The University of Texas Medical Branch
Department of Biochemistry and Molecular Biology Sealy Center for Structural Biology Computational Biology


SDAP Home Page
SDAP Overview

Use SDAP
SDAP All
SDAP Food

SDAP Tools
FAO/WHO Allergenicity Test
FASTA Search in SDAP
Peptide Match
Peptide Similarity
Peptide-Protein PD Index
Aller_ML, Allergen Markup Language
List SDAP

About SDAP
General Information
Manual
FAQ
Publications
Who Are We
Advisory Board

Allergy Links

Our Software Tools
MPACK
FANTOM
GETAREA
NOAH/DIAMOD
MASIA
PCPMer
InterProSurf
EpiSearch

Allergen Databases
WHO/IUIS Allergen Nomenclature database
FARRP Allergen Protein Database (University of Nebraska)
Allergen Database for Food Safety (ADFS)
COMPARE database
ALLFAM (Medical University of Vienna)
Allermatch (Wageninen University)

Protein Databases
PDB
MMDB - Entrez
SWISS-PROT
NCBI - Entrez
PIR

Protein Classification
CATH
CE
FSSP
iProClass
ProtoMap
SCOP
TOPS
VAST

Bioinformatics Servers
@TOME
BLAST @ NCBI
BLAST @ PIR
FASTA @ PIR
Peptide Match @ PIR
ClustalW @ BCM
ClustalW @ EMBL - EBI
ClustalW @ PIR

Bioinformatics Tools
Cn3D
MolMol

Bioinformatics Links
Bioinformatics Links Directory

SDAP - All Allergens
Go to: SDAP All allergens       Go to: SDAP Food allergens
Send a comment to Ovidiu Ivanciuc      Submit new allergen information to SDAP
Last Updated: Nov 1, 2021  
Alphabetical listing of allergens: A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
Access to SDAP is available free of charge for Academic and non-profit use.
Licenses for commercial use can be obtained by contacting W. Braun (webraun@utmb.edu).
Secure access to SDAP is available from https://fermi.utmb.edu/SDAP

Search Results: Peptide Similarity

Query peptide: RGGNGYITT

NoAllergenLink to NCBI/
PIR/SwissProt
PD Sequence
Similarity
Index
z(PD,min)z(PD,all)Start
Residue
Matching regionEnd
Residue
1Hom a 6.0101 P29291 0.00 6.0480 7.2329 97RGGNGYITT105
2Per a 6.0101 Q1M0Y3 3.57 4.0136 5.8104 97KEGNGYITT105
3Bla g 6.0101 82704032 3.57 4.0136 5.8104 97KEGNGYITT105
4Bla g 6.0201 82704034 3.57 4.0136 5.8104 97KEGNGYITT105
5Bla g 6.0301 82704036 5.29 3.0302 5.1227 101KEGNGYIPT109
6Tyr p 24.0101 219815476 5.29 3.0302 5.1227 99KEGNGYIPT107
7Tyr p 34.0101 TNNC_TYRPU 5.29 3.0302 5.1227 99KEGNGYIPT107
8Der f 39.0101 QBF67841 5.29 3.0302 5.1227 99KEGNGYIPT107
9Der p 39.0101 QXY82447 5.29 3.0302 5.1227 99KEGNGYIPT107
10Pan h 9.0101 XP_026775867 5.75 2.7661 4.9380 515RPGSGYTNT523
11Pen m 6.0101 317383200 6.27 2.4704 4.7312 97KDCQGYITT105
12Mala s 12.0101 78038796 6.37 2.4156 4.6929 197HGSNGPIGT205
13Pin k 2.0101 VCL_PINKO 6.45 2.3659 4.6582 131TGGRGYIAY139
14Bet v 3 P43187 6.67 2.2446 4.5734 144EDGDGYISA152
15Act d 7.0101 P85076 6.68 2.2341 4.5661 14KDGSGNFTT22
16Hel a 6.0101 A0A251RNJ1_HELAN 6.72 2.2150 4.5527 80KGGDVYVVT88
17Sola l 2.0201 Q8RVW4_SOLLC 6.78 2.1798 4.5280 581QGGRTVITS589
18Lyc e 2.0102 18542115 6.78 2.1798 4.5280 581QGGRTVITS589
19Lyc e 2.0102 546937 6.78 2.1798 4.5280 581QGGRTVITS589
20Art v 5.0101 62530264 6.80 2.1648 4.5176 53TDGDGYISY61
21Bra n 2 Q39406 6.80 2.1648 4.5176 54TDGDGYISY62
22Bra n 2 1255538 6.80 2.1648 4.5176 53TDGDGYISY61
23Cuc m 1 807698 7.05 2.0225 4.4181 307NGGPNFFTT315
24Lat c 6.0301 XP_018522130 7.06 2.0201 4.4164 1074RGPPGYVGP1082
25Pen c 30.0101 82754305 7.11 1.9899 4.3953 457TTGKGFFTT465
26Mala s 1 Q01940 7.46 1.7924 4.2572 168RDGNSYVAF176
27Dau c 5.0101 H2DF86 7.48 1.7814 4.2495 8VGGTGYIGK16
28Asp f 5 3776613 7.50 1.7695 4.2412 291RGNNGIAQS299
29Tri a glutenin 32968199 7.50 1.7655 4.2384 791QGQQGYYSS799
30Tri a glutenin 736319 7.50 1.7655 4.2384 790QGQQGYYSS798
31Tri a 26.0101 P10388 7.50 1.7655 4.2384 791QGQQGYYSS799
32Tri a glutenin 22090 7.50 1.7655 4.2384 490QGQQGYYSS498
33Jun a 2 9955725 7.52 1.7591 4.2339 414KNANGYYTN422
34Cup s 2.0101 PGLR_CUPSE 7.52 1.7591 4.2339 149KNANGYYTN157
35Pen c 32.0101 121584258 7.60 1.7138 4.2022 16TGGSGGTTT24
36Tri a glutenin 21751 7.61 1.7044 4.1956 184KGQQGYYPT192
37Cup a 4.0101 145581052 7.64 1.6866 4.1832 153KNGDGLISV161
38Jun o 4 O64943 7.64 1.6866 4.1832 141KNGDGLISV149
39Bet v 6.0101 4731376 7.67 1.6698 4.1715 10IGGTGYIGK18
40Cor a 6.0101 A0A0U1VZC8_CORAV 7.67 1.6698 4.1715 10IGGTGYIGK18
41Pyr c 5 3243234 7.67 1.6698 4.1715 10IGGTGYIGK18
42Bet v 6.0102 10764491 7.67 1.6698 4.1715 10IGGTGYIGK18
43Ole e 12.0101 ALL12_OLEEU 7.67 1.6698 4.1715 10IGGTGYIGK18
44Tri a glutenin 170743 7.68 1.6644 4.1677 154QGQSGYYPT162
45Tri a glutenin 170743 7.68 1.6644 4.1677 310QGQSGYYPT318
46Tri a glutenin 32968199 7.68 1.6644 4.1677 299QGQSGYYPT307
47Tri a glutenin 736319 7.68 1.6644 4.1677 304QGQSGYYPT312
48Tri a glutenin 21743 7.68 1.6644 4.1677 316QGQSGYYPT324
49Tri a 26.0101 P10388 7.68 1.6644 4.1677 299QGQSGYYPT307
50Per a 3.0101 Q25641 7.73 1.6355 4.1474 299RPSNMYVTN307

