The University of Texas Medical Branch
Department of Biochemistry and Molecular Biology Sealy Center for Structural Biology Computational Biology


SDAP Home Page
SDAP Overview

Use SDAP
SDAP All
SDAP Food

SDAP Tools
FAO/WHO Allergenicity Test
FASTA Search in SDAP
Peptide Match
Peptide Similarity
Peptide-Protein PD Index
Aller_ML, Allergen Markup Language
List SDAP

About SDAP
General Information
Manual
FAQ
Publications
Who Are We
Advisory Board

Allergy Links

Our Software Tools
MPACK
FANTOM
GETAREA
NOAH/DIAMOD
MASIA
PCPMer
InterProSurf
EpiSearch

Allergen Databases
WHO/IUIS Allergen Nomenclature database
FARRP Allergen Protein Database (University of Nebraska)
Allergen Database for Food Safety (ADFS)
COMPARE database
ALLFAM (Medical University of Vienna)
Allermatch (Wageninen University)

Protein Databases
PDB
MMDB - Entrez
SWISS-PROT
NCBI - Entrez
PIR

Protein Classification
CATH
CE
FSSP
iProClass
ProtoMap
SCOP
TOPS
VAST

Bioinformatics Servers
@TOME
BLAST @ NCBI
BLAST @ PIR
FASTA @ PIR
Peptide Match @ PIR
ClustalW @ BCM
ClustalW @ EMBL - EBI
ClustalW @ PIR

Bioinformatics Tools
Cn3D
MolMol

Bioinformatics Links
Bioinformatics Links Directory

SDAP - All Allergens
Go to: SDAP All allergens       Go to: SDAP Food allergens
Send a comment to Ovidiu Ivanciuc      Submit new allergen information to SDAP
Last Updated: Nov 1, 2021  
Alphabetical listing of allergens: A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
Access to SDAP is available free of charge for Academic and non-profit use.
Licenses for commercial use can be obtained by contacting W. Braun (webraun@utmb.edu).
Secure access to SDAP is available from https://fermi.utmb.edu/SDAP

Search Results: Peptide Similarity

Query peptide: RGKKGTGGI

NoAllergenLink to NCBI/
PIR/SwissProt
PD Sequence
Similarity
Index
z(PD,min)z(PD,all)Start
Residue
Matching regionEnd
Residue
1Hor v 12.0101 P52184 0.00 4.1724 7.1234 84RGKKGTGGI92
2Zea m 12.0104 O22655 0.00 4.1724 7.1234 84RGKKGTGGI92
3Ana c 1 14161637 0.00 4.1724 7.1234 84RGKKGTGGI92
4Tri a 12.0104 207366247 0.00 4.1724 7.1234 84RGKKGTGGI92
5Zea m 12.0105 Q9FR39 0.00 4.1724 7.1234 84RGKKGTGGI92
6Tri a 12.0101 P49232 0.00 4.1724 7.1234 84RGKKGTGGI92
7Tri a 12.0102 P49233 0.00 4.1724 7.1234 84RGKKGTGGI92
8Tri a 12.0103 P49234 0.00 4.1724 7.1234 84RGKKGTGGI92
9Bet v 2 P25816 0.73 3.8916 6.8510 86RGKKGSGGI94
10Mer a 1 O49894 0.73 3.8916 6.8510 86RGKKGSGGI94
11Pru p 4.0101 27528310 0.73 3.8916 6.8510 84RGKKGSGGI92
12Zea m 12.0103 P35083 0.73 3.8916 6.8510 84RGKKGSGGI92
13Lig v 2.0101 QRN65366 0.73 3.8916 6.8510 87RGKKGSGGI95
14Ole e 2 O24171 0.73 3.8916 6.8510 87RGKKGSGGI95
15Pru du 4.0101 24473793 0.73 3.8916 6.8510 84RGKKGSGGI92
16Zea m 12.0102 P35082 0.73 3.8916 6.8510 84RGKKGSGGI92
17Zea m 12.0101 P35081 0.73 3.8916 6.8510 84RGKKGSGGI92
18Hev b 8.0203 Q9M7M8 0.73 3.8916 6.8510 84RGKKGSGGI92
19Mal d 4 Q9XF42 0.73 3.8916 6.8510 84RGKKGSGGI92
20Hev b 8.0204 Q9LEI8 0.73 3.8916 6.8510 84RGKKGSGGI92
21Ole e 2 O24169 0.73 3.8916 6.8510 87RGKKGSGGI95
22Cit s 2.0101 P84177 0.73 3.8916 6.8510 84RGKKGSGGI92
23Hev b 8.0201 Q9M7N0 0.73 3.8916 6.8510 84RGKKGSGGI92
24Pru du 4.0102 24473797 0.73 3.8916 6.8510 84RGKKGSGGI92
25Pru av 4 Q9XF39 0.73 3.8916 6.8510 84RGKKGSGGI92
26Ole e 2 O24170 0.73 3.8916 6.8510 87RGKKGSGGI95
27Hev b 8.0202 Q9M7M9 0.73 3.8916 6.8510 84RGKKGSGGI92
28Ory s 12.0101 Q9FUD1 0.73 3.8916 6.8510 84RGKKGSGGI92
29Mal d 4 Q9XF40 1.33 3.6570 6.6234 84RGKKGSGGV92
30Pho d 2.0101 Q8L5D8 1.33 3.6570 6.6234 84RGKKGSGGV92
31Mus a 1.0101 14161634 1.33 3.6570 6.6234 84RGKKGSGGV92
32Que ac 2.0101 QVU02258 1.33 3.6570 6.6234 86RGKKGSGGV94
33Dau c 4 18652049 1.33 3.6570 6.6234 87RGKKGSGGV95
34Cro s 1.0101 Q5EF31 1.33 3.6570 6.6234 84RGKKGSGGV92
35Cyn d 12 O04725 1.33 3.6570 6.6234 84RGKKGSGGV92
36Api g 4 Q9XF37 1.33 3.6570 6.6234 87RGKKGSGGV95
37Pop n 2.0101 QID21357 1.33 3.6570 6.6234 84RGKKGSGGV92
38Pyr c 4 Q9XF38 1.33 3.6570 6.6234 84RGKKGSGGV92
39Can s 2.0101 XP030492464 1.33 3.6570 6.6234 86RGKKGSGGV94
40Phl p 12.0101 453976 1.47 3.6056 6.5735 84RGKKGAGGI92
41Art v 4.0201 25955970 1.47 3.6056 6.5735 86RGKKGAGGI94
42Phl p 12.0101 P35079 1.47 3.6056 6.5735 84RGKKGAGGI92
43Phl p 12.0103 O24282 1.47 3.6056 6.5735 84RGKKGAGGI92
44Jug r 7.0101 A0A2I4DNN6_JUGRE 1.47 3.6056 6.5735 84RGKKGAGGI92
45Art v 4.0101 25955968 1.47 3.6056 6.5735 86RGKKGAGGI94
46Hel a 2 O81982 1.47 3.6056 6.5735 86RGKKGAGGI94
47Phl p 12.0102 O24650 1.47 3.6056 6.5735 84RGKKGAGGI92
48Lyc e 1 17224229 1.47 3.6056 6.5735 84RGKKGAGGI92
49Ama r 2.0101 227937304 1.47 3.6056 6.5735 86RGKKGAGGI94
50Aca f 2 A0A0A0RCW1_VACFA 1.72 3.5066 6.4775 86RGKKGPGGI94

