The University of Texas Medical Branch
Department of Biochemistry and Molecular Biology Sealy Center for Structural Biology Computational Biology


SDAP Home Page
SDAP Overview

Use SDAP
SDAP All
SDAP Food

SDAP Tools
FAO/WHO Allergenicity Test
FASTA Search in SDAP
Peptide Match
Peptide Similarity
Peptide-Protein PD Index
Aller_ML, Allergen Markup Language
List SDAP

About SDAP
General Information
Manual
FAQ
Publications
Who Are We
Advisory Board

Allergy Links

Our Software Tools
MPACK
FANTOM
GETAREA
NOAH/DIAMOD
MASIA
PCPMer
InterProSurf
EpiSearch

Allergen Databases
WHO/IUIS Allergen Nomenclature database
FARRP Allergen Protein Database (University of Nebraska)
Allergen Database for Food Safety (ADFS)
COMPARE database
ALLFAM (Medical University of Vienna)
Allermatch (Wageninen University)

Protein Databases
PDB
MMDB - Entrez
SWISS-PROT
NCBI - Entrez
PIR

Protein Classification
CATH
CE
FSSP
iProClass
ProtoMap
SCOP
TOPS
VAST

Bioinformatics Servers
@TOME
BLAST @ NCBI
BLAST @ PIR
FASTA @ PIR
Peptide Match @ PIR
ClustalW @ BCM
ClustalW @ EMBL - EBI
ClustalW @ PIR

Bioinformatics Tools
Cn3D
MolMol

Bioinformatics Links
Bioinformatics Links Directory

SDAP - All Allergens
Go to: SDAP All allergens       Go to: SDAP Food allergens
Send a comment to Ovidiu Ivanciuc      Submit new allergen information to SDAP
Last Updated: Nov 1, 2021  
Alphabetical listing of allergens: A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
Access to SDAP is available free of charge for Academic and non-profit use.
Licenses for commercial use can be obtained by contacting W. Braun (webraun@utmb.edu).
Secure access to SDAP is available from https://fermi.utmb.edu/SDAP

Search Results: Peptide Similarity

Query peptide: PGPDCDAKA

NoAllergenLink to NCBI/
PIR/SwissProt
PD Sequence
Similarity
Index
z(PD,min)z(PD,all)Start
Residue
Matching regionEnd
Residue
1Pol d 2.0101 XP_015179722 0.00 7.8386 7.9507 220PGPDCDAKA228
2Pol a 2 Q9U6V9 0.00 7.8386 7.9507 222PGPDCDAKA230
3Poly p 2.0101 HUGA_POLPI 0.00 7.8386 7.9507 150PGPDCDAKA158
4Sor h 13.0201 A0A077B569_SORHL 6.96 3.1510 4.9321 27PAKDGDAKA35
5Vesp c 5 P35781 7.24 2.9658 4.8128 65PGPQPPAKS73
6Vesp c 5 P35782 7.24 2.9658 4.8128 65PGPQPPAKS73
7Vesp m 5 P81657 7.24 2.9658 4.8128 65PGPQPPAKS73
8Vesp v 5.0101 VA5_VESVE 7.24 2.9658 4.8128 65PGPQPPAKS73
9Dol m 5.02 P10737 7.59 2.7261 4.6584 75PGPQPPAKN83
10Dol m 5.02 552080 7.59 2.7261 4.6584 75PGPQPPAKN83
11Ves p 5 P35785 7.59 2.7261 4.6584 65PGPQPPAKN73
12Ves f 5 P35783 7.59 2.7261 4.6584 65PGPQPPAKN73
13Dol a 5 Q05108 7.59 2.7261 4.6584 64PGPQPPAKN72
14Ves s 5 P35786 7.59 2.7261 4.6584 66PGPQPPAKN74
15Ves vi 5 P35787 7.59 2.7261 4.6584 67PGPQPPAKN75
16Ves m 5 P35760 7.59 2.7261 4.6584 65PGPQPPAKN73
17Dol m 5.0101 P10736 7.59 2.7261 4.6584 88PGPQPPAKN96
18Ves g 5 P35784 7.59 2.7261 4.6584 65PGPQPPAKN73
19Ves v 5 Q05110 7.59 2.7261 4.6584 88PGPQPPAKN96
20Dol m 2 P49371 7.66 2.6840 4.6314 193LVPDCDATA201
21Myr p 2.0101 Q26464 7.79 2.5970 4.5753 20HAPNVEAKA28
22Myr p 2.0101 1587177 7.79 2.5970 4.5753 20HAPNVEAKA28
23Asp n 14 4235093 7.85 2.5536 4.5473 217PDPDSNLKL225
24Gal d 1 P01005 7.86 2.5443 4.5413 166PKPDCTAED174
25Act d 8.0101 281552898 7.89 2.5246 4.5287 120YTPKCDAQV128
26Tri r 2.0101 5813790 7.93 2.4996 4.5126 249GGGNGTAKA257
27Der p 14.0101 20385544 8.02 2.4391 4.4736 798MGYEYDAKA806
28Myr p 3.0101 51241753 8.05 2.4216 4.4623 20HAPNVKAKA28
29Lol p 1.0101 168316 8.06 2.4125 4.4565 29PGPNITAEY37
30Lol p 1 P14946 8.06 2.4125 4.4565 29PGPNITAEY37
31Pha a 1 Q41260 8.06 2.4125 4.4565 35PGPNITAEY43
32Lol p 1.0102 168314 8.06 2.4125 4.4565 18PGPNITAEY26
33Lol p 1.0103 6599300 8.06 2.4125 4.4565 29PGPNITAEY37
34Lat c 6.0301 XP_018522130 8.08 2.3988 4.4477 516PGPDGNNGA524
35Act d 7.0101 P85076 8.08 2.3967 4.4463 272PGSNTTARV280
36Sola l 6.0101 A0A3Q7F7X3_SOLLC 8.14 2.3576 4.4212 47PSQDCCARL55
37Gly m 8 2SS_SOYBN 8.28 2.2627 4.3600 105RSPKCQCKA113
38Api m 4.0101 P01501 8.29 2.2592 4.3578 27PAPEPEAEA35
39Pla or 2.0101 162949338 8.39 2.1920 4.3145 295PYGQCSLKA303
40Lol p 5 Q40240 8.41 2.1776 4.3053 98SSPTSAAKA106
41Tri a TAI 21711 8.43 2.1647 4.2970 58PGPPYLAKQ66
42Tri a 40.0101 Q41540_WHEAT 8.43 2.1647 4.2970 58PGPPYLAKQ66
43Hor v 1 452323 8.43 2.1647 4.2970 58PGPPYLAKQ66
44Ves v 2.0201 60203063 8.50 2.1130 4.2637 195PSFDCDALS203
45Lat c 6.0101 XP_018521723 8.52 2.1006 4.2557 817TGPKGDAGA825
46Api m 2 Q08169 8.59 2.0546 4.2260 335SSDDINTKA343
47Sal s 6.0102 XP_014048044 8.60 2.0471 4.2212 673PGPSGPAGA681
48Sal s 6.0101 XP_014059932 8.60 2.0471 4.2212 673PGPSGPAGA681
49Ant o 1.0101 Q7M1X6 8.60 2.0455 4.2202 6PGPNITATY14
50Hol l 1.0102 1167836 8.60 2.0455 4.2202 14PGPNITATY22

