The University of Texas Medical Branch
Department of Biochemistry and Molecular Biology Sealy Center for Structural Biology Computational Biology


SDAP Home Page
SDAP Overview

Use SDAP
SDAP All
SDAP Food

SDAP Tools
FAO/WHO Allergenicity Test
FASTA Search in SDAP
Peptide Match
Peptide Similarity
Peptide-Protein PD Index
Aller_ML, Allergen Markup Language
List SDAP

About SDAP
General Information
Manual
FAQ
Publications
Who Are We
Advisory Board

Allergy Links

Our Software Tools
MPACK
FANTOM
GETAREA
NOAH/DIAMOD
MASIA
PCPMer
InterProSurf
EpiSearch

Allergen Databases
WHO/IUIS Allergen Nomenclature database
FARRP Allergen Protein Database (University of Nebraska)
Allergen Database for Food Safety (ADFS)
COMPARE database
ALLFAM (Medical University of Vienna)
Allermatch (Wageninen University)

Protein Databases
PDB
MMDB - Entrez
SWISS-PROT
NCBI - Entrez
PIR

Protein Classification
CATH
CE
FSSP
iProClass
ProtoMap
SCOP
TOPS
VAST

Bioinformatics Servers
@TOME
BLAST @ NCBI
BLAST @ PIR
FASTA @ PIR
Peptide Match @ PIR
ClustalW @ BCM
ClustalW @ EMBL - EBI
ClustalW @ PIR

Bioinformatics Tools
Cn3D
MolMol

Bioinformatics Links
Bioinformatics Links Directory

SDAP - All Allergens
Go to: SDAP All allergens       Go to: SDAP Food allergens
Send a comment to Ovidiu Ivanciuc      Submit new allergen information to SDAP
Last Updated: Nov 1, 2021  
Alphabetical listing of allergens: A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
Access to SDAP is available free of charge for Academic and non-profit use.
Licenses for commercial use can be obtained by contacting W. Braun (webraun@utmb.edu).
Secure access to SDAP is available from https://fermi.utmb.edu/SDAP

Search Results: Peptide Similarity

Query peptide: PDGRDTLRA

NoAllergenLink to NCBI/
PIR/SwissProt
PD Sequence
Similarity
Index
z(PD,min)z(PD,all)Start
Residue
Matching regionEnd
Residue
1Alt a 13.0101 Q6R4B4 0.00 7.7430 7.3559 72PDGRDTLRA80
2Bet v 1.2201 1321728 6.38 3.2813 4.7410 109PDGRSILKI117
3Bet v 1.0115 CAA96547 6.38 3.2813 4.7410 109PDGRSILKI117
4Ves v 6.0101 G8IIT0 6.97 2.8676 4.4985 63CNSPDTLRA71
5Tab y 1.0101 323473390 6.97 2.8670 4.4981 25PDSDNGLRE33
6Gly m conglycinin 18536 7.21 2.6965 4.3982 298PDNNENLRL306
7Gly m 5.0101 O22120 7.21 2.6965 4.3982 236PDNNENLRL244
8Vig r 2.0101 Q198W3 7.28 2.6520 4.3721 121PDGRDSYIL129
9Api m 2 Q08169 7.46 2.5246 4.2974 34PDNNKTVRE42
10Vig r 2.0101 Q198W3 7.58 2.4426 4.2494 148PNDNDNLRI156
11Pla or 2.0101 162949338 7.58 2.4359 4.2455 295PYGQCSLKA303
12Amb a 1 P27760 7.59 2.4357 4.2454 37NETRRSLKA45
13Lup an 1.0101 169950562 7.63 2.4030 4.2262 288PDDNQNLRV296
14Gly m conglycinin 169929 7.65 2.3926 4.2201 314PDNDENLRM322
15Gly m conglycinin 169929 7.65 2.3926 4.2201 333PDNDENLRM341
16Gly m 5.0201 Q9FZP9 7.65 2.3926 4.2201 252PDNDENLRM260
17Gly m conglycinin 18536 7.81 2.2767 4.1522 271NDDRDSYRL279
18Gly m 5.0101 O22120 7.81 2.2767 4.1522 209NDDRDSYRL217
19Api m 5.0101 B2D0J4 7.95 2.1837 4.0976 228PDGRHLAFA236
20Aed a 1 P50635 7.97 2.1632 4.0857 510ADGKDGFSA518
21Ani s 13.0101 K9USK2_9BILA 8.03 2.1233 4.0622 75YDDRETFDA83
22Vig r 2.0201 B1NPN8 8.07 2.0946 4.0455 150PDDNENLRI158
23Len c 1.0102 29539111 8.09 2.0814 4.0377 178PQHRRSLRD186
24Vig r 2.0201 B1NPN8 8.16 2.0325 4.0091 123PDGRDSNIL131
25Pol d 3.0101 XP_015174445 8.18 2.0195 4.0015 227PDGKRLAYA235
26Pan h 3.0101 XP_026771637 8.18 2.0167 3.9998 193PDGDHDLKR201
27Sal s 3.0101 B5DGM7 8.18 2.0167 3.9998 193PDGDHDLKR201
28Eur m 14 6492307 8.19 2.0105 3.9961 491TDAEPSLRA499
29Asp n 14 4235093 8.20 2.0055 3.9932 217PDPDSNLKL225
30Dol m 5.0101 P10736 8.22 1.9891 3.9836 48NCGRNVVKA56
31Hel a 6.0101 A0A251RNJ1_HELAN 8.24 1.9809 3.9788 33PPTRRSMQA41
32Tri a 39.0101 J7QW61_WHEAT 8.24 1.9758 3.9758 8PEGRNTDTS16
33Pha v 1 21048 8.26 1.9644 3.9691 127PPNEDELKA135
34Pha v 1 P25985 8.26 1.9644 3.9691 127PPNEDELKA135
35Vig r 1.0101 Q2VU97 8.26 1.9644 3.9691 127PPNEDELKA135
36Pha v 1 21044 8.26 1.9644 3.9691 128PPNEDELKA136
37Asp n 14 2181180 8.26 1.9641 3.9690 217PDPESNLKL225
38Ara h 1 P43237 8.32 1.9190 3.9425 309GFSRNTLEA317
39Ara h 1 P43238 8.32 1.9190 3.9425 315GFSRNTLEA323
40Gos h 1 P09801.1 8.34 1.9042 3.9338 246TNGRGTLTF254
41Gos h 2 P09799 8.35 1.8981 3.9303 344PGGRQSHRR352
42Cha o 2.0101 47606004 8.36 1.8963 3.9292 284SLGRDNSRA292
43For t 2.0101 188572343 8.36 1.8927 3.9271 296PDGRSYATG304
44Aca f 1 A0A0K1SC24_VACFA 8.36 1.8917 3.9265 47TAGTQTFKA55
45Pro j 1.0101 AKV72167 8.36 1.8917 3.9265 47TAGTQTFKA55
46Che a 1 22074346 8.36 1.8917 3.9265 66TAGTQTFKA74
47Koc s 1.0101 A0A0K1SC44_BASSC 8.36 1.8917 3.9265 65TAGTQTFKA73
48Ama r 1.0101 A0A0K1SC10_AMARE 8.36 1.8917 3.9265 66TAGTQTFKA74
49Der f 35.0101 BAX34757 8.44 1.8397 3.8961 115PNIKGTLTA123
50Der f 1.0110 119633264 8.48 1.8114 3.8795 252YDGRTIIRH260

