The University of Texas Medical Branch
Department of Biochemistry and Molecular Biology Sealy Center for Structural Biology Computational Biology


SDAP Home Page
SDAP Overview

Use SDAP
SDAP All
SDAP Food

SDAP Tools
FAO/WHO Allergenicity Test
FASTA Search in SDAP
Peptide Match
Peptide Similarity
Peptide-Protein PD Index
Aller_ML, Allergen Markup Language
List SDAP

About SDAP
General Information
Manual
FAQ
Publications
Who Are We
Advisory Board

Allergy Links

Our Software Tools
MPACK
FANTOM
GETAREA
NOAH/DIAMOD
MASIA
PCPMer
InterProSurf
EpiSearch

Allergen Databases
WHO/IUIS Allergen Nomenclature database
FARRP Allergen Protein Database (University of Nebraska)
Allergen Database for Food Safety (ADFS)
COMPARE database
ALLFAM (Medical University of Vienna)
Allermatch (Wageninen University)

Protein Databases
PDB
MMDB - Entrez
SWISS-PROT
NCBI - Entrez
PIR

Protein Classification
CATH
CE
FSSP
iProClass
ProtoMap
SCOP
TOPS
VAST

Bioinformatics Servers
@TOME
BLAST @ NCBI
BLAST @ PIR
FASTA @ PIR
Peptide Match @ PIR
ClustalW @ BCM
ClustalW @ EMBL - EBI
ClustalW @ PIR

Bioinformatics Tools
Cn3D
MolMol

Bioinformatics Links
Bioinformatics Links Directory

SDAP - All Allergens
Go to: SDAP All allergens       Go to: SDAP Food allergens
Send a comment to Ovidiu Ivanciuc      Submit new allergen information to SDAP
Last Updated: Nov 1, 2021  
Alphabetical listing of allergens: A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
Access to SDAP is available free of charge for Academic and non-profit use.
Licenses for commercial use can be obtained by contacting W. Braun (webraun@utmb.edu).
Secure access to SDAP is available from https://fermi.utmb.edu/SDAP

Search Results: Peptide Similarity

Query peptide: PGKCGVNVP

NoAllergenLink to NCBI/
PIR/SwissProt
PD Sequence
Similarity
Index
z(PD,min)z(PD,all)Start
Residue
Matching regionEnd
Residue
1Pru d 3 P82534 0.00 4.5754 7.5824 70PGKCGVNVP78
2Mal d 3 Q9M5X7 0.00 4.5754 7.5824 94PGKCGVNVP102
3Pru av 3 Q9M5X8 0.00 4.5754 7.5824 96PGKCGVNVP104
4Pyr c 3 Q9M5X6 0.00 4.5754 7.5824 94PGKCGVNVP102
5Fra a 3.0202 Q4PLT6 0.00 4.5754 7.5824 96PGKCGVNVP104
6Pru du 3.0101 223667948 0.61 4.3326 7.3411 102PGKCGVNIP110
7Pru ar 3 P81651 0.61 4.3326 7.3411 70PGKCGVNIP78
8Cor a 8 13507262 0.61 4.3326 7.3411 94PGKCGVNIP102
9Len c 3.0101 A0AT29 0.61 4.3326 7.3411 96PGKCGVNIP104
10Pha v 3.0101 289064177 0.61 4.3326 7.3411 94PGKCGVNIP102
11Hev b 12 20135538 0.61 4.3326 7.3411 95PGKCGVNIP103
12Lup an 3.0101 XP_019446786 0.61 4.3326 7.3411 95PGKCGVNIP103
13Mor n 3.0101 P85894 0.87 4.2269 7.2361 70PGKCGVSVP78
14Fra a 3.0102 Q4PLT9 0.87 4.2269 7.2361 96PGKCGVSVP104
15Rub i 3.0101 Q0Z8V0 0.87 4.2269 7.2361 96PGKCGVSVP104
16Fra a 3.0101 Q8VX12 0.87 4.2269 7.2361 96PGKCGVSVP104
17Fra a 3.0201 Q4PLU0 0.87 4.2269 7.2361 96PGKCGVSVP104
18Ara h 17.0101 A0A510A9S3_ARAHY 1.48 3.9840 6.9947 72PGKCGVSIP80
19Pun g 1.0201 A0A059SSZ0_PUNGR 1.48 3.9840 6.9947 99PGKCGVSIP107
20Can s 3.0101 W0U0V5_CANSA 1.48 3.9840 6.9947 70PGKCGVSIP78
21Pru p 3 17974195 1.48 3.9840 6.9947 70PGKCGVSIP78
22Pun g 1.0301 A0A059ST23_PUNGR 1.48 3.9840 6.9947 99PGKCGVSIP107
23Pis s 3.0101 NLTP1_PEA 1.48 3.9840 6.9947 98PGKCGVSIP106
24Pha v 3.0201 289064179 1.48 3.9840 6.9947 96PGKCGVSIP104
25Art v 3.0202 189544584 1.76 3.8712 6.8826 95PSKCGVNIP103
26Art ar 3.0102 ANC85020 1.76 3.8712 6.8826 95PSKCGVNIP103
27Art si 3.0102 ANC85027 1.76 3.8712 6.8826 95PSKCGVNIP103
28Art an 3.0101 ANC85017 1.76 3.8712 6.8826 96PSKCGVNIP104
29Art an 3.0102 ANC85018 1.76 3.8712 6.8826 96PSKCGVNIP104
30Art gm 3.0101 ANC85022 1.76 3.8712 6.8826 96PSKCGVNIP104
31Art v 3.0201 189544577 1.76 3.8712 6.8826 93PSKCGVNIP101
32Art gm 3.0102 ANC85023 1.76 3.8712 6.8826 96PSKCGVNIP104
33Art ca 3.0101 ANC85021 1.76 3.8712 6.8826 96PSKCGVNIP104
34Art ca 3.0102 QIN55516 1.76 3.8712 6.8826 96PSKCGVNIP104
35Art la 3.0101 ANC85024 1.76 3.8712 6.8826 95PSKCGVNIP103
36Art ar 3.0101 ANC85019 1.76 3.8712 6.8826 95PSKCGVNIP103
37Pru p 3 P81402 1.98 3.7835 6.7954 70PGKCGVHIP78
38Ara h 9.0101 161087230 2.28 3.6641 6.6768 94PGRCGVSIP102
39Ara h 9.0201 161610580 2.28 3.6641 6.6768 70PGRCGVSIP78
40Tri tu 14.0101 CAH69206 2.52 3.5656 6.5789 94PTKCGVSVP102
41Tri a 14.0101 19846220 2.55 3.5565 6.5699 70PPKCGVNLP78
42Zea m 14.0101 P19656-1 2.63 3.5226 6.5362 99PSKCGVSIP107
43Zea m 14.0102 P19656-2 2.63 3.5226 6.5362 99PSKCGVSIP107
44Pun g 1.0101 A0A059STC4_PUNGR 2.66 3.5096 6.5232 99PAKCGVNIP107
45Api g 2 256600126 2.79 3.4584 6.4724 97PGKCGIRIP105
46Hor v 1 167077 2.87 3.4271 6.4413 96PSKCNVNVP104
47Hor v 1 19039 2.87 3.4271 6.4413 96PSKCNVNVP104
48Art si 3.0101 ANC85026 2.96 3.3918 6.4062 95PSKCGVTIP103
49Art la 3.0102 ANC85025 3.12 3.3275 6.3423 94PSKCGLNLP102
50Art v 3.0301 189544589 3.12 3.3275 6.3423 96PSKCGLNLP104