Histogram for best protein-peptide similarity index
Number of windows: 1698
Average PD: 10.598414
Standard deviation: 1.752374
1 0.5 1
2 1.0 0
3 1.5 0
4 2.0 0
5 2.5 0
6 3.0 0
7 3.5 0
8 4.0 3
9 4.5 0
10 5.0 0
11 5.5 5
12 6.0 1
13 6.5 3
14 7.0 9
15 7.5 6
16 8.0 47
17 8.5 178
18 9.0 99
19 9.5 91
20 10.0 176
21 10.5 199
22 11.0 196
23 11.5 146
24 12.0 190
25 12.5 153
26 13.0 67
27 13.5 54
28 14.0 34
29 14.5 14
30 15.0 8
31 15.5 10
32 16.0 3
33 16.5 2
34 17.0 1
35 17.5 0
36 18.0 0
37 18.5 1
38 19.0 0
39 19.5 0

Histogram for all protein-peptide similarity indices
Number of windows: 400198
Average PD: 18.126345
Standard deviation: 2.506093
1 0.5 1
2 1.0 0
3 1.5 0
4 2.0 0
5 2.5 0
6 3.0 0
7 3.5 0
8 4.0 3
9 4.5 0
10 5.0 0
11 5.5 5
12 6.0 1
13 6.5 3
14 7.0 9
15 7.5 6
16 8.0 102
17 8.5 216
18 9.0 139
19 9.5 141
20 10.0 332
21 10.5 448
22 11.0 790
23 11.5 1210
24 12.0 1728
25 12.5 2669
26 13.0 3776
27 13.5 5123
28 14.0 7399
29 14.5 8941
30 15.0 11838
31 15.5 14500
32 16.0 18005
33 16.5 21354
34 17.0 25371
35 17.5 28207
36 18.0 30285
37 18.5 31405
38 19.0 31753
39 19.5 31080
40 20.0 28552
41 20.5 24958
42 21.0 21168
43 21.5 16801
44 22.0 12463
45 22.5 8534
46 23.0 5329
47 23.5 3194
48 24.0 1539
49 24.5 583
50 25.0 206
51 25.5 28
Query sequence: RGGNGYITT

SDAP Home Page | Search SDAP | SDAP Manual | SDAP FAQ | Contact  
UTMB | Search | Directories | UTMB Map | News | Employment | Sitemap 
This site published by Ovidiu Ivanciuc
Copyright   2001-2021  The University of Texas Medical Branch. Please review our privacy policy and Internet guidelines.