The University of Texas Medical Branch
Department of Biochemistry and Molecular Biology Sealy Center for Structural Biology Computational Biology


SDAP Home Page
SDAP Overview

Use SDAP
SDAP All
SDAP Food

SDAP Tools
FAO/WHO Allergenicity Test
FASTA Search in SDAP
Peptide Match
Peptide Similarity
Peptide-Protein PD Index
Aller_ML, Allergen Markup Language
List SDAP

About SDAP
General Information
Manual
FAQ
Publications
Who Are We
Advisory Board

Allergy Links

Our Software Tools
MPACK
FANTOM
GETAREA
NOAH/DIAMOD
MASIA
PCPMer
InterProSurf
EpiSearch

Allergen Databases
WHO/IUIS Allergen Nomenclature database
FARRP Allergen Protein Database (University of Nebraska)
Allergen Database for Food Safety (ADFS)
COMPARE database
ALLFAM (Medical University of Vienna)
Allermatch (Wageninen University)

Protein Databases
PDB
MMDB - Entrez
SWISS-PROT
NCBI - Entrez
PIR

Protein Classification
CATH
CE
FSSP
iProClass
ProtoMap
SCOP
TOPS
VAST

Bioinformatics Servers
@TOME
BLAST @ NCBI
BLAST @ PIR
FASTA @ PIR
Peptide Match @ PIR
ClustalW @ BCM
ClustalW @ EMBL - EBI
ClustalW @ PIR

Bioinformatics Tools
Cn3D
MolMol

Bioinformatics Links
Bioinformatics Links Directory

SDAP - All Allergens
Go to: SDAP All allergens       Go to: SDAP Food allergens
Send a comment to Ovidiu Ivanciuc      Submit new allergen information to SDAP
Last Updated: Nov 1, 2021  
Alphabetical listing of allergens: A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
Access to SDAP is available free of charge for Academic and non-profit use.
Licenses for commercial use can be obtained by contacting W. Braun (webraun@utmb.edu).
Secure access to SDAP is available from https://fermi.utmb.edu/SDAP

Search Results: Peptide Similarity

Query peptide: VRTCTQGQQ

NoAllergenLink to NCBI/
PIR/SwissProt
PD Sequence
Similarity
Index
z(PD,min)z(PD,all)Start
Residue
Matching regionEnd
Residue
1Pru du 8.0101 A0A516F3L2_PRUDU 0.00 7.8174 7.5427 140VRTCTQGQQ148
2Tri r 2.0101 5813790 4.76 4.2459 5.3907 118VRTTTNGTN126
3Tri a glutenin 170743 5.76 3.4914 4.9361 569LQQPTQGQQ577
4Tri a glutenin 170743 5.76 3.4914 4.9361 185LQQPTQGQQ193
5Tri a glutenin 21743 5.76 3.4914 4.9361 584LQQPTQGQQ592
6Tri a glutenin 21743 5.76 3.4914 4.9361 191LQQPTQGQQ199
7Tri a glutenin 21743 5.84 3.4329 4.9009 209LRQGQQGQQ217
8Tri a glutenin 170743 5.84 3.4329 4.9009 203LRQGQQGQQ211
9Ory s 1 6069656 6.00 3.3147 4.8297 186VRFCLQGNH194
10Per a 1.0201 2231297 6.23 3.1381 4.7232 293LRTLSSGQR301
11Tri a 26.0101 P10388 6.43 2.9917 4.6350 780LQQTGQGQQ788
12Tri a glutenin 736319 6.43 2.9917 4.6350 779LQQTGQGQQ787
13Tri a glutenin 32968199 6.43 2.9917 4.6350 780LQQTGQGQQ788
14Tri a glutenin 21751 6.43 2.9885 4.6331 571VQQPGQGQQ579
15Tri a glutenin 21751 6.43 2.9885 4.6331 556VQQPGQGQQ564
16Tri a glutenin 22090 6.43 2.9885 4.6331 613VQQPGQGQQ621
17Tri a glutenin 21779 6.43 2.9885 4.6331 568VQQPGQGQQ576
18Tri a glutenin 22090 6.50 2.9416 4.6048 407LQQVGQGQQ415
19Tri a glutenin 886965 6.62 2.8483 4.5486 238VQGVSQPQQ246
20Tri a glutenin 886967 6.62 2.8483 4.5486 253VQGVSQPQQ261
21Tri a glutenin 170743 6.80 2.7157 4.4687 230LQQLAQGQQ238
22Tri a glutenin 21743 6.80 2.7157 4.4687 236LQQLAQGQQ244
23Tri a glutenin 22090 6.83 2.6889 4.4526 628LQQSGQGQQ636
24Tri a glutenin 21743 6.83 2.6889 4.4526 632LQQSGQGQQ640
25Tri a glutenin 170743 6.83 2.6889 4.4526 617LQQSGQGQQ625
26Sin a 2.0101 Q2TLW0 6.87 2.6636 4.4373 391ILYCTQGQA399
27Tri a glutenin 21779 6.98 2.5760 4.3846 384LQQLGQGQQ392
28Tri a glutenin 21751 6.98 2.5760 4.3846 374LQQLGQGQQ382
29Sol g 4.0201 7638030 7.12 2.4767 4.3247 36IRTVPKGEN44
30Sol g 4.0101 Q9NH75 7.12 2.4767 4.3247 36IRTVPKGEN44
31Pen ch 18 7963902 7.19 2.4193 4.2901 133VRTMSEGSV141
32Tri a 26.0101 P10388 7.23 2.3902 4.2726 555LQQPAQGQQ563
33Tri a glutenin 21743 7.23 2.3902 4.2726 485LQQPAQGQQ493
34Tri a 26.0101 P10388 7.23 2.3902 4.2726 321LQQPAQGQQ329
35Tri a glutenin 736319 7.23 2.3902 4.2726 326LQQPAQGQQ334
36Tri a glutenin 170743 7.23 2.3902 4.2726 479LQQPAQGQQ487
37Tri a glutenin 32968199 7.23 2.3902 4.2726 555LQQPAQGQQ563
38Tri a glutenin 736319 7.23 2.3902 4.2726 560LQQPAQGQQ568
39Tri a 26.0101 P10388 7.23 2.3902 4.2726 179LQQPAQGQQ187
40Tri a 26.0101 P10388 7.23 2.3902 4.2726 216LQQPAQGQQ224
41Tri a glutenin 736319 7.23 2.3902 4.2726 221LQQPAQGQQ229
42Tri a glutenin 32968199 7.23 2.3902 4.2726 321LQQPAQGQQ329
43Tri a glutenin 32968199 7.23 2.3902 4.2726 216LQQPAQGQQ224
44Tri a glutenin 736319 7.23 2.3902 4.2726 184LQQPAQGQQ192
45Tri a glutenin 32968199 7.23 2.3902 4.2726 179LQQPAQGQQ187
46Ory s 1 Q40638 7.26 2.3708 4.2609 231VRVTTEGAR239
47Bra r 1 Q42473 7.31 2.3272 4.2346 132VRQQGQQQQ140
48Tri a glutenin 22090 7.36 2.2899 4.2122 173LHQSGQGQQ181
49Tri a glutenin 21751 7.42 2.2505 4.1884 194LQQPGQGQQ202
50Tri a glutenin 21779 7.42 2.2505 4.1884 432LQQPGQGQQ440

