6.5 0
14 7.0 0
15 7.5 0
16 8.0 8
17 8.5 22
18 9.0 48
19 9.5 48
20 10.0 136
21 10.5 232
22 11.0 360
23 11.5 592
24 12.0 1033
25 12.5 1581
26 13.0 2614
27 13.5 3321
28 14.0 4709
29 14.5 6860
30 15.0 9126
31 15.5 12521
32 16.0 15071
33 16.5 19017
34 17.0 22794
35 17.5 25905
36 18.0 29211
37 18.5 31832
38 19.0 32150
39 19.5 32641
40 20.0 30566
41 20.5 27614
42 21.0 24406
43 21.5 19556
44 22.0 15161
45 22.5 11222
46 23.0 7453
47 23.5 5277
48 24.0 3232
49 24.5 2014
50 25.0 1199
51 25.5 444
52 26.0 162
53 26.5 57
Query sequence: GYPKGRKDS

SDAP Home Page | Search SDAP | SDAP Manual | SDAP FAQ | Contact  
UTMB | Search | Directories | UTMB Map | News | Employment | Sitemap 
This site published by Ovidiu Ivanciuc
Copyright   2001-2021  The University of Texas Medical Branch. Please review our privacy policy and Internet guidelines.