The University of Texas Medical Branch
Department of Biochemistry and Molecular Biology Sealy Center for Structural Biology Computational Biology


SDAP Home Page
SDAP Overview

Use SDAP
SDAP All
SDAP Food

SDAP Tools
FAO/WHO Allergenicity Test
FASTA Search in SDAP
Peptide Match
Peptide Similarity
Peptide-Protein PD Index
Aller_ML, Allergen Markup Language
List SDAP

About SDAP
General Information
Manual
FAQ
Publications
Who Are We
Advisory Board

Allergy Links

Our Software Tools
MPACK
FANTOM
GETAREA
NOAH/DIAMOD
MASIA
PCPMer
InterProSurf
EpiSearch

Allergen Databases
WHO/IUIS Allergen Nomenclature database
FARRP Allergen Protein Database (University of Nebraska)
Allergen Database for Food Safety (ADFS)
COMPARE database
ALLFAM (Medical University of Vienna)
Allermatch (Wageninen University)

Protein Databases
PDB
MMDB - Entrez
SWISS-PROT
NCBI - Entrez
PIR

Protein Classification
CATH
CE
FSSP
iProClass
ProtoMap
SCOP
TOPS
VAST

Bioinformatics Servers
@TOME
BLAST @ NCBI
BLAST @ PIR
FASTA @ PIR
Peptide Match @ PIR
ClustalW @ BCM
ClustalW @ EMBL - EBI
ClustalW @ PIR

Bioinformatics Tools
Cn3D
MolMol

Bioinformatics Links
Bioinformatics Links Directory

SDAP - All Allergens
Go to: SDAP All allergens       Go to: SDAP Food allergens
Send a comment to Ovidiu Ivanciuc      Submit new allergen information to SDAP
Last Updated: Nov 1, 2021  
Alphabetical listing of allergens: A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
Access to SDAP is available free of charge for Academic and non-profit use.
Licenses for commercial use can be obtained by contacting W. Braun (webraun@utmb.edu).
Secure access to SDAP is available from https://fermi.utmb.edu/SDAP

Search Results: Peptide Similarity

Query peptide: RTGCNFDGA

NoAllergenLink to NCBI/
PIR/SwissProt
PD Sequence
Similarity
Index
z(PD,min)z(PD,all)Start
Residue
Matching regionEnd
Residue
1Act c 2 190358875 0.00 7.3941 7.6923 71RTGCNFDGA79
2Cap a 1 11321159 1.72 6.2761 6.9625 42RTNCNFDGA50
3Mus a 4.0101 88191901 2.55 5.7318 6.6071 47RTGCSFDGS55
4Lyc e NP24 P12670 2.71 5.6273 6.5389 69RTGCNFNAA77
5Cap a 1.0101 Q9ARG0_CAPAN 3.40 5.1810 6.2476 69RTNCNFDGS77
6Cap a 1w 16609959 3.40 5.1810 6.2476 69RTNCNFDGS77
7Jun a 3 P81295 4.94 4.1794 5.5937 73RTGCTFDAS81
8Jun v 3.010101 8843923 4.94 4.1794 5.5937 53RTGCTFDAS61
9Cup a 3 9929163 4.94 4.1794 5.5937 47RTGCTFDAS55
10Cup s 3.0102 38456228 4.94 4.1794 5.5937 73RTGCTFDAS81
11Jun v 3.010102 8843919 4.94 4.1794 5.5937 53RTGCTFDAS61
12Cup s 3.0101 38456226 4.94 4.1794 5.5937 73RTGCTFDAS81
13Ole e 13.0101 ALL13_OLEEU 5.81 3.6098 5.2219 71RTNCNFDAN79
14Ory s 1 8118423 6.76 2.9945 4.8202 160RVPCNFPGL168
15Pru av 2 P50694 6.83 2.9504 4.7914 77RTGCSTDAS85
16Ani s 14.0101 A0A0S3Q267_ANISI 6.95 2.8714 4.7399 120RVTCNINGG128
17Tri a ps93 4099919 7.03 2.8175 4.7046 160RVPCNFPGM168
18Pla or 2.0101 162949338 7.11 2.7643 4.6699 245VTGCTFTGT253
19Pan h 9.0101 XP_026775867 7.29 2.6496 4.5951 205KKGVNLPGA213
20Tri r 4.0101 5813788 7.37 2.5991 4.5621 279RTPQGIEGA287
21Blo t 4.0101 33667932 7.42 2.5624 4.5381 127QSGVGIDGT135
22Tri a ps93 4099919 7.56 2.4698 4.4777 23RSAVNYDTA31
23Pan h 10.0101 XP_026774991 7.65 2.4152 4.4420 161GSGTNLDSA169
24Cro s 1.0101 Q5EF31 7.73 2.3653 4.4094 62PTGMYINGA70
25Pru p 2.0201 190613907 7.78 2.3267 4.3843 100QVSCNGNGA108
26Pru p 2.0101 190613911 7.78 2.3267 4.3843 100QVSCNGNGA108
27Der f 36.0101 A0A291KZC2_DERFA 7.79 2.3244 4.3828 53RLNCNIHGQ61
28Ole e 14.0101 W8PPL3_OLEEU 7.85 2.2834 4.3560 119KSSWQFAGA127
29Cup s 3.0101 38456226 7.95 2.2165 4.3123 94QLSCTVSGA102
30Jun a 3 P81295 7.95 2.2165 4.3123 94QLSCTVSGA102
31Jun v 3.010102 8843919 7.95 2.2165 4.3123 74QLSCTVSGA82
32Cup a 3 9929163 7.95 2.2165 4.3123 68QLSCTVSGA76
33Jun v 3.010101 8843923 7.95 2.2165 4.3123 74QLSCTVSGA82
34Cup s 3.0102 38456228 7.95 2.2165 4.3123 94QLSCTVSGA102
35Sal k 6.0101 ARS33724 7.96 2.2106 4.3085 119PTGGTFDGQ127
36Sal k 6.0101 AHL24657 7.96 2.2106 4.3085 97PTGGTFDGQ105
37Ana o 3 24473800 7.97 2.2040 4.3042 129SQGCQFQSS137
38Per a 1.0103 2580504 8.00 2.1839 4.2911 119RRGVGVDGL127
39Aed a 1 P50635 8.08 2.1368 4.2603 95NAGDNFQGT103
40Der p 37.0101 AVD73319 8.10 2.1222 4.2508 88RGTCTFDPD96
41Der p 33.0101 QAT18644 8.12 2.1107 4.2433 239TASLRFDGA247
42Der f 33.0101 AIO08861 8.12 2.1107 4.2433 246TASLRFDGA254
43Pru du 8.0101 A0A516F3L2_PRUDU 8.13 2.0996 4.2360 230QEGCKIQGQ238
44Der f 6 P49276 8.17 2.0778 4.2218 226QSGCNGDSG234
45Ory s 1 8118430 8.17 2.0746 4.2197 162RVPCNYPGL170
46Per a 1.0103 2580504 8.20 2.0542 4.2064 307RRGVGINGL315
47Per a 1.0201 2231297 8.20 2.0542 4.2064 208RRGVGINGL216
48Per a 1.0101 4240399 8.20 2.0542 4.2064 143RRGVGINGL151
49Per a 1.0201 2231297 8.20 2.0542 4.2064 397RRGVGINGL405
50Per a 1.0104 2253610 8.20 2.0542 4.2064 186RRGVGINGL194