Histogram for best protein-peptide similarity index
Number of windows: 1698
Average PD: 10.800882
Standard deviation: 2.588674
1 0.5 8
2 1.0 20
3 1.5 21
4 2.0 9
5 2.5 14
6 3.0 1
7 3.5 0
8 4.0 0
9 4.5 0
10 5.0 1
11 5.5 1
12 6.0 3
13 6.5 2
14 7.0 9
15 7.5 6
16 8.0 15
17 8.5 12
18 9.0 40
19 9.5 89
20 10.0 226
21 10.5 157
22 11.0 147
23 11.5 211
24 12.0 214
25 12.5 149
26 13.0 135
27 13.5 76
28 14.0 67
29 14.5 22
30 15.0 17
31 15.5 11
32 16.0 7
33 16.5 3
34 17.0 2
35 17.5 0
36 18.0 0
37 18.5 1
38 19.0 0
39 19.5 0
40 20.0 0
41 20.5 1

Histogram for all protein-peptide similarity indices
Number of windows: 400198
Average PD: 19.005669
Standard deviation: 2.668063
1 0.5 8
2 1.0 20
3 1.5 21
4 2.0 9
5 2.5 14
6 3.0 1
7 3.5 0
8 4.0 0
9 4.5 0
10 5.0 1
11 5.5 1
12 6.0 3
13 6.5 2
14 7.0 19
15 7.5 22
16 8.0 52
17 8.5 74
18 9.0 93
19 9.5 178
20 10.0 372
21 10.5 421
22 11.0 577
23 11.5 971
24 12.0 1228
25 12.5 1566
26 13.0 2426
27 13.5 3099
28 14.0 4578
29 14.5 5841
30 15.0 8109
31 15.5 10363
32 16.0 12563
33 16.5 15317
34 17.0 18355
35 17.5 21205
36 18.0 25006
37 18.5 26966
38 19.0 29935
39 19.5 30574
40 20.0 30420
41 20.5 28910
42 21.0 27008
43 21.5 24096
44 22.0 19939
45 22.5 16099
46 23.0 11996
47 23.5 8871
48 24.0 5926
49 24.5 3328
50 25.0 1940
51 25.5 1046
52 26.0 474
53 26.5 134
Query sequence: RGKKGTGGI

SDAP Home Page | Search SDAP | SDAP Manual | SDAP FAQ | Contact  
UTMB | Search | Directories | UTMB Map | News | Employment | Sitemap 
This site published by Ovidiu Ivanciuc
Copyright   2001-2021  The University of Texas Medical Branch. Please review our privacy policy and Internet guidelines.