The University of Texas Medical Branch
Department of Biochemistry and Molecular Biology Sealy Center for Structural Biology Computational Biology


SDAP Home Page
SDAP Overview

Use SDAP
SDAP All
SDAP Food

SDAP Tools
FAO/WHO Allergenicity Test
FASTA Search in SDAP
Peptide Match
Peptide Similarity
Peptide-Protein PD Index
Aller_ML, Allergen Markup Language
List SDAP

About SDAP
General Information
Manual
FAQ
Publications
Who Are We
Advisory Board

Allergy Links

Our Software Tools
MPACK
FANTOM
GETAREA
NOAH/DIAMOD
MASIA
PCPMer
InterProSurf
EpiSearch

Allergen Databases
WHO/IUIS Allergen Nomenclature database
FARRP Allergen Protein Database (University of Nebraska)
Allergen Database for Food Safety (ADFS)
COMPARE database
ALLFAM (Medical University of Vienna)
Allermatch (Wageninen University)

Protein Databases
PDB
MMDB - Entrez
SWISS-PROT
NCBI - Entrez
PIR

Protein Classification
CATH
CE
FSSP
iProClass
ProtoMap
SCOP
TOPS
VAST

Bioinformatics Servers
@TOME
BLAST @ NCBI
BLAST @ PIR
FASTA @ PIR
Peptide Match @ PIR
ClustalW @ BCM
ClustalW @ EMBL - EBI
ClustalW @ PIR

Bioinformatics Tools
Cn3D
MolMol

Bioinformatics Links
Bioinformatics Links Directory

SDAP - All Allergens
Go to: SDAP All allergens       Go to: SDAP Food allergens
Send a comment to Ovidiu Ivanciuc      Submit new allergen information to SDAP
Last Updated: Nov 1, 2021  
Alphabetical listing of allergens: A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
Access to SDAP is available free of charge for Academic and non-profit use.
Licenses for commercial use can be obtained by contacting W. Braun (webraun@utmb.edu).
Secure access to SDAP is available from https://fermi.utmb.edu/SDAP

Search Results: Peptide Similarity

Query peptide: RGEMGEEDM

NoAllergenLink to NCBI/
PIR/SwissProt
PD Sequence
Similarity
Index
z(PD,min)z(PD,all)Start
Residue
Matching regionEnd
Residue
1Fag e 8kD 17907758 0.00 7.1175 7.4847 94RGEMGEEDM102
2Car i 4.0101 158998780 6.18 3.3604 5.0388 220RGEHGEQQR228
3Gly m conglycinin 18536 6.97 2.8833 4.7283 497RAELSEQDI505
4Gly m conglycinin 169929 6.97 2.8833 4.7283 531RAELSEQDI539
5Gly m 5.0201 Q9FZP9 6.97 2.8833 4.7283 451RAELSEQDI459
6Gly m 5.0101 O22120 6.97 2.8833 4.7283 435RAELSEQDI443
7Gly m conglycinin 169927 6.97 2.8833 4.7283 110RAELSEQDI118
8Vig r 2.0101 Q198W3 7.09 2.8105 4.6808 343RAELSEDDV351
9Gly m conglycinin 256427 7.09 2.8105 4.6808 331RAELSEDDV339
10Vig r 2.0201 B1NPN8 7.09 2.8105 4.6808 350RAELSEDDV358
11Gos h 3 P09802 7.09 2.8071 4.6786 210RGEESEEEE218
12Gos h 4 P09800 7.24 2.7181 4.6207 65RSEAGETEF73
13Dol m 5.02 552080 7.33 2.6611 4.5836 154KGTMGDNNF162
14Dol m 5.02 P10737 7.33 2.6611 4.5836 154KGTMGDNNF162
15Lat c 6.0201 XP_018553992 7.37 2.6416 4.5709 1083TGEAGERGM1091
16Gos h 3 P09802 7.47 2.5766 4.5286 207RSERGEESE215
17Gal d 5 63748 7.54 2.5340 4.5008 564KPQMTEEQI572
18Pis s 1.0101 CAF25232 7.55 2.5288 4.4975 188RQEINEENV196
19Pis s 1.0102 CAF25233 7.55 2.5288 4.4975 188RQEINEENV196
20Tyr p 28.0101 AOD75395 7.65 2.4716 4.4603 509KGRLSKEDI517
21Cav p 4.0101 Q6WDN9_CAVPO 7.68 2.4534 4.4484 560KPKASEEQM568
22Cor a 9 18479082 7.88 2.3321 4.3694 225HGEQGEQEQ233
23Hom s 5 1346344 7.88 2.3270 4.3661 415RGEMALKDA423
24Cor a 14.0101 226437844 7.94 2.2904 4.3423 111QGEMRGEEM119
25Gly d 2.0201 7160811 7.95 2.2855 4.3391 10KGEVTELDI18
26Lat c 6.0101 XP_018521723 8.01 2.2517 4.3171 1081RGEAGEAGE1089
27Gly m 7.0101 C6K8D1_SOYBN 8.07 2.2135 4.2922 178RGRVGAENE186
28Lep s 1 20387027 8.10 2.1968 4.2813 133RSQQDEERM141
29Aed a 10.0201 Q17H80_AEDAE 8.10 2.1968 4.2813 133RSQQDEERM141
30Sal s 6.0101 XP_014059932 8.17 2.1540 4.2535 1084AGEAGERGM1092
31Sal s 6.0102 XP_014048044 8.17 2.1540 4.2535 1084AGEAGERGM1092
32Gos h 1 P09801.1 8.23 2.1199 4.2313 66KSQYGEKDQ74
33Asc s 1.0101 2970628 8.24 2.1092 4.2243 66KGIIGEEKV74
34Der p 28.0101 QAT18639 8.26 2.1018 4.2195 563KSKLSEEDR571
35Der f 28.0201 AIO08848 8.26 2.1018 4.2195 563KSKLSEEDR571
36Asc l 3.0101 224016002 8.27 2.0901 4.2119 182RAEAGENKI190
37Xip g 1.0101 222352959 8.33 2.0587 4.1915 95DGKIGAEEF103
38Tyr p 28.0101 AOD75395 8.33 2.0579 4.1909 561KSKISEEDR569
39Gly m conglycinin 18536 8.33 2.0559 4.1896 132RGEKGSEEE140
40Gly m 5.0101 O22120 8.33 2.0559 4.1896 70RGEKGSEEE78
41Pon l 4.0101 P05946 8.35 2.0459 4.1831 42RGEFNEAAY50
42Chi k 10 7321108 8.41 2.0066 4.1575 182RAEAGEAKI190
43Der f mag29 666007 8.45 1.9864 4.1444 48KSKVSEEDR56
44Len c 1.0101 29539109 8.46 1.9783 4.1391 188RQEITNEDV196
45Amb a 1 P27759 8.48 1.9624 4.1288 327HGEAAAESM335
46Cha f 1 Q9N2R3 8.50 1.9535 4.1230 91RIQLPEEDL99
47Ani s 3 Q9NAS5 8.51 1.9469 4.1187 182RAETGENKI190
48Lit v 1.0101 170791251 8.57 1.9110 4.0953 35RAEKSEEEV43
49Mac r 1.0101 D3XNR9_MACRS 8.57 1.9110 4.0953 35RAEKSEEEV43
50Der f 10.0101 1359436 8.57 1.9110 4.0953 50RAEKSEEEV58