Histogram for best protein-peptide similarity index
Number of windows: 1698
Average PD: 11.066170
Standard deviation: 1.429180
1 0.5 1
2 1.0 0
3 1.5 0
4 2.0 0
5 2.5 0
6 3.0 0
7 3.5 0
8 4.0 0
9 4.5 0
10 5.0 0
11 5.5 0
12 6.0 0
13 6.5 2
14 7.0 2
15 7.5 4
16 8.0 7
17 8.5 31
18 9.0 48
19 9.5 131
20 10.0 151
21 10.5 227
22 11.0 176
23 11.5 280
24 12.0 261
25 12.5 138
26 13.0 109
27 13.5 51
28 14.0 40
29 14.5 19
30 15.0 7
31 15.5 4
32 16.0 4
33 16.5 0
34 17.0 2
35 17.5 1
36 18.0 0

Histogram for all protein-peptide similarity indices
Number of windows: 400198
Average PD: 17.937538
Standard deviation: 2.438528
1 0.5 1
2 1.0 0
3 1.5 0
4 2.0 0
5 2.5 0
6 3.0 0
7 3.5 0
8 4.0 0
9 4.5 0
10 5.0 0
11 5.5 0
12 6.0 0
13 6.5 2
14 7.0 2
15 7.5 4
16 8.0 11
17 8.5 32
18 9.0 50
19 9.5 160
20 10.0 249
21 10.5 463
22 11.0 599
23 11.5 1158
24 12.0 1897
25 12.5 2516
26 13.0 4095
27 13.5 5313
28 14.0 7663
29 14.5 10433
30 15.0 13015
31 15.5 17191
32 16.0 20188
33 16.5 23328
34 17.0 27106
35 17.5 29560
36 18.0 31609
37 18.5 32712
38 19.0 31440
39 19.5 30275
40 20.0 26867
41 20.5 23343
42 21.0 18473
43 21.5 14564
44 22.0 10582
45 22.5 7009
46 23.0 4250
47 23.5 2237
48 24.0 1060
49 24.5 445
50 25.0 193
51 25.5 70
52 26.0 21
Query sequence: PDGRDTLRA

SDAP Home Page | Search SDAP | SDAP Manual | SDAP FAQ | Contact  
UTMB | Search | Directories | UTMB Map | News | Employment | Sitemap 
This site published by Ovidiu Ivanciuc
Copyright   2001-2021  The University of Texas Medical Branch. Please review our privacy policy and Internet guidelines.