The University of Texas Medical Branch
Department of Biochemistry and Molecular Biology Sealy Center for Structural Biology Computational Biology


SDAP Home Page
SDAP Overview

Use SDAP
SDAP All
SDAP Food

SDAP Tools
FAO/WHO Allergenicity Test
FASTA Search in SDAP
Peptide Match
Peptide Similarity
Peptide-Protein PD Index
Aller_ML, Allergen Markup Language
List SDAP

About SDAP
General Information
Manual
FAQ
Publications
Who Are We
Advisory Board

Allergy Links

Our Software Tools
MPACK
FANTOM
GETAREA
NOAH/DIAMOD
MASIA
PCPMer
InterProSurf
EpiSearch

Allergen Databases
WHO/IUIS Allergen Nomenclature database
FARRP Allergen Protein Database (University of Nebraska)
Allergen Database for Food Safety (ADFS)
COMPARE database
ALLFAM (Medical University of Vienna)
Allermatch (Wageninen University)

Protein Databases
PDB
MMDB - Entrez
SWISS-PROT
NCBI - Entrez
PIR

Protein Classification
CATH
CE
FSSP
iProClass
ProtoMap
SCOP
TOPS
VAST

Bioinformatics Servers
@TOME
BLAST @ NCBI
BLAST @ PIR
FASTA @ PIR
Peptide Match @ PIR
ClustalW @ BCM
ClustalW @ EMBL - EBI
ClustalW @ PIR

Bioinformatics Tools
Cn3D
MolMol

Bioinformatics Links
Bioinformatics Links Directory

SDAP - All Allergens
Go to: SDAP All allergens       Go to: SDAP Food allergens
Send a comment to Ovidiu Ivanciuc      Submit new allergen information to SDAP
Last Updated: Nov 1, 2021  
Alphabetical listing of allergens: A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
Access to SDAP is available free of charge for Academic and non-profit use.
Licenses for commercial use can be obtained by contacting W. Braun (webraun@utmb.edu).
Secure access to SDAP is available from https://fermi.utmb.edu/SDAP

Search Results: Peptide Similarity

Query peptide: RGQQGQQSN

NoAllergenLink to NCBI/
PIR/SwissProt
PD Sequence
Similarity
Index
z(PD,min)z(PD,all)Start
Residue
Matching regionEnd
Residue
1Pis v 2.0101 110349082 0.00 6.0051 6.8623 222RGQQGQQSN230
2Tri a glutenin 21743 1.72 5.0085 6.1531 250RGQQGQQSG258
3Tri a glutenin 170743 1.72 5.0085 6.1531 244RGQQGQQSG252
4Tri a glutenin 170743 2.68 4.4501 5.7556 205QGQQGQQSG213
5Tri a glutenin 21743 2.68 4.4501 5.7556 211QGQQGQQSG219
6Sin a 2.0101 Q2TLW0 3.08 4.2179 5.5904 137QGQQGQQGQ145
7Sin a 2.0101 Q2TLW0 3.08 4.2179 5.5904 140QGQQGQQGQ148
8Sin a 2.0101 Q2TLW0 3.08 4.2179 5.5904 143QGQQGQQGQ151
9Sin a 2.0101 Q2TLW0 3.08 4.2179 5.5904 146QGQQGQQGQ154
10Sin a 2.0101 Q2TLW0 3.08 4.2179 5.5904 149QGQQGQQGQ157
11Sin a 2.0101 Q2TLW0 3.08 4.2179 5.5904 152QGQQGQQGQ160
12Sin a 2.0101 Q2TLW0 3.08 4.2179 5.5904 155QGQQGQQGQ163
13Sin a 2.0101 Q2TLW0 3.08 4.2179 5.5904 158QGQQGQQGQ166
14Sin a 2.0101 Q2TLW0 3.08 4.2179 5.5904 131QGQQGQQGQ139
15Sin a 2.0101 Q2TLW0 3.08 4.2179 5.5904 161QGQQGQQGQ169
16Sin a 2.0101 Q2TLW0 3.08 4.2179 5.5904 164QGQQGQQGQ172
17Sin a 2.0101 Q2TLW0 3.08 4.2179 5.5904 134QGQQGQQGQ142
18Tri a glutenin 170743 3.64 3.8916 5.3582 346QGRQGQQSG354
19Tri a glutenin 21743 3.64 3.8916 5.3582 352QGRQGQQSG360
20Tri a glutenin 170743 3.90 3.7410 5.2510 421QGQQGQQQR429
21Sin a 2.0101 Q2TLW0 4.04 3.6603 5.1935 124QGQQGQQQG132
22Tri a glutenin 170743 4.11 3.6201 5.1649 412QGQQGQQPE420
23Tri a glutenin 170743 4.11 3.6201 5.1649 235QGQQGQQPE243
24Tri a glutenin 21743 4.11 3.6201 5.1649 241QGQQGQQPE249
25Tri a glutenin 21743 4.11 3.6201 5.1649 418QGQQGQQPE426
26Tri a 26.0101 P10388 4.20 3.5676 5.1275 482QGQQGQQPG490
27Tri a glutenin 736319 4.20 3.5676 5.1275 250QGQQGQQPG258
28Tri a glutenin 32968199 4.20 3.5676 5.1275 614QGQQGQQPG622
29Tri a glutenin 32968199 4.20 3.5676 5.1275 632QGQQGQQPG640
30Tri a glutenin 736319 4.20 3.5676 5.1275 346QGQQGQQPG354
31Tri a 26.0101 P10388 4.20 3.5676 5.1275 221QGQQGQQPG229
32Tri a glutenin 32968199 4.20 3.5676 5.1275 245QGQQGQQPG253
33Tri a glutenin 21743 4.20 3.5676 5.1275 589QGQQGQQPG597
34Tri a glutenin 21743 4.20 3.5676 5.1275 607QGQQGQQPG615
35Tri a glutenin 170743 4.20 3.5676 5.1275 574QGQQGQQPG582
36Tri a 26.0101 P10388 4.20 3.5676 5.1275 332QGQQGQQPG340
37Tri a glutenin 32968199 4.20 3.5676 5.1275 190QGQQGQQPG198
38Tri a glutenin 32968199 4.20 3.5676 5.1275 596QGQQGQQPG604
39Tri a glutenin 736319 4.20 3.5676 5.1275 337QGQQGQQPG345
40Tri a 26.0101 P10388 4.20 3.5676 5.1275 245QGQQGQQPG253
41Tri a 26.0101 P10388 4.20 3.5676 5.1275 596QGQQGQQPG604
42Tri a 26.0101 P10388 4.20 3.5676 5.1275 473QGQQGQQPG481
43Tri a glutenin 170743 4.20 3.5676 5.1275 583QGQQGQQPG591
44Tri a 26.0101 P10388 4.20 3.5676 5.1275 190QGQQGQQPG198
45Tri a glutenin 736319 4.20 3.5676 5.1275 226QGQQGQQPG234
46Tri a glutenin 21743 4.20 3.5676 5.1275 427QGQQGQQPG435
47Tri a glutenin 736319 4.20 3.5676 5.1275 616QGQQGQQPG624
48Tri a glutenin 32968199 4.20 3.5676 5.1275 341QGQQGQQPG349
49Tri a glutenin 32968199 4.20 3.5676 5.1275 473QGQQGQQPG481
50Tri a glutenin 170743 4.20 3.5676 5.1275 439QGQQGQQPG447