Histogram for best protein-peptide similarity index
Number of windows: 1698
Average PD: 11.714341
Standard deviation: 1.645848
1 0.5 1
2 1.0 0
3 1.5 0
4 2.0 0
5 2.5 0
6 3.0 0
7 3.5 0
8 4.0 0
9 4.5 0
10 5.0 0
11 5.5 0
12 6.0 0
13 6.5 1
14 7.0 5
15 7.5 8
16 8.0 9
17 8.5 18
18 9.0 49
19 9.5 70
20 10.0 64
21 10.5 118
22 11.0 144
23 11.5 224
24 12.0 263
25 12.5 245
26 13.0 184
27 13.5 119
28 14.0 53
29 14.5 46
30 15.0 26
31 15.5 24
32 16.0 13
33 16.5 6
34 17.0 3
35 17.5 0
36 18.0 1
37 18.5 0
38 19.0 2
39 19.5 0
40 20.0 0
41 20.5 0
42 21.0 0
43 21.5 1

Histogram for all protein-peptide similarity indices
Number of windows: 400198
Average PD: 18.923055
Standard deviation: 2.528243
1 0.5 1
2 1.0 0
3 1.5 0
4 2.0 0
5 2.5 0
6 3.0 0
7 3.5 0
8 4.0 0
9 4.5 0
10 5.0 0
11 5.5 0
12 6.0 0
13 6.5 1
14 7.0 5
15 7.5 9
16 8.0 9
17 8.5 21
18 9.0 68
19 9.5 103
20 10.0 159
21 10.5 235
22 11.0 342
23 11.5 584
24 12.0 972
25 12.5 1320
26 13.0 2068
27 13.5 2952
28 14.0 4146
29 14.5 5694
30 15.0 7666
31 15.5 10451
32 16.0 13778
33 16.5 16711
34 17.0 20448
35 17.5 22851
36 18.0 26723
37 18.5 29897
38 19.0 30561
39 19.5 32026
40 20.0 30539
41 20.5 29361
42 21.0 26512
43 21.5 22312
44 22.0 18970
45 22.5 14344
46 23.0 10370
47 23.5 7396
48 24.0 4629
49 24.5 2996
50 25.0 1551
51 25.5 909
52 26.0 350
53 26.5 108
54 27.0 34
Query sequence: RGEMGEEDM

SDAP Home Page | Search SDAP | SDAP Manual | SDAP FAQ | Contact  
UTMB | Search | Directories | UTMB Map | News | Employment | Sitemap 
This site published by Ovidiu Ivanciuc
Copyright   2001-2021  The University of Texas Medical Branch. Please review our privacy policy and Internet guidelines.