The University of Texas Medical Branch
Department of Biochemistry and Molecular Biology Sealy Center for Structural Biology Computational Biology


SDAP Home Page
SDAP Overview

Use SDAP
SDAP All
SDAP Food

SDAP Tools
FAO/WHO Allergenicity Test
FASTA Search in SDAP
Peptide Match
Peptide Similarity
Peptide-Protein PD Index
Aller_ML, Allergen Markup Language
List SDAP

About SDAP
General Information
Manual
FAQ
Publications
Who Are We
Advisory Board

Allergy Links

Our Software Tools
MPACK
FANTOM
GETAREA
NOAH/DIAMOD
MASIA
PCPMer
InterProSurf
EpiSearch

Allergen Databases
WHO/IUIS Allergen Nomenclature database
FARRP Allergen Protein Database (University of Nebraska)
Allergen Database for Food Safety (ADFS)
COMPARE database
ALLFAM (Medical University of Vienna)
Allermatch (Wageninen University)

Protein Databases
PDB
MMDB - Entrez
SWISS-PROT
NCBI - Entrez
PIR

Protein Classification
CATH
CE
FSSP
iProClass
ProtoMap
SCOP
TOPS
VAST

Bioinformatics Servers
@TOME
BLAST @ NCBI
BLAST @ PIR
FASTA @ PIR
Peptide Match @ PIR
ClustalW @ BCM
ClustalW @ EMBL - EBI
ClustalW @ PIR

Bioinformatics Tools
Cn3D
MolMol

Bioinformatics Links
Bioinformatics Links Directory

SDAP - All Allergens
Go to: SDAP All allergens       Go to: SDAP Food allergens
Send a comment to Ovidiu Ivanciuc      Submit new allergen information to SDAP
Last Updated: Nov 1, 2021  
Alphabetical listing of allergens: A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
Access to SDAP is available free of charge for Academic and non-profit use.
Licenses for commercial use can be obtained by contacting W. Braun (webraun@utmb.edu).
Secure access to SDAP is available from https://fermi.utmb.edu/SDAP

Search Results: Peptide Similarity

Query peptide: PAPQPAPKS

NoAllergenLink to NCBI/
PIR/SwissProt
PD Sequence
Similarity
Index
z(PD,min)z(PD,all)Start
Residue
Matching regionEnd
Residue
1Aed a 7.0101 Q16TN9_AEDAE 0.00 6.6811 7.9764 34PAPQPAPKS42
2Bos d 13.0201 MYL3_BOVIN 4.90 3.8000 5.7808 27PAPPPAPEP35
3Tri a gliadin 170740 5.38 3.5188 5.5666 24PVPQPQPQN32
4Tri a gliadin 21757 5.38 3.5188 5.5666 24PVPQPQPQN32
5Gal d 7.0101 MLE1_CHICK 5.54 3.4242 5.4945 18PAPAPAPAP26
6Gal d 7.0101 MLE1_CHICK 5.54 3.4242 5.4945 20PAPAPAPAP28
7Bos d 13.0101 MYL1_BOVIN 5.54 3.4242 5.4945 16PAPAPAPAP24
8Bos d 13.0101 MYL1_BOVIN 5.54 3.4242 5.4945 18PAPAPAPAP26
9Bos d 13.0101 MYL1_BOVIN 5.54 3.4242 5.4945 20PAPAPAPAP28
10Bos d 13.0101 MYL1_BOVIN 5.54 3.4242 5.4945 22PAPAPAPAP30
11Gal d 7.0101 MLE1_CHICK 5.54 3.4242 5.4945 16PAPAPAPAP24
12Bos d 13.0201 MYL3_BOVIN 5.68 3.3410 5.4311 23PAPAPAPPP31
13Api m 4.0101 P01501 5.72 3.3178 5.4134 23PEPEPAPEP31
14Gal d 7.0101 MLE1_CHICK 5.92 3.2024 5.3255 22PAPAPAPAK30
15Sal k 1.0302 59895728 6.00 3.1548 5.2892 139SAPRPAGKR147
16Bos d 13.0101 MYL1_BOVIN 6.06 3.1192 5.2621 24PAPAPAPPK32
17Tri a gliadin 170710 6.18 3.0522 5.2110 89PLPYPQPQS97
18Hom s 1 2342526 6.60 2.8033 5.0213 414PVPQPLPSD422
19Hom s 1.0101 2723284 6.60 2.8033 5.0213 456PVPQPLPSD464
20Par j 2 P55958 6.68 2.7563 4.9855 24PAPAPAPGE32
21Lat c 6.0101 XP_018521723 6.87 2.6439 4.8998 840PAGPPGPKG848
22Sal s 6.0101 XP_014059932 6.91 2.6182 4.8802 930PAGTPGPQG938
23Der f 15.0101 5815436 6.93 2.6074 4.8720 471TTPTPAPTT479
24Vesp m 5 P81657 7.08 2.5228 4.8076 65PGPQPPAKS73
25Vesp c 5 P35781 7.08 2.5228 4.8076 65PGPQPPAKS73
26Vesp v 5.0101 VA5_VESVE 7.08 2.5228 4.8076 65PGPQPPAKS73
27Vesp c 5 P35782 7.08 2.5228 4.8076 65PGPQPPAKS73
28Gly m conglycinin 18536 7.11 2.5049 4.7940 105PFPRPQPRQ113
29Gly m 5.0101 O22120 7.11 2.5049 4.7940 43PFPRPQPRQ51
30Gos h 2 P09799 7.23 2.4328 4.7390 311PAGQENPQS319
31Tri a gliadin 170718 7.24 2.4249 4.7330 61PQPQPFPSQ69
32Tri a gliadin 170716 7.24 2.4249 4.7330 64PQPQPFPSQ72
33Tri a gliadin 21765 7.24 2.4249 4.7330 61PQPQPFPSQ69
34Tri a gliadin 170712 7.24 2.4249 4.7330 64PQPQPFPSQ72
35Tri a gliadin 21761 7.24 2.4249 4.7330 64PQPQPFPSQ72
36Tri a gliadin 21673 7.24 2.4249 4.7330 64PQPQPFPSQ72
37Tri a gliadin 21757 7.24 2.4249 4.7330 64PQPQPFPSQ72
38Tri a gliadin 170722 7.24 2.4249 4.7330 64PQPQPFPSQ72
39Tri a gliadin 170720 7.24 2.4249 4.7330 64PQPQPFPSQ72
40Tri a gliadin 473876 7.24 2.4249 4.7330 64PQPQPFPSQ72
41Tri a gliadin 21753 7.24 2.4249 4.7330 64PQPQPFPSQ72
42Tri a gliadin 21755 7.24 2.4249 4.7330 64PQPQPFPSQ72
43Tri a gliadin 170710 7.24 2.4249 4.7330 64PQPQPFPSQ72
44Tri a gliadin 170740 7.24 2.4249 4.7330 64PQPQPFPSQ72
45Pac c 3.0101 VA5_BRACH 7.34 2.3700 4.6911 58PGPQPAASN66
46Pol d 5 P81656 7.34 2.3700 4.6911 67PGPQPAASN75
47Pol g 5 25091511 7.34 2.3700 4.6911 67PGPQPAASN75
48Tri a gliadin 170718 7.34 2.3669 4.6887 21PVPQLQPKN29
49Tri a gliadin 21765 7.34 2.3669 4.6887 21PVPQLQPKN29
50Der f 2 Q00855 7.35 2.3596 4.6832 110NVPKIAPKS118

