The University of Texas Medical Branch
Department of Biochemistry and Molecular Biology Sealy Center for Structural Biology Computational Biology


SDAP Home Page
SDAP Overview

Use SDAP
SDAP All
SDAP Food

SDAP Tools
FAO/WHO Allergenicity Test
FASTA Search in SDAP
Peptide Match
Peptide Similarity
Peptide-Protein PD Index
Aller_ML, Allergen Markup Language
List SDAP

About SDAP
General Information
Manual
FAQ
Publications
Who Are We
Advisory Board

Allergy Links

Our Software Tools
MPACK
FANTOM
GETAREA
NOAH/DIAMOD
MASIA
PCPMer
InterProSurf
EpiSearch

Allergen Databases
WHO/IUIS Allergen Nomenclature database
FARRP Allergen Protein Database (University of Nebraska)
Allergen Database for Food Safety (ADFS)
COMPARE database
ALLFAM (Medical University of Vienna)
Allermatch (Wageninen University)

Protein Databases
PDB
MMDB - Entrez
SWISS-PROT
NCBI - Entrez
PIR

Protein Classification
CATH
CE
FSSP
iProClass
ProtoMap
SCOP
TOPS
VAST

Bioinformatics Servers
@TOME
BLAST @ NCBI
BLAST @ PIR
FASTA @ PIR
Peptide Match @ PIR
ClustalW @ BCM
ClustalW @ EMBL - EBI
ClustalW @ PIR

Bioinformatics Tools
Cn3D
MolMol

Bioinformatics Links
Bioinformatics Links Directory

SDAP - All Allergens
Go to: SDAP All allergens       Go to: SDAP Food allergens
Send a comment to Ovidiu Ivanciuc      Submit new allergen information to SDAP
Last Updated: Nov 1, 2021  
Alphabetical listing of allergens: A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
Access to SDAP is available free of charge for Academic and non-profit use.
Licenses for commercial use can be obtained by contacting W. Braun (webraun@utmb.edu).
Secure access to SDAP is available from https://fermi.utmb.edu/SDAP

Search Results: Peptide Similarity

Query peptide: RGREFRKAF

NoAllergenLink to NCBI/
PIR/SwissProt
PD Sequence
Similarity
Index
z(PD,min)z(PD,all)Start
Residue
Matching regionEnd
Residue
1Hor v 5.0101 1808986 0.00 7.0011 7.2715 101RGREFRKAF109
2Cop c 3 5689671 5.19 3.8122 5.2779 139RGQELRQAT147
3Clu h 1.0301 242253967 5.55 3.5901 5.1391 40SGDELKKAF48
4Seb m 1.0201 242253961 6.94 2.7374 4.6060 41SSDEVKKAF49
5Cten i 1.0101 QCY53440 6.94 2.7372 4.6059 40SGDDVKKAF48
6Ras k 1.0101 A0A1B1V0G7_RASKA 6.94 2.7372 4.6059 40SGDDVKKAF48
7Cor a 14.0101 226437844 6.97 2.7173 4.5935 115RGEEMREVM123
8Bos d 13.0101 MYL1_BOVIN 7.17 2.5949 4.5170 49QQDEFKEAF57
9Pin p 1 PINP1_PINPI 7.39 2.4597 4.4324 122RGREEEEAV130
10Pin p 1.0101 PINP1_PINPI 7.39 2.4597 4.4324 122RGREEEEAV130
11Pis v 3.0101 133711973 7.44 2.4320 4.4151 487KGEEVDKVF495
12Sco j 1 32363220 7.44 2.4305 4.4142 40STDEVKKAF48
13Dol m 1.0101 Q06478 7.45 2.4220 4.4088 50RHNEFKKSI58
14Der f 28.0201 AIO08848 7.53 2.3742 4.3790 359NGKELNKSI367
15Tyr p 28.0101 AOD75395 7.53 2.3742 4.3790 357NGKELNKSI365
16Der p 28.0101 QAT18639 7.53 2.3742 4.3790 359NGKELNKSI367
17Der f 1.0102 2428875 7.58 2.3429 4.3594 7TFEEFKKAF15
18Der f 1.0105 2428875 7.58 2.3429 4.3594 7TFEEFKKAF15
19Der f 1.0101 27530349 7.58 2.3429 4.3594 25TFEEFKKAF33
20Der f 1.0104 2428875 7.58 2.3429 4.3594 7TFEEFKKAF15
21Der f 1.0110 119633264 7.58 2.3429 4.3594 25TFEEFKKAF33
22Der f 1.0109 119633262 7.58 2.3429 4.3594 25TFEEFKKAF33
23Eur m 1.0101 3941388 7.58 2.3429 4.3594 25TFEEFKKAF33
24Der f 1 P16311 7.58 2.3429 4.3594 25TFEEFKKAF33
25Eur m 1.0101 P25780 7.58 2.3429 4.3594 25TFEEFKKAF33
26Eur m 1.0102 3941390 7.58 2.3429 4.3594 25TFEEFKKAF33
27Der f 1.0103 2428875 7.58 2.3429 4.3594 7TFEEFKKAF15
28Der f 1.0107 2428875 7.58 2.3429 4.3594 7TFEEFKKAF15
29Der f 1.0108 119633260 7.58 2.3429 4.3594 25TFEEFKKAF33
30Sar sa 1.0101 193247971 7.61 2.3260 4.3488 40SADELKKAF48
31Ber e 1 167188 7.67 2.2899 4.3263 112RGEQMRRMM120
32Ber e 1 P04403 7.67 2.2899 4.3263 112RGEQMRRMM120
33Per a 1.0103 2580504 7.68 2.2857 4.3236 62QGEEFHKIV70
34Eur m 14 6492307 7.78 2.2212 4.2833 1083FGREFQHKF1091
35Cyp c 1.01 17977825 7.81 2.2033 4.2721 40TPDDIKKAF48
36Lat c 1.0201 Q6ITU9_LATCA 7.86 2.1745 4.2541 40TSDDVKKAF48
37Thu a 1.0101 242253957 7.87 2.1669 4.2494 40TPEDIKKAF48
38Rho m 1.0101 Q870B9 7.88 2.1593 4.2446 429AGKDFHKAH437
39Fag e 1 29839419 7.90 2.1496 4.2386 181RGDQHQKIF189
40Fag e 1 2317674 7.90 2.1496 4.2386 154RGDQHQKIF162
41Fag e 1 2317670 7.90 2.1496 4.2386 211RGDQHQKIF219
42Gal d 6.0101 VIT1_CHICK 7.92 2.1382 4.2314 776IGRQWTKAL784
43gal d 6.0101 P87498 7.92 2.1382 4.2314 776IGRQWTKAL784
44Cuc ma 5.0101 2SS_CUCMA 8.08 2.0383 4.1690 114RGQEGRQML122
45The c 1 32363375 8.09 2.0285 4.1629 40SSDDVKKAF48
46Sal s 1 Q91483 8.09 2.0285 4.1629 38SSDDVKKAF46
47Sal s 1 5640137 8.09 2.0285 4.1629 39SSDDVKKAF47
48Bos d 13.0201 MYL3_BOVIN 8.10 2.0257 4.1611 54QIEEFKEAF62
49Lep d 5.0102 34495292 8.14 1.9994 4.1446 60NPDEFRNEF68
50Lep d 5.0103 34495294 8.14 1.9994 4.1446 58NPDEFRNEF66

