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Department of Biochemistry and Molecular Biology Sealy Center for Structural Biology Computational Biology

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SDAP - All Allergens
Go to: SDAP All allergens       Go to: SDAP Food allergens
Send a comment to Ovidiu Ivanciuc      Submit new allergen information to SDAP
Last Updated: February 25, 2013  
Alphabetical listing of allergens: A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
Access to SDAP is available free of charge for Academic and non-profit use.
Licenses for commercial use can be obtained by contacting W. Braun (webraun@utmb.edu).
Secure access to SDAP is available from https://fermi.utmb.edu/SDAP

Allergen Car b 1

Translate to AllerML
AllergenCar b 1
Typetree
Species - Systematic NameFagales; Carpinus betulus
Species - Common Namehornbeam
Keywordshomolog: pathogenesis related protein PR10
ClassIUIS

Car b 1 - PubMedReference
Reference 1Larsen JN, Stroman P, Ipsen H. PCR based cloning and sequencing of isogenes encoding the tree pollen major allergen Car b I from Carpinus betulus, hornbeam. Mol Immunol. 1992 Jun;29(6):703-11.

Car b 1 - Isoallergens
NoIsoallergen
1Car b 1.0101
2Car b 1.0102
3Car b 1.0103
4Car b 1.0104
5Car b 1.0105
6Car b 1.0106
7Car b 1.0106
8Car b 1.0106
9Car b 1.0106
10Car b 1.0107
11Car b 1.0107
12Car b 1.0108
13Car b 1.0109
14Car b 1.0110
15Car b 1.0111
16Car b 1.0112
17Car b 1.0113
18Car b 1.0201
19Car b 1.0301
20Car b 1.0302

Car b 1 - Protein Sequences
SourceLink to SourceView SequenceFASTA@SDAPBLAST@NCBIBLAST@ExPASyPROSITE@PIR
SwissProtP38949Go!Go!Go!Go!Go!
SwissProtP38950Go!Go!Go!Go!Go!
FASTA@SDAP: FASTA search against all SDAP allergen sequences performed at SDAP
BLAST@ExPASy: BLAST search performed at the Expert Protein Analysis System (ExPASy) proteomics server of the Swiss Institute of Bioinformatics (SIB)
PROSITE@PIR: PROSITE search performed at PIR - Protein Information Resources

Car b 1 - Protein Sequence Properties
Protein SequenceProtease cleavage sites
PeptideCutter@ExPASy
P38949Go!
P38950Go!
PeptideCutter@ExPASy: Protease cleavage sites predicted with PeptideCutter from the Expert Protein Analysis System (ExPASy) proteomics server of the Swiss Institute of Bioinformatics (SIB)

Car b 1 - Protein Similarity, Classification and Clustering
Protein SequenceSuperfamilyInterPro
P38949Go!Go!
P38950Go!Go!

Car b 1 - Protein Models
3D ModelSourceLink to SourceView SequenceView AlignmentGet ModelPicturePicture+90Picture+180Picture+270Jmol
Model 84SwissProtP38949Go!Go!Go!Go!Go!Go!Go!View!
Model 85SwissProtP38950Go!Go!Go!Go!Go!Go!Go!View!


Car b 1 - Pfam domains
SequencePfam sequencePfam familyAllergens from
this Pfam family
Pfam databasePfam regionFirst amino acidLast amino acid
P38949       
 MPA1_CARBEPF00407Go!Pfam A11154
  PF00407: Pathogenesis-related protein Bet v I family
P38950       
 MPA2_CARBEPF00407Go!Pfam A11154
  PF00407: Pathogenesis-related protein Bet v I family
Pfam is a database of multiple sequence alignments and hidden Markov models covering protein domains and families

Inspect MotifMate results for Car b 1. AutoMotif contains a database of PCPMer motifs for allergens.
MotifMate home page
MotifMate summary
Browse MotifMate proteins
Browse MotifMate families


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