Histogram for best protein-peptide similarity index
Number of windows: 1698
Average PD: 11.642562
Standard deviation: 1.485277
1 0.5 3
2 1.0 0
3 1.5 0
4 2.0 0
5 2.5 0
6 3.0 0
7 3.5 0
8 4.0 0
9 4.5 0
10 5.0 0
11 5.5 0
12 6.0 0
13 6.5 0
14 7.0 1
15 7.5 4
16 8.0 18
17 8.5 17
18 9.0 35
19 9.5 35
20 10.0 64
21 10.5 105
22 11.0 198
23 11.5 238
24 12.0 279
25 12.5 265
26 13.0 176
27 13.5 157
28 14.0 55
29 14.5 12
30 15.0 11
31 15.5 7
32 16.0 6
33 16.5 4
34 17.0 2
35 17.5 4

Histogram for all protein-peptide similarity indices
Number of windows: 400198
Average PD: 18.338217
Standard deviation: 2.306490
1 0.5 3
2 1.0 0
3 1.5 0
4 2.0 0
5 2.5 0
6 3.0 0
7 3.5 0
8 4.0 0
9 4.5 0
10 5.0 0
11 5.5 0
12 6.0 0
13 6.5 0
14 7.0 1
15 7.5 4
16 8.0 18
17 8.5 17
18 9.0 38
19 9.5 44
20 10.0 81
21 10.5 162
22 11.0 324
23 11.5 523
24 12.0 871
25 12.5 1478
26 13.0 2262
27 13.5 3559
28 14.0 5208
29 14.5 7164
30 15.0 10466
31 15.5 13809
32 16.0 17314
33 16.5 21385
34 17.0 25244
35 17.5 28436
36 18.0 31377
37 18.5 33883
38 19.0 34242
39 19.5 33309
40 20.0 30710
41 20.5 26721
42 21.0 22374
43 21.5 17499
44 22.0 12976
45 22.5 8523
46 23.0 5045
47 23.5 2862
48 24.0 1519
49 24.5 528
50 25.0 179
51 25.5 32
Query sequence: PGPDCDAKA

SDAP Home Page | Search SDAP | SDAP Manual | SDAP FAQ | Contact  
UTMB | Search | Directories | UTMB Map | News | Employment | Sitemap 
This site published by Ovidiu Ivanciuc
Copyright   2001-2021  The University of Texas Medical Branch. Please review our privacy policy and Internet guidelines.