Histogram for best protein-peptide similarity index
Number of windows: 1698
Average PD: 11.439352
Standard deviation: 2.500160
1 0.5 5
2 1.0 12
3 1.5 7
4 2.0 13
5 2.5 2
6 3.0 9
7 3.5 4
8 4.0 2
9 4.5 0
10 5.0 2
11 5.5 1
12 6.0 9
13 6.5 1
14 7.0 3
15 7.5 5
16 8.0 11
17 8.5 31
18 9.0 24
19 9.5 77
20 10.0 127
21 10.5 120
22 11.0 114
23 11.5 157
24 12.0 152
25 12.5 199
26 13.0 203
27 13.5 151
28 14.0 107
29 14.5 92
30 15.0 32
31 15.5 10
32 16.0 9
33 16.5 4
34 17.0 1
35 17.5 0
36 18.0 0
37 18.5 1
38 19.0 0
39 19.5 0
40 20.0 0
41 20.5 0
42 21.0 0
43 21.5 0
44 22.0 0
45 22.5 0
46 23.0 0
47 23.5 0
48 24.0 0
49 24.5 0

Histogram for all protein-peptide similarity indices
Number of windows: 400198
Average PD: 19.076350
Standard deviation: 2.515858
1 0.5 5
2 1.0 12
3 1.5 7
4 2.0 13
5 2.5 2
6 3.0 9
7 3.5 4
8 4.0 2
9 4.5 0
10 5.0 2
11 5.5 1
12 6.0 9
13 6.5 1
14 7.0 3
15 7.5 5
16 8.0 11
17 8.5 32
18 9.0 31
19 9.5 92
20 10.0 167
21 10.5 196
22 11.0 280
23 11.5 467
24 12.0 771
25 12.5 1144
26 13.0 1821
27 13.5 2653
28 14.0 3800
29 14.5 5391
30 15.0 6910
31 15.5 9265
32 16.0 12425
33 16.5 15729
34 17.0 18392
35 17.5 23042
36 18.0 26150
37 18.5 27900
38 19.0 30210
39 19.5 31528
40 20.0 31832
41 20.5 30039
42 21.0 28084
43 21.5 24405
44 22.0 20338
45 22.5 16076
46 23.0 11453
47 23.5 7843
48 24.0 5233
49 24.5 3304
50 25.0 1804
51 25.5 819
52 26.0 399
53 26.5 69
Query sequence: PGKCGVNVP

SDAP Home Page | Search SDAP | SDAP Manual | SDAP FAQ | Contact  
UTMB | Search | Directories | UTMB Map | News | Employment | Sitemap 
This site published by Ovidiu Ivanciuc
Copyright   2001-2021  The University of Texas Medical Branch. Please review our privacy policy and Internet guidelines.