Histogram for best protein-peptide similarity index
Number of windows: 1698
Average PD: 10.415398
Standard deviation: 1.332341
1 0.5 1
2 1.0 0
3 1.5 0
4 2.0 0
5 2.5 0
6 3.0 0
7 3.5 0
8 4.0 0
9 4.5 0
10 5.0 1
11 5.5 0
12 6.0 3
13 6.5 7
14 7.0 3
15 7.5 5
16 8.0 31
17 8.5 56
18 9.0 85
19 9.5 160
20 10.0 282
21 10.5 288
22 11.0 266
23 11.5 185
24 12.0 118
25 12.5 135
26 13.0 36
27 13.5 11
28 14.0 8
29 14.5 7
30 15.0 3
31 15.5 3
32 16.0 0
33 16.5 3

Histogram for all protein-peptide similarity indices
Number of windows: 400198
Average PD: 16.678537
Standard deviation: 2.211229
1 0.5 1
2 1.0 0
3 1.5 0
4 2.0 0
5 2.5 0
6 3.0 0
7 3.5 0
8 4.0 0
9 4.5 0
10 5.0 1
11 5.5 0
12 6.0 7
13 6.5 9
14 7.0 10
15 7.5 39
16 8.0 46
17 8.5 90
18 9.0 223
19 9.5 342
20 10.0 562
21 10.5 1158
22 11.0 1348
23 11.5 2530
24 12.0 3396
25 12.5 5286
26 13.0 7968
27 13.5 10534
28 14.0 13702
29 14.5 17870
30 15.0 22623
31 15.5 26671
32 16.0 30314
33 16.5 33564
34 17.0 34711
35 17.5 36107
36 18.0 34605
37 18.5 31754
38 19.0 26989
39 19.5 21019
40 20.0 15117
41 20.5 9813
42 21.0 5985
43 21.5 3343
44 22.0 1630
45 22.5 586
46 23.0 177
Query sequence: VRTCTQGQQ

SDAP Home Page | Search SDAP | SDAP Manual | SDAP FAQ | Contact  
UTMB | Search | Directories | UTMB Map | News | Employment | Sitemap 
This site published by Ovidiu Ivanciuc
Copyright   2001-2021  The University of Texas Medical Branch. Please review our privacy policy and Internet guidelines.