The University of Texas Medical Branch
Department of Biochemistry and Molecular Biology Sealy Center for Structural Biology Computational Biology


SDAP Home Page
SDAP Overview

Use SDAP
SDAP All
SDAP Food

SDAP Tools
FAO/WHO Allergenicity Test
FASTA Search in SDAP
Peptide Match
Peptide Similarity
Peptide-Protein PD Index
Aller_ML, Allergen Markup Language
List SDAP

About SDAP
General Information
Manual
FAQ
Publications
Who Are We
Advisory Board

Allergy Links

Our Software Tools
MPACK
FANTOM
GETAREA
NOAH/DIAMOD
MASIA
PCPMer
InterProSurf
EpiSearch

Allergen Databases
WHO/IUIS Allergen Nomenclature database
FARRP Allergen Protein Database (University of Nebraska)
Allergen Database for Food Safety (ADFS)
COMPARE database
ALLFAM (Medical University of Vienna)
Allermatch (Wageninen University)

Protein Databases
PDB
MMDB - Entrez
SWISS-PROT
NCBI - Entrez
PIR

Protein Classification
CATH
CE
FSSP
iProClass
ProtoMap
SCOP
TOPS
VAST

Bioinformatics Servers
@TOME
BLAST @ NCBI
BLAST @ PIR
FASTA @ PIR
Peptide Match @ PIR
ClustalW @ BCM
ClustalW @ EMBL - EBI
ClustalW @ PIR

Bioinformatics Tools
Cn3D
MolMol

Bioinformatics Links
Bioinformatics Links Directory

SDAP - All Allergens
Go to: SDAP All allergens       Go to: SDAP Food allergens
Send a comment to Ovidiu Ivanciuc      Submit new allergen information to SDAP
Last Updated: Nov 1, 2021  
Alphabetical listing of allergens: A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
Access to SDAP is available free of charge for Academic and non-profit use.
Licenses for commercial use can be obtained by contacting W. Braun (webraun@utmb.edu).
Secure access to SDAP is available from https://fermi.utmb.edu/SDAP

Search Results: Peptide Similarity

Query peptide: PGAAPDKRA

NoAllergenLink to NCBI/
PIR/SwissProt
PD Sequence
Similarity
Index
z(PD,min)z(PD,all)Start
Residue
Matching regionEnd
Residue
1Sal k 1.0201 51242679 0.00 7.2836 7.9806 322PGAAPDKRA330
2Sal k 1.0302 59895728 4.31 4.5306 6.0837 299PGAAADKRV307
3Sal k 1.0301 59895730 4.31 4.5306 6.0837 299PGAAADKRV307
4Pen c 19 Q92260 6.07 3.4133 5.3138 481GGAPPQQRA489
5Ole e 11.0101 269996495 6.23 3.3054 5.2395 321PGANMEKRA329
6Lat c 6.0201 XP_018553992 6.70 3.0091 5.0354 684PGAAGNDGA692
7Sal s 4.0101 NP_001117128 6.80 2.9442 4.9906 23EGAEGDKKA31
8Art v 1.0101 27818334 6.82 2.9334 4.9832 89PGAAPPPAA97
9Art la 1.0101 ANC85013 6.82 2.9334 4.9832 89PGAAPPPAA97
10Art si 1.0101 ANC85015 6.82 2.9334 4.9832 89PGAAPPPAA97
11Art ar 1.0101 ANC85008 6.82 2.9334 4.9832 89PGAAPPPAA97
12Art c 1.0101 AHF71023 6.82 2.9334 4.9832 65PGAAPPPAA73
13Art si 1.0102 ANC85016 6.82 2.9334 4.9832 89PGAAPPPAA97
14Art f 1.0101 AHF71024 6.82 2.9334 4.9832 65PGAAPPPAA73
15Art ca 1.0101 ANC85010 6.82 2.9334 4.9832 89PGAAPPPAA97
16Art an 1.0102 ANC85006 6.82 2.9334 4.9832 89PGAAPPPAA97
17Art l 1.0101 AHF71025 6.82 2.9334 4.9832 65PGAAPPPAA73
18Art t 1.0101 AHF71026 6.82 2.9334 4.9832 65PGAAPPPAA73
19Ves m 1 P51528 7.23 2.6720 4.8031 100PTAASNTRL108
20Sal s 6.0102 XP_014048044 7.46 2.5253 4.7020 460PGAAGARGA468
21Cyn d 1.0204 10314021 7.49 2.5047 4.6878 31RGAAPDDHG39
22Cyn d 1 O04701 7.49 2.5047 4.6878 31RGAAPDDHG39
23Cyn d 1.0203 16076697 7.49 2.5047 4.6878 49RGAAPDDHG57
24Cyn d 1.0202 16076693 7.49 2.5047 4.6878 49RGAAPDDHG57
25Cyn d 1.0201 15384338 7.49 2.5047 4.6878 31RGAAPDDHG39
26Uro m 1.0101 A0A4D6FZ45_9POAL 7.49 2.5047 4.6878 49RGAAPDDHG57
27Cyn d 1 16076695 7.49 2.5047 4.6878 49RGAAPDDHG57
28Gly m 6.0101 P04776 7.64 2.4114 4.6235 485PPQESQKRA493
29Gly m glycinin G1 169973 7.64 2.4114 4.6235 485PPQESQKRA493
30Zoy m 1.0101 QCX36431 7.74 2.3471 4.5792 59RGAAPDDDG67
31Ara h 2.0201 26245447 7.76 2.3302 4.5676 74PSQDPDRRD82
32Hev b 7.02 3087805 7.87 2.2629 4.5212 362PGASTNEAA370
33Per a 8.0101 H6WP59_PERAM 7.92 2.2277 4.4969 31PAAEPNRQS39
34Ano d 2.01 Q7YT43_9DIPT 7.97 2.1950 4.4744 40NSILPNKQA48
35Tri a glutenin 170743 8.07 2.1349 4.4330 123PGQASSQRP131
36Tri a glutenin 21743 8.07 2.1349 4.4330 123PGQASSQRP131
37Ves v 1 P49369 8.23 2.0325 4.3625 136PTAARNTRL144
38Lat c 6.0301 XP_018522130 8.28 2.0020 4.3415 186PGAAGPKGE194
39Art gm 1.0101 ANC85011 8.28 1.9972 4.3382 89PGAAPPPAT97
40Gal d 3 757851 8.31 1.9802 4.3264 509PGSPPNSRL517
41Gal d 3 P02789 8.31 1.9802 4.3264 509PGSPPNSRL517
42Cof a 2.0101 AGL34967.1 8.32 1.9731 4.3216 42LGVAPPKTA50
43Lat c 6.0201 XP_018553992 8.34 1.9589 4.3117 825PGAAGPTGA833
44Sal s 6.0102 XP_014048044 8.38 1.9356 4.2957 685PGSAGNDGA693
45Sal s 6.0101 XP_014059932 8.38 1.9356 4.2957 685PGSAGNDGA693
46Gly m glycinin G2 295800 8.44 1.9010 4.2718 475PPQESQRRA483
47Gly m 6.0201 P04405 8.44 1.9010 4.2718 475PPQESQRRA483
48Api m 9.0101 226533687 8.46 1.8837 4.2599 405PGAEKYKTA413
49Vesp c 1.0101 226533687 8.46 1.8826 4.2592 100PYAASNTRL108
50Hor v 1 439275 8.48 1.8720 4.2519 66PGDTPKDRC74