Histogram for best protein-peptide similarity index
Number of windows: 1698
Average PD: 11.396335
Standard deviation: 1.627791
1 0.5 1
2 1.0 0
3 1.5 0
4 2.0 0
5 2.5 0
6 3.0 0
7 3.5 0
8 4.0 0
9 4.5 0
10 5.0 0
11 5.5 1
12 6.0 1
13 6.5 0
14 7.0 4
15 7.5 6
16 8.0 30
17 8.5 30
18 9.0 51
19 9.5 53
20 10.0 104
21 10.5 207
22 11.0 147
23 11.5 212
24 12.0 254
25 12.5 256
26 13.0 144
27 13.5 75
28 14.0 52
29 14.5 23
30 15.0 13
31 15.5 9
32 16.0 8
33 16.5 6
34 17.0 5
35 17.5 3
36 18.0 1
37 18.5 1
38 19.0 0
39 19.5 0
40 20.0 0
41 20.5 0
42 21.0 0
43 21.5 0
44 22.0 0

Histogram for all protein-peptide similarity indices
Number of windows: 400198
Average PD: 18.933624
Standard deviation: 2.603804
1 0.5 1
2 1.0 0
3 1.5 0
4 2.0 0
5 2.5 0
6 3.0 0
7 3.5 0
8 4.0 0
9 4.5 0
10 5.0 0
11 5.5 1
12 6.0 1
13 6.5 0
14 7.0 4
15 7.5 6
16 8.0 30
17 8.5 30
18 9.0 58
19 9.5 77
20 10.0 148
21 10.5 292
22 11.0 348
23 11.5 639
24 12.0 1028
25 12.5 1770
26 13.0 2509
27 13.5 3178
28 14.0 4539
29 14.5 6651
30 15.0 8071
31 15.5 11038
32 16.0 13230
33 16.5 16353
34 17.0 20012
35 17.5 22639
36 18.0 25757
37 18.5 27876
38 19.0 30303
39 19.5 29660
40 20.0 29864
41 20.5 28876
42 21.0 26668
43 21.5 22906
44 22.0 18983
45 22.5 15093
46 23.0 11198
47 23.5 8687
48 24.0 5700
49 24.5 3099
50 25.0 1647
51 25.5 875
52 26.0 258
53 26.5 84
Query sequence: RGREFRKAF

SDAP Home Page | Search SDAP | SDAP Manual | SDAP FAQ | Contact  
UTMB | Search | Directories | UTMB Map | News | Employment | Sitemap 
This site published by Ovidiu Ivanciuc
Copyright   2001-2021  The University of Texas Medical Branch. Please review our privacy policy and Internet guidelines.