Histogram for best protein-peptide similarity index
Number of windows: 1698
Average PD: 11.370446
Standard deviation: 1.701872
1 0.5 1
2 1.0 0
3 1.5 0
4 2.0 0
5 2.5 0
6 3.0 0
7 3.5 0
8 4.0 0
9 4.5 0
10 5.0 1
11 5.5 2
12 6.0 3
13 6.5 2
14 7.0 6
15 7.5 35
16 8.0 31
17 8.5 39
18 9.0 27
19 9.5 52
20 10.0 127
21 10.5 101
22 11.0 166
23 11.5 176
24 12.0 361
25 12.5 189
26 13.0 171
27 13.5 92
28 14.0 50
29 14.5 20
30 15.0 19
31 15.5 8
32 16.0 11
33 16.5 2
34 17.0 4
35 17.5 1
36 18.0 0
37 18.5 0
38 19.0 0
39 19.5 0
40 20.0 0

Histogram for all protein-peptide similarity indices
Number of windows: 400198
Average PD: 17.813583
Standard deviation: 2.233274
1 0.5 1
2 1.0 0
3 1.5 0
4 2.0 0
5 2.5 0
6 3.0 0
7 3.5 0
8 4.0 0
9 4.5 0
10 5.0 1
11 5.5 2
12 6.0 10
13 6.5 3
14 7.0 6
15 7.5 51
16 8.0 35
17 8.5 79
18 9.0 80
19 9.5 119
20 10.0 292
21 10.5 301
22 11.0 575
23 11.5 862
24 12.0 1544
25 12.5 2193
26 13.0 3242
27 13.5 4901
28 14.0 6987
29 14.5 9464
30 15.0 13293
31 15.5 16666
32 16.0 20648
33 16.5 25302
34 17.0 27959
35 17.5 32495
36 18.0 35121
37 18.5 36093
38 19.0 35896
39 19.5 32378
40 20.0 28383
41 20.5 22803
42 21.0 17141
43 21.5 11347
44 22.0 6967
45 22.5 3916
46 23.0 2048
47 23.5 711
48 24.0 226
49 24.5 47
50 25.0 7
Query sequence: PAPQPAPKS

SDAP Home Page | Search SDAP | SDAP Manual | SDAP FAQ | Contact  
UTMB | Search | Directories | UTMB Map | News | Employment | Sitemap 
This site published by Ovidiu Ivanciuc
Copyright   2001-2021  The University of Texas Medical Branch. Please review our privacy policy and Internet guidelines.