The University of Texas Medical Branch
Department of Biochemistry and Molecular Biology Sealy Center for Structural Biology Computational Biology


SDAP Home Page
SDAP Overview

Use SDAP
SDAP All
SDAP Food

SDAP Tools
FAO/WHO Allergenicity Test
FASTA Search in SDAP
Peptide Match
Peptide Similarity
Peptide-Protein PD Index
Aller_ML, Allergen Markup Language
List SDAP

About SDAP
General Information
Manual
FAQ
Publications
Who Are We
Advisory Board

Allergy Links

Our Software Tools
MPACK
FANTOM
GETAREA
NOAH/DIAMOD
MASIA
PCPMer
InterProSurf
EpiSearch

Allergen Databases
WHO/IUIS Allergen Nomenclature database
FARRP Allergen Protein Database (University of Nebraska)
Allergen Database for Food Safety (ADFS)
COMPARE database
ALLFAM (Medical University of Vienna)
Allermatch (Wageninen University)

Protein Databases
PDB
MMDB - Entrez
SWISS-PROT
NCBI - Entrez
PIR

Protein Classification
CATH
CE
FSSP
iProClass
ProtoMap
SCOP
TOPS
VAST

Bioinformatics Servers
@TOME
BLAST @ NCBI
BLAST @ PIR
FASTA @ PIR
Peptide Match @ PIR
ClustalW @ BCM
ClustalW @ EMBL - EBI
ClustalW @ PIR

Bioinformatics Tools
Cn3D
MolMol

Bioinformatics Links
Bioinformatics Links Directory

SDAP - All Allergens
Go to: SDAP All allergens       Go to: SDAP Food allergens
Send a comment to Ovidiu Ivanciuc      Submit new allergen information to SDAP
Last Updated: Nov 1, 2021  
Alphabetical listing of allergens: A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
Access to SDAP is available free of charge for Academic and non-profit use.
Licenses for commercial use can be obtained by contacting W. Braun (webraun@utmb.edu).
Secure access to SDAP is available from https://fermi.utmb.edu/SDAP

Search Results: Peptide Similarity

Query peptide: PSSSRSSRS

NoAllergenLink to NCBI/
PIR/SwissProt
PD Sequence
Similarity
Index
z(PD,min)z(PD,all)Start
Residue
Matching regionEnd
Residue
1Jug n 4.0101 JUGN4_JUGNI 0.00 6.0194 7.1993 496PSSSRSSRS504
2Jug r 4.0101 Q2TPW5 1.95 4.9232 6.3572 493PSRSRSSRS501
3Gal d vitellogenin 212881 2.32 4.7174 6.1991 1169SSSSRSSKS1177
4Gal d vitellogenin 63887 2.32 4.7174 6.1991 1167SSSSRSSKS1175
5Gal d 6.0101 VIT1_CHICK 3.21 4.2166 5.8144 1197KSSSRSSKS1205
6gal d 6.0101 P87498 3.21 4.2166 5.8144 1197KSSSRSSKS1205
7Gal d vitellogenin 63887 3.47 4.0699 5.7017 1283SSSSSSSRS1291
8Gal d vitellogenin 63887 3.47 4.0699 5.7017 1198SSSSSSSRS1206
9Gal d vitellogenin 212881 3.47 4.0699 5.7017 1256SSSSRSSSS1264
10Gal d 6.0101 VIT1_CHICK 3.47 4.0699 5.7017 1170SSSSRSSSS1178
11Gal d vitellogenin 212881 3.47 4.0699 5.7017 1285SSSSSSSRS1293
12Gal d vitellogenin 63887 3.47 4.0699 5.7017 1201SSSSRSSSS1209
13Gal d vitellogenin 212881 3.47 4.0699 5.7017 1203SSSSRSSSS1211
14Gal d vitellogenin 212881 3.47 4.0699 5.7017 1200SSSSSSSRS1208
15gal d 6.0101 P87498 3.47 4.0699 5.7017 1170SSSSRSSSS1178
16Gal d vitellogenin 63887 3.47 4.0699 5.7017 1254SSSSRSSSS1262
17Gal d 6.0101 VIT1_CHICK 4.27 3.6211 5.3570 1188SSSSSSSKS1196
18Gal d vitellogenin 212881 4.27 3.6211 5.3570 1248SSSSSSSKS1256
19Gal d vitellogenin 63887 4.27 3.6211 5.3570 1246SSSSSSSKS1254
20Gal d vitellogenin 212881 4.27 3.6211 5.3570 1251SSSSKSSSS1259
21Gal d vitellogenin 212881 4.27 3.6211 5.3570 1223SSSSKSSSS1231
22Gal d vitellogenin 63887 4.27 3.6211 5.3570 1249SSSSKSSSS1257
23gal d 6.0101 P87498 4.27 3.6211 5.3570 1188SSSSSSSKS1196
24Gal d vitellogenin 63887 4.27 3.6211 5.3570 1221SSSSKSSSS1229
25Gal d vitellogenin 63887 4.37 3.5690 5.3170 1225KSSSSSSRS1233
26Gal d vitellogenin 212881 4.37 3.5690 5.3170 1227KSSSSSSRS1235
27Car i 4.0101 158998780 4.48 3.5076 5.2698 491RSRSRSSRS499
28Gal d 6.0101 VIT1_CHICK 4.64 3.4169 5.2001 1216DSSSSSSKS1224
29gal d 6.0101 P87498 4.64 3.4169 5.2001 1216DSSSSSSKS1224
30Lol p 5 Q40240 4.77 3.3428 5.1432 81RTSSRSSRP89
31Asp f 4 O60024 4.78 3.3375 5.1391 54PSSSHSDSS62
32gal d 6.0101 P87498 4.81 3.3223 5.1275 1167SDSSSSSRS1175
33Gal d 6.0101 VIT1_CHICK 4.81 3.3223 5.1275 1167SDSSSSSRS1175
34Gal d vitellogenin 212881 4.90 3.2696 5.0870 1183RSSSKSSNS1191
35Gal d vitellogenin 63887 4.90 3.2696 5.0870 1181RSSSKSSNS1189
36Lol p 5 Q40240 5.00 3.2166 5.0463 225PSRPRSSRP233
37Gal d vitellogenin 212881 5.05 3.1843 5.0215 1211SSSSSSSNS1219
38Gal d vitellogenin 63887 5.05 3.1843 5.0215 1209SSSSSSSNS1217
39Gal d 6.0101 VIT1_CHICK 5.07 3.1732 5.0129 1282SSNSRSTSS1290
40gal d 6.0101 P87498 5.07 3.1732 5.0129 1282SSNSRSTSS1290
41Api m 10.0101 94471624 5.09 3.1648 5.0065 146ETSTQSSRS154
42Api m 10.0101 94471622 5.09 3.1648 5.0065 194ETSTQSSRS202
43Gal d 6.0101 VIT1_CHICK 5.15 3.1322 4.9815 1200SRSSKSNRS1208
44Gal d vitellogenin 212881 5.15 3.1322 4.9815 1216SSNSKSSSS1224
45gal d 6.0101 P87498 5.15 3.1322 4.9815 1200SRSSKSNRS1208
46Gal d vitellogenin 212881 5.15 3.1322 4.9815 1213SSSSSNSKS1221
47Gal d vitellogenin 63887 5.15 3.1322 4.9815 1214SSNSKSSSS1222
48Gal d vitellogenin 63887 5.15 3.1322 4.9815 1211SSSSSNSKS1219
49Gal d 6.0101 VIT1_CHICK 5.16 3.1260 4.9767 1273SSSSSSSRA1281
50gal d 6.0101 P87498 5.16 3.1260 4.9767 1273SSSSSSSRA1281

