The University of Texas Medical Branch
Department of Biochemistry and Molecular Biology Sealy Center for Structural Biology Computational Biology


SDAP Home Page
SDAP Overview

Use SDAP
SDAP All
SDAP Food

SDAP Tools
FAO/WHO Allergenicity Test
FASTA Search in SDAP
Peptide Match
Peptide Similarity
Peptide-Protein PD Index
Aller_ML, Allergen Markup Language
List SDAP

About SDAP
General Information
Manual
FAQ
Publications
Who Are We
Advisory Board

Allergy Links

Our Software Tools
MPACK
FANTOM
GETAREA
NOAH/DIAMOD
MASIA
PCPMer
InterProSurf
EpiSearch

Allergen Databases
WHO/IUIS Allergen Nomenclature database
FARRP Allergen Protein Database (University of Nebraska)
Allergen Database for Food Safety (ADFS)
COMPARE database
ALLFAM (Medical University of Vienna)
Allermatch (Wageninen University)

Protein Databases
PDB
MMDB - Entrez
SWISS-PROT
NCBI - Entrez
PIR

Protein Classification
CATH
CE
FSSP
iProClass
ProtoMap
SCOP
TOPS
VAST

Bioinformatics Servers
@TOME
BLAST @ NCBI
BLAST @ PIR
FASTA @ PIR
Peptide Match @ PIR
ClustalW @ BCM
ClustalW @ EMBL - EBI
ClustalW @ PIR

Bioinformatics Tools
Cn3D
MolMol

Bioinformatics Links
Bioinformatics Links Directory

SDAP - All Allergens
Go to: SDAP All allergens       Go to: SDAP Food allergens
Send a comment to Ovidiu Ivanciuc      Submit new allergen information to SDAP
Last Updated: Nov 1, 2021  
Alphabetical listing of allergens: A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
Access to SDAP is available free of charge for Academic and non-profit use.
Licenses for commercial use can be obtained by contacting W. Braun (webraun@utmb.edu).
Secure access to SDAP is available from https://fermi.utmb.edu/SDAP

Search Results: Peptide Similarity

Query peptide: LSSSRKDCD

NoAllergenLink to NCBI/
PIR/SwissProt
PD Sequence
Similarity
Index
z(PD,min)z(PD,all)Start
Residue
Matching regionEnd
Residue
1Ole e 1.0104 473105 0.00 6.8074 7.1956 83LSSSRKDCD91
2Lig v 1.0102 3256212 0.00 6.8074 7.1956 83LSSSRKDCD91
3Fra e 1.0101 33327133 0.00 6.8074 7.1956 83LSSSRKDCD91
4Ole e 1.0103 473107 0.86 6.2662 6.8414 83ISSSRKDCD91
5Lig v 1 O82015 0.86 6.2662 6.8414 83ISSSRKDCD91
6Fra e 1.0102 56122438 1.47 5.8768 6.5866 83LSSSRKDCH91
7Fra e 1.0201 34978692 1.81 5.6621 6.4461 84LSSGRKDCN92
8Ole e 1.0107 2465131 2.01 5.5363 6.3637 84ISSGRKDCD92
9Ole e 1.0106 2465129 2.67 5.1209 6.0918 84ISSGRKDCN92
10Ole e 1.0102 473106 2.67 5.1209 6.0918 83ISSGRKDCN91
11Ole e 1 P19963 2.67 5.1209 6.0918 83ISSGRKDCN91
12Ole e 1.0105 2465127 2.67 5.1209 6.0918 84ISSGRKDCN92
13Ole e 1.0101 13195753 4.62 3.8846 5.2827 68ISSGSKDCN76
14Can s 4.0101 XP_030482568.1 6.06 2.9745 4.6872 24SSSSQRQCN32
15Pla l 1 28380114 6.63 2.6142 4.4513 79VKSSRPDCS87
16Der f 16.0101 21591547 6.64 2.6041 4.4447 244LSLDKKDID252
17Blo t 2.0103 34495268 6.67 2.5877 4.4340 11VSSRRQRCQ19
18Per a 1.0201 2231297 6.81 2.4994 4.3762 296LSSGQRNLQ304
19Der p 14.0101 20385544 6.96 2.4044 4.3141 674LSQIRKNAD682
20Cha o 2.0101 47606004 7.01 2.3737 4.2939 466LSSSPPNCK474
21Gal d 3 P02789 7.04 2.3530 4.2804 248LDGSRQPVD256
22Gal d 3 757851 7.04 2.3530 4.2804 248LDGSRQPVD256
23Lyc e LAT52 295812 7.10 2.3128 4.2540 99VKSPREDCK107
24Hom s 5 1346344 7.11 2.3092 4.2517 555SSSSRKSYK563
25Pis v 3.0101 133711973 7.15 2.2816 4.2337 402LSSSKNSGQ410
26Aed al 2 ALL2_AEDAE 7.35 2.1574 4.1523 117LPSTNNDCA125
27Aed a 2 159559 7.35 2.1574 4.1523 117LPSTNNDCA125
28Aed a 2 P18153 7.35 2.1574 4.1523 117LPSTNNDCA125
29Dic v a 763532 7.36 2.1512 4.1483 148LSRKRRDSN156
30Tar o RAP 2707295 7.36 2.1483 4.1464 63FTSSKHKVD71
31Asp f 34.0101 133920236 7.42 2.1157 4.1251 56LNSQNASCD64
32Mala s 12.0101 78038796 7.42 2.1112 4.1222 110HTSSQKHMN118
33Ana o 1.0102 21666498 7.48 2.0766 4.0995 424LSSSKSSHP432
34Ana o 1.0101 21914823 7.48 2.0766 4.0995 426LSSSKSSHP434
35Gal d vitellogenin 212881 7.52 2.0521 4.0835 1355YSSTRSSHD1363
36Gal d vitellogenin 63887 7.52 2.0521 4.0835 1353YSSTRSSHD1361
37Vig r 2.0101 Q198W3 7.52 2.0482 4.0809 242KSSSRKELS250
38Ana o 2 25991543 7.55 2.0321 4.0704 162VSNSQNQLD170
39Pis v 5.0101 171853009 7.55 2.0321 4.0704 170VSNSQNQLD178
40Rhi o 1.0101 I1CLC6_RHIO9 7.56 2.0240 4.0651 228LNDANKDQD236
41Ves v 6.0101 G8IIT0 7.64 1.9753 4.0332 1307VRNSVKDCQ1315
42Hom s 4 3297882 7.67 1.9520 4.0180 53LSTPQRNFE61
43Phl p 13 4826572 7.68 1.9483 4.0155 346LCSDKQPCN354
44For t 2.0101 188572343 7.73 1.9179 3.9956 205VSSSRDTTA213
45Gly m conglycinin 169929 7.73 1.9175 3.9953 427KSSSRKTIS435
46Gly m conglycinin 169927 7.73 1.9175 3.9953 5KSSSRKTIS13
47Gly m 5.0201 Q9FZP9 7.73 1.9175 3.9953 346KSSSRKTIS354
48Gly m conglycinin 256427 7.73 1.9175 3.9953 226KSSSRKTIS234
49Gly m conglycinin 18536 7.73 1.9175 3.9953 392KSSSRKTIS400
50Gly m 5.0101 O22120 7.73 1.9175 3.9953 330KSSSRKTIS338

