The University of Texas Medical Branch
Department of Biochemistry and Molecular Biology Sealy Center for Structural Biology Computational Biology


SDAP Home Page
SDAP Overview

Use SDAP
SDAP All
SDAP Food

SDAP Tools
FAO/WHO Allergenicity Test
FASTA Search in SDAP
Peptide Match
Peptide Similarity
Peptide-Protein PD Index
Aller_ML, Allergen Markup Language
List SDAP

About SDAP
General Information
Manual
FAQ
Publications
Who Are We
Advisory Board

Allergy Links

Our Software Tools
MPACK
FANTOM
GETAREA
NOAH/DIAMOD
MASIA
PCPMer
InterProSurf
EpiSearch

Allergen Databases
WHO/IUIS Allergen Nomenclature database
FARRP Allergen Protein Database (University of Nebraska)
Allergen Database for Food Safety (ADFS)
COMPARE database
ALLFAM (Medical University of Vienna)
Allermatch (Wageninen University)

Protein Databases
PDB
MMDB - Entrez
SWISS-PROT
NCBI - Entrez
PIR

Protein Classification
CATH
CE
FSSP
iProClass
ProtoMap
SCOP
TOPS
VAST

Bioinformatics Servers
@TOME
BLAST @ NCBI
BLAST @ PIR
FASTA @ PIR
Peptide Match @ PIR
ClustalW @ BCM
ClustalW @ EMBL - EBI
ClustalW @ PIR

Bioinformatics Tools
Cn3D
MolMol

Bioinformatics Links
Bioinformatics Links Directory

SDAP - All Allergens
Go to: SDAP All allergens       Go to: SDAP Food allergens
Send a comment to Ovidiu Ivanciuc      Submit new allergen information to SDAP
Last Updated: Nov 1, 2021  
Alphabetical listing of allergens: A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
Access to SDAP is available free of charge for Academic and non-profit use.
Licenses for commercial use can be obtained by contacting W. Braun (webraun@utmb.edu).
Secure access to SDAP is available from https://fermi.utmb.edu/SDAP

Search Results: Peptide Similarity

Query peptide: LSNKGASGD

NoAllergenLink to NCBI/
PIR/SwissProt
PD Sequence
Similarity
Index
z(PD,min)z(PD,all)Start
Residue
Matching regionEnd
Residue
1Asp o 21 217823 0.00 7.0998 7.0154 430LSNKGASGD438
2Asp o 21 166531 0.00 7.0998 7.0154 430LSNKGASGD438
3Sor h 13.0201 A0A077B569_SORHL 5.18 3.5926 4.9426 45ISKLGASGD53
4Jun o 4 O64943 5.19 3.5861 4.9388 86LNNKGASVK94
5Lat c 6.0201 XP_018553992 5.53 3.3600 4.8052 501VGPKGATGE509
6Hom s 1 2342526 5.77 3.1956 4.7080 64ASSKTSSGD72
7Hom s 1.0101 2723284 5.77 3.1956 4.7080 106ASSKTSSGD114
8Pla a 2 51316214 6.00 3.0399 4.6160 346LSYRGAGGP354
9Lat c 6.0201 XP_018553992 6.03 3.0200 4.6042 687AGNDGAKGD695
10Sal s 6.0101 XP_014059932 6.20 2.9050 4.5362 370AGNNGADGN378
11Sal s 6.0102 XP_014048044 6.20 2.9050 4.5362 370AGNNGADGN378
12Der p 11 37778944 6.59 2.6396 4.3794 12SSGAGASGD20
13Sal s 6.0101 XP_014059932 6.77 2.5221 4.3100 814AGDNGAKGD822
14Sal s 6.0102 XP_014048044 6.77 2.5221 4.3100 814AGDNGAKGD822
15Mus a 5.0101 6073860 6.81 2.4903 4.2912 91ASNPSAAGD99
16Sal s 6.0201 XP_013998297 6.82 2.4854 4.2882 891LGPAGASGP899
17Sal s 6.0202 XP_014033985 6.82 2.4854 4.2882 891LGPAGASGP899
18Lat c 6.0201 XP_018553992 6.90 2.4299 4.2555 486AGPKGAPGE494
19Asp f 34.0101 133920236 6.91 2.4270 4.2537 56LNSQNASCD64
20Pru av 2 P50694 6.96 2.3908 4.2323 141VTPQGGTGD149
21Bos d 6 2190337 6.98 2.3771 4.2242 127LSHKDDSPD135
22Bos d 6 P02769 6.98 2.3771 4.2242 127LSHKDDSPD135
23Gal d 6.0101 VIT1_CHICK 6.98 2.3752 4.2232 945FDSDSASGE953
24gal d 6.0101 P87498 6.98 2.3752 4.2232 945FDSDSASGE953
25Pru du 10.0101 MDL2_PRUDU 7.02 2.3535 4.2103 227LLNKGNSNN235
26Cuc ma 4.0101 11SB_CUCMA 7.02 2.3520 4.2094 217SSRKGSSGE225
27Sal s 6.0202 XP_014033985 7.03 2.3437 4.2045 564AGNQGMPGD572
28Sal s 6.0201 XP_013998297 7.03 2.3437 4.2045 564AGNQGMPGD572
29Sor h 13.0101 A0A077B155_SORHL 7.08 2.3084 4.1836 57ISKLGAKGD65
30Amb a 1 P28744 7.10 2.2984 4.1778 188VPRKGSDGD196
31Lat c 6.0101 XP_018521723 7.11 2.2898 4.1727 487AGGKGAPGE495
32Asp fl protease 5702208 7.16 2.2589 4.1544 65LERRGATGG73
33Asp o 13 2428 7.16 2.2589 4.1544 65LERRGATGG73
34Tri a ps93 4099919 7.18 2.2416 4.1442 73ISSMGACGN81
35Sal s 6.0102 XP_014048044 7.18 2.2394 4.1429 688AGNDGAKGE696
36Sal s 6.0101 XP_014059932 7.18 2.2394 4.1429 688AGNDGAKGE696
37Pru av 2 P50694 7.20 2.2275 4.1358 167LQKKGSDGS175
38Der p 1.0124 256095986 7.21 2.2254 4.1346 146ASQHGCNGD154
39Cari p 2.0101 PAPA2_CARPA 7.22 2.2153 4.1286 150VKNQGACGS158
40Lat c 6.0101 XP_018521723 7.26 2.1867 4.1117 568PGPKGAAGD576
41Clu h 1.0301 242253967 7.29 2.1676 4.1004 34VGLKGKSGD42
42Lat c 6.0101 XP_018521723 7.30 2.1645 4.0986 502MGAQGATGE510
43Pen c 13.0101 4587983 7.42 2.0803 4.0488 237AKSRGANGK245
44Pen ch 13 6684758 7.42 2.0803 4.0488 237AKSRGANGK245
45Pyr c 5 3243234 7.43 2.0720 4.0439 163LNQPGASSA171
46Jug r 6.0101 VCL6_JUGRE 7.44 2.0654 4.0400 375LSSSGSRGQ383
47Sal s 6.0201 XP_013998297 7.49 2.0337 4.0213 837TGDKGPSGE845
48Hom s 1.0101 2723284 7.50 2.0249 4.0161 426LGDQTQDGD434
49Hom s 1 2342526 7.50 2.0249 4.0161 384LGDQTQDGD392
50Lat c 6.0301 XP_018522130 7.54 1.9956 3.9988 225AGARGADGN233