Histogram for best protein-peptide similarity index
Number of windows: 1698
Average PD: 10.728912
Standard deviation: 1.782376
1 0.5 1
2 1.0 0
3 1.5 0
4 2.0 1
5 2.5 2
6 3.0 0
7 3.5 2
8 4.0 0
9 4.5 1
10 5.0 2
11 5.5 5
12 6.0 6
13 6.5 15
14 7.0 13
15 7.5 23
16 8.0 30
17 8.5 63
18 9.0 93
19 9.5 129
20 10.0 129
21 10.5 206
22 11.0 213
23 11.5 166
24 12.0 168
25 12.5 202
26 13.0 99
27 13.5 71
28 14.0 19
29 14.5 20
30 15.0 10
31 15.5 5
32 16.0 2

Histogram for all protein-peptide similarity indices
Number of windows: 400198
Average PD: 16.704569
Standard deviation: 2.320301
1 0.5 1
2 1.0 0
3 1.5 0
4 2.0 1
5 2.5 2
6 3.0 0
7 3.5 12
8 4.0 0
9 4.5 11
10 5.0 9
11 5.5 93
12 6.0 18
13 6.5 49
14 7.0 82
15 7.5 142
16 8.0 144
17 8.5 172
18 9.0 333
19 9.5 545
20 10.0 695
21 10.5 1073
22 11.0 1639
23 11.5 2427
24 12.0 3590
25 12.5 5652
26 13.0 7888
27 13.5 10329
28 14.0 13305
29 14.5 17843
30 15.0 21980
31 15.5 26264
32 16.0 29866
33 16.5 33748
34 17.0 34601
35 17.5 35341
36 18.0 33818
37 18.5 30326
38 19.0 25601
39 19.5 20778
40 20.0 14940
41 20.5 10842
42 21.0 7165
43 21.5 3831
44 22.0 2298
45 22.5 1444
46 23.0 750
47 23.5 329
48 24.0 152
49 24.5 42
Query sequence: PSSSRSSRS

SDAP Home Page | Search SDAP | SDAP Manual | SDAP FAQ | Contact  
UTMB | Search | Directories | UTMB Map | News | Employment | Sitemap 
This site published by Ovidiu Ivanciuc
Copyright   2001-2021  The University of Texas Medical Branch. Please review our privacy policy and Internet guidelines.