
SDAP Home Page
SDAP Overview
SDAP All
SDAP Food
Use SDAP All
Search SDAP
List SDAP
SDAP Tools
FAO/WHO Allergenicity Test
FASTA Search in SDAP
Peptide Match
Peptide Similarity
Peptide-Protein PD Index
About SDAP
General Information
Current Version
Manual
FAQ
Publications
Who Are We
Allergy Links
l, Helvetica, Verdana, sans-serif" SIZE="2">Protein Classification
CATH
CE
FSSP
iProClass
ProtoMap
SCOP
TOPS
VAST
Bioinformatics Servers
@TOME
BLAST @ NCBI
BLAST @ PIR
FASTA @ PIR
Peptide Match @ PIR
ClustalW @ BCM
ClustalW @ EMBL - EBI
ClustalW @ PIR
Bioinformatics Tools
Cn3D
MolMol
Bioinformatics Links
Bioinformatics Links Directory
|
SDAP - All Allergens
Allergen Jun a 1| Allergen | Jun a 1 | | Type | tree | | Species - Systematic Name | Pinales; Juniperus ashei | | Species - Common Name | mountain cedar | | Keywords | pectate lyase
| | Class | IUIS |
| Jun a 1 - PubMed | Reference | | Reference 1 | Midoro-Horiuti T, Goldblum RM, Kurosky A, Wood TG, Schein CH, Brooks EG, Molecular cloning of the mountain cedar (Juniperus ashei) pollen major allergen, Jun a 1. J Allergy Clin Immunol. 1999 Sep;104(3 Pt 1):613-7. | | Reference 2 | Midoro-Horiuti T, Goldblum RM, Kurosky A, Goetz DW, Brooks EG, Isolation and characterization of the mountain cedar (Juniperus ashei) pollen major allergen, Jun a 1. J Allergy Clin Immunol. 1999 Sep;104(3 Pt 1):608-12. | | Reference 3 | Midoro-Horiuti T, Mathura V, Schein CH, Braun W, Yu S, Watanabe M, Lee JC, Brooks EG, Goldblum RM. Major linear IgE epitopes of mountain cedar pollen allergen Jun a 1 map to the pectate lyase catalytic site. Mol Immunol. 2003 Dec;40(8):555-62. |
Jun a 1 - Protein Sequences FASTA@SDAP: FASTA search against all SDAP allergen sequences performed at SDAP BLAST@ExPASy: BLAST search performed at the Expert Protein Analysis System (ExPASy) proteomics server of the Swiss Institute of Bioinformatics (SIB) BLAST@PIR: BLAST search performed at PIR - Protein Information Resources FASTA@PIR: FASTA search performed at PIR - Protein Information Resources PROSITE@PIR: PROSITE search performed at PIR - Protein Information Resources
Jun a 1 - Protein Models Inspect MotifMate results for Jun a 1. AutoMotif contains a database of PCPMer motifs for allergens. MotifMate home page MotifMate summary Browse MotifMate proteins Browse MotifMate families
Jun a 1 - Pfam domains
| Sequence | Pfam sequence | Pfam family | Allergens from this Pfam family | Pfam database | Pfam region | First amino acid | Last amino acid | | P81294 | | | | | | | | | | MPA1_JUNAS | PF00544 | Go! | Pfam A | 1 | 102 | 289 | | | | PF00544: Pectate lyase
| Pfam is a database of multiple sequence alignments and hidden Markov models covering protein domains and families
Jun a 1 - PDB Structures
| PDB Accession | WebMol | AstexViewer | Chime | Deposition date | Experimental | Observation | | 1PXZ | View! | View! | View! | 07-JUL-03 | X-ray diffraction resolution 1.70 A | |
Jun a 1 - Epitopes| No | Epitope | Exact Match @SDAP | Peptide Similarity @SDAP | Exact Match @PIR | Position | Type | Description | | 1 | IFSQNMNIKLKMP | Go! | Go! | Go! | 92-104 | IgE |
| | 2 | AFNQFGPNAGQR | Go! | Go! | Go! | 239-250 | IgE |
| | 3 | MPRARYGL | Go! | Go! | Go! | 251-258 | IgE |
| | 4 | WRSTRDAFING | Go! | Go! | Go! | 317-327 | IgE |
| T. Midoro-Horiuti, V. Mathura, C. H. Schein, W. Braun, S. Yu, M. Watanabe, J. C. Lee,
E. G. Brooks, and R. M. Goldblum,
Major linear IgE epitopes of mountain cedar pollen allergen Jun a 1 map to the pectate
lyase catalytic site,
Mol. Immunol. 2003, 40, 555-562.
|