Histogram for best protein-peptide similarity index
Number of windows: 1698
Average PD: 10.759348
Standard deviation: 1.580530
1 0.5 3
2 1.0 2
3 1.5 1
4 2.0 1
5 2.5 1
6 3.0 4
7 3.5 0
8 4.0 0
9 4.5 0
10 5.0 1
11 5.5 0
12 6.0 0
13 6.5 1
14 7.0 5
15 7.5 15
16 8.0 29
17 8.5 39
18 9.0 56
19 9.5 117
20 10.0 171
21 10.5 235
22 11.0 221
23 11.5 249
24 12.0 231
25 12.5 182
26 13.0 65
27 13.5 32
28 14.0 13
29 14.5 9
30 15.0 3
31 15.5 5
32 16.0 5
33 16.5 0

Histogram for all protein-peptide similarity indices
Number of windows: 400198
Average PD: 17.377536
Standard deviation: 2.415010
1 0.5 3
2 1.0 2
3 1.5 1
4 2.0 1
5 2.5 1
6 3.0 4
7 3.5 0
8 4.0 0
9 4.5 0
10 5.0 1
11 5.5 0
12 6.0 0
13 6.5 1
14 7.0 5
15 7.5 15
16 8.0 29
17 8.5 46
18 9.0 74
19 9.5 204
20 10.0 324
21 10.5 626
22 11.0 1026
23 11.5 1613
24 12.0 2580
25 12.5 3814
26 13.0 5761
27 13.5 7576
28 14.0 11199
29 14.5 13697
30 15.0 17278
31 15.5 20629
32 16.0 24415
33 16.5 28495
34 17.0 31752
35 17.5 31985
36 18.0 32454
37 18.5 31610
38 19.0 29034
39 19.5 26451
40 20.0 22053
41 20.5 17680
42 21.0 13286
43 21.5 9753
44 22.0 6151
45 22.5 3887
46 23.0 2181
47 23.5 1374
48 24.0 642
49 24.5 347
50 25.0 110
51 25.5 24
Query sequence: LSSSRKDCD

SDAP Home Page | Search SDAP | SDAP Manual | SDAP FAQ | Contact  
UTMB | Search | Directories | UTMB Map | News | Employment | Sitemap 
This site published by Ovidiu Ivanciuc
Copyright   2001-2021  The University of Texas Medical Branch. Please review our privacy policy and Internet guidelines.