Histogram for best protein-peptide similarity index
Number of windows: 1698
Average PD: 10.494749
Standard deviation: 1.478179
1 0.5 2
2 1.0 0
3 1.5 0
4 2.0 0
5 2.5 0
6 3.0 0
7 3.5 0
8 4.0 0
9 4.5 0
10 5.0 0
11 5.5 2
12 6.0 3
13 6.5 3
14 7.0 10
15 7.5 15
16 8.0 21
17 8.5 85
18 9.0 84
19 9.5 181
20 10.0 169
21 10.5 260
22 11.0 210
23 11.5 321
24 12.0 126
25 12.5 99
26 13.0 49
27 13.5 24
28 14.0 11
29 14.5 8
30 15.0 8
31 15.5 3
32 16.0 2
33 16.5 0
34 17.0 0
35 17.5 1
36 18.0 0
37 18.5 0
38 19.0 0
39 19.5 0
40 20.0 0
41 20.5 0

Histogram for all protein-peptide similarity indices
Number of windows: 400198
Average PD: 17.546221
Standard deviation: 2.501096
1 0.5 2
2 1.0 0
3 1.5 0
4 2.0 0
5 2.5 0
6 3.0 0
7 3.5 0
8 4.0 0
9 4.5 0
10 5.0 0
11 5.5 2
12 6.0 3
13 6.5 4
14 7.0 13
15 7.5 23
16 8.0 29
17 8.5 138
18 9.0 175
19 9.5 360
20 10.0 435
21 10.5 839
22 11.0 1264
23 11.5 2127
24 12.0 2680
25 12.5 3871
26 13.0 5271
27 13.5 7542
28 14.0 9567
29 14.5 12760
30 15.0 15341
31 15.5 18355
32 16.0 22397
33 16.5 25801
34 17.0 28347
35 17.5 30721
36 18.0 31845
37 18.5 32821
38 19.0 30103
39 19.5 27644
40 20.0 24578
41 20.5 19963
42 21.0 15599
43 21.5 11249
44 22.0 7465
45 22.5 5103
46 23.0 2897
47 23.5 1533
48 24.0 798
49 24.5 324
50 25.0 144
51 25.5 55
52 26.0 5
53 26.5 4
Query sequence: LSNKGASGD

SDAP Home Page | Search SDAP | SDAP Manual | SDAP FAQ | Contact  
UTMB | Search | Directories | UTMB Map | News | Employment | Sitemap 
This site published by Ovidiu Ivanciuc
Copyright   2001-2021  The University of Texas Medical Branch. Please review our privacy policy and Internet guidelines.