Histogram for best protein-peptide similarity index
Number of windows: 1698
Average PD: 10.348788
Standard deviation: 1.723333
1 0.5 1
2 1.0 0
3 1.5 0
4 2.0 2
5 2.5 0
6 3.0 0
7 3.5 1
8 4.0 0
9 4.5 6
10 5.0 1
11 5.5 6
12 6.0 6
13 6.5 15
14 7.0 24
15 7.5 45
16 8.0 40
17 8.5 66
18 9.0 88
19 9.5 124
20 10.0 204
21 10.5 205
22 11.0 266
23 11.5 193
24 12.0 169
25 12.5 128
26 13.0 43
27 13.5 26
28 14.0 17
29 14.5 6
30 15.0 7
31 15.5 5
32 16.0 2
33 16.5 1
34 17.0 0
35 17.5 0
36 18.0 0
37 18.5 0
38 19.0 0
39 19.5 0
40 20.0 0
41 20.5 0
42 21.0 0
43 21.5 0
44 22.0 0

Histogram for all protein-peptide similarity indices
Number of windows: 400198
Average PD: 16.616655
Standard deviation: 2.421425
1 0.5 1
2 1.0 0
3 1.5 0
4 2.0 2
5 2.5 0
6 3.0 2
7 3.5 12
8 4.0 3
9 4.5 49
10 5.0 7
11 5.5 27
12 6.0 26
13 6.5 62
14 7.0 111
15 7.5 310
16 8.0 209
17 8.5 577
18 9.0 551
19 9.5 802
20 10.0 1044
21 10.5 1595
22 11.0 2187
23 11.5 2990
24 12.0 4303
25 12.5 6197
26 13.0 7813
27 13.5 10674
28 14.0 13848
29 14.5 18209
30 15.0 21675
31 15.5 26005
32 16.0 30244
33 16.5 33056
34 17.0 34931
35 17.5 33835
36 18.0 32627
37 18.5 29786
38 19.0 24279
39 19.5 19614
40 20.0 15388
41 20.5 10438
42 21.0 6980
43 21.5 4196
44 22.0 2601
45 22.5 1469
46 23.0 806
47 23.5 468
48 24.0 147
49 24.5 35
Query sequence: RGQQGQQSN

SDAP Home Page | Search SDAP | SDAP Manual | SDAP FAQ | Contact  
UTMB | Search | Directories | UTMB Map | News | Employment | Sitemap 
This site published by Ovidiu Ivanciuc
Copyright   2001-2021  The University of Texas Medical Branch. Please review our privacy policy and Internet guidelines.