Histogram for best protein-peptide similarity index
Number of windows: 1698
Average PD: 11.414206
Standard deviation: 1.567101
1 0.5 1
2 1.0 0
3 1.5 0
4 2.0 0
5 2.5 0
6 3.0 0
7 3.5 0
8 4.0 0
9 4.5 2
10 5.0 0
11 5.5 0
12 6.0 0
13 6.5 2
14 7.0 13
15 7.5 9
16 8.0 7
17 8.5 18
18 9.0 70
19 9.5 56
20 10.0 81
21 10.5 152
22 11.0 192
23 11.5 267
24 12.0 205
25 12.5 247
26 13.0 191
27 13.5 77
28 14.0 49
29 14.5 22
30 15.0 14
31 15.5 6
32 16.0 5
33 16.5 8
34 17.0 1
35 17.5 1
36 18.0 1
37 18.5 0
38 19.0 0
39 19.5 0

Histogram for all protein-peptide similarity indices
Number of windows: 400198
Average PD: 18.151150
Standard deviation: 2.274418
1 0.5 1
2 1.0 0
3 1.5 0
4 2.0 0
5 2.5 0
6 3.0 0
7 3.5 0
8 4.0 0
9 4.5 2
10 5.0 0
11 5.5 0
12 6.0 0
13 6.5 2
14 7.0 13
15 7.5 9
16 8.0 7
17 8.5 20
18 9.0 72
19 9.5 74
20 10.0 120
21 10.5 266
22 11.0 433
23 11.5 759
24 12.0 1018
25 12.5 1659
26 13.0 2884
27 13.5 3899
28 14.0 5485
29 14.5 8206
30 15.0 11235
31 15.5 14208
32 16.0 18668
33 16.5 21462
34 17.0 27247
35 17.5 29533
36 18.0 34007
37 18.5 34170
38 19.0 35038
39 19.5 33723
40 20.0 29961
41 20.5 25722
42 21.0 20573
43 21.5 15720
44 22.0 10619
45 22.5 6724
46 23.0 3741
47 23.5 1778
48 24.0 863
49 24.5 207
50 25.0 59
51 25.5 10
Query sequence: PGAAPDKRA

SDAP Home Page | Search SDAP | SDAP Manual | SDAP FAQ | Contact  
UTMB | Search | Directories | UTMB Map | News | Employment | Sitemap 
This site published by Ovidiu Ivanciuc
Copyright   2001-2021  The University of Texas Medical Branch. Please review our privacy policy and Internet guidelines.