Histogram for best protein-peptide similarity index
Number of windows: 1698
Average PD: 11.358872
Standard deviation: 1.536203
1 0.5 1
2 1.0 0
3 1.5 0
4 2.0 1
5 2.5 0
6 3.0 2
7 3.5 2
8 4.0 0
9 4.5 0
10 5.0 6
11 5.5 0
12 6.0 1
13 6.5 0
14 7.0 3
15 7.5 5
16 8.0 9
17 8.5 27
18 9.0 26
19 9.5 75
20 10.0 131
21 10.5 118
22 11.0 190
23 11.5 286
24 12.0 234
25 12.5 268
26 13.0 159
27 13.5 69
28 14.0 40
29 14.5 21
30 15.0 10
31 15.5 5
32 16.0 3
33 16.5 2
34 17.0 1
35 17.5 1
36 18.0 0

Histogram for all protein-peptide similarity indices
Number of windows: 400198
Average PD: 18.101824
Standard deviation: 2.353238
1 0.5 1
2 1.0 0
3 1.5 0
4 2.0 1
5 2.5 0
6 3.0 2
7 3.5 2
8 4.0 0
9 4.5 0
10 5.0 6
11 5.5 0
12 6.0 1
13 6.5 0
14 7.0 3
15 7.5 5
16 8.0 16
17 8.5 30
18 9.0 29
19 9.5 87
20 10.0 172
21 10.5 187
22 11.0 456
23 11.5 760
24 12.0 1187
25 12.5 2047
26 13.0 2881
27 13.5 4546
28 14.0 6985
29 14.5 9216
30 15.0 11943
31 15.5 15161
32 16.0 19365
33 16.5 22404
34 17.0 26657
35 17.5 29853
36 18.0 31685
37 18.5 33012
38 19.0 33418
39 19.5 31795
40 20.0 28778
41 20.5 25297
42 21.0 20690
43 21.5 15148
44 22.0 10627
45 22.5 7428
46 23.0 4255
47 23.5 2308
48 24.0 1059
49 24.5 513
50 25.0 127
51 25.5 43
52 26.0 11
Query sequence: RTGCNFDGA

SDAP Home Page | Search SDAP | SDAP Manual | SDAP FAQ | Contact  
UTMB | Search | Directories | UTMB Map | News | Employment | Sitemap 
This site published by Ovidiu Ivanciuc
Copyright   2001-2021  The University of Texas Medical Branch. Please review our privacy policy and Internet guidelines.