The University of Texas Medical Branch
Department of Biochemistry and Molecular Biology Sealy Center for Structural Biology Computational Biology

SDAP Home Page
SDAP Overview
SDAP All
SDAP Food

Use SDAP All
Search SDAP
List SDAP

SDAP Tools
FAO/WHO Allergenicity Test
FASTA Search in SDAP
Peptide Match
Peptide Similarity
Peptide-Protein PD Index

About SDAP
General Information
Current Version
Manual
FAQ
Publications
Who Are We

Allergy Links l, Helvetica, Verdana, sans-serif" SIZE="2">Protein Classification
CATH
CE
FSSP
iProClass
ProtoMap
SCOP
TOPS
VAST

Bioinformatics Servers
@TOME
BLAST @ NCBI
BLAST @ PIR
FASTA @ PIR
Peptide Match @ PIR
ClustalW @ BCM
ClustalW @ EMBL - EBI
ClustalW @ PIR

Bioinformatics Tools
Cn3D
MolMol

Bioinformatics Links
Bioinformatics Links Directory

SDAP - All Allergens
Go to: SDAP All allergens       Go to: SDAP Food allergens
Send a comment to Ovidiu Ivanciuc      Register for the SDAP Newsletter
Alphabetical listing of allergens: A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

Allergen Jun a 1

AllergenJun a 1
Typetree
Species - Systematic NamePinales; Juniperus ashei
Species - Common Namemountain cedar
Keywordspectate lyase
ClassIUIS

Jun a 1 - PubMedReference
Reference 1Midoro-Horiuti T, Goldblum RM, Kurosky A, Wood TG, Schein CH, Brooks EG, Molecular cloning of the mountain cedar (Juniperus ashei) pollen major allergen, Jun a 1. J Allergy Clin Immunol. 1999 Sep;104(3 Pt 1):613-7.
Reference 2Midoro-Horiuti T, Goldblum RM, Kurosky A, Goetz DW, Brooks EG, Isolation and characterization of the mountain cedar (Juniperus ashei) pollen major allergen, Jun a 1. J Allergy Clin Immunol. 1999 Sep;104(3 Pt 1):608-12.
Reference 3Midoro-Horiuti T, Mathura V, Schein CH, Braun W, Yu S, Watanabe M, Lee JC, Brooks EG, Goldblum RM. Major linear IgE epitopes of mountain cedar pollen allergen Jun a 1 map to the pectate lyase catalytic site. Mol Immunol. 2003 Dec;40(8):555-62.

Jun a 1 - Protein Sequences
SourceLink to SourceView SequenceFASTA@SDAPBLAST@NCBIBLAST@ExPASyBLAST@PIRFASTA@PIRPROSITE@PIR
SwissProtP81294Go!Go!Go!Go!Go!Go!Go!
FASTA@SDAP: FASTA search against all SDAP allergen sequences performed at SDAP
BLAST@ExPASy: BLAST search performed at the Expert Protein Analysis System (ExPASy) proteomics server of the Swiss Institute of Bioinformatics (SIB)
BLAST@PIR: BLAST search performed at PIR - Protein Information Resources
FASTA@PIR: FASTA search performed at PIR - Protein Information Resources
PROSITE@PIR: PROSITE search performed at PIR - Protein Information Resources

Jun a 1 - Protein Models
SourceLink to SourceView SequenceView AlignmentGet ModelPicturePicture+90Picture+180Picture+270JmolAstexViewer
SwissProtP81294Go!Go!Go!Go!Go!Go!Go!View!View!
Inspect MotifMate results for Jun a 1. AutoMotif contains a database of PCPMer motifs for allergens.
MotifMate home page
MotifMate summary
Browse MotifMate proteins
Browse MotifMate families

Jun a 1 - Pfam domains
SequencePfam sequencePfam familyAllergens from
this Pfam family
Pfam databasePfam regionFirst amino acidLast amino acid
P81294       
 MPA1_JUNASPF00544Go!Pfam A1102289
  PF00544: Pectate lyase
Pfam is a database of multiple sequence alignments and hidden Markov models covering protein domains and families

Jun a 1 - PDB Structures
PDB AccessionWebMolAstexViewerChimeDeposition dateExperimentalObservation
1PXZView!View!View!07-JUL-03X-ray diffraction resolution 1.70 A 

Jun a 1 - Epitopes
NoEpitopeExact
Match
@SDAP
Peptide
Similarity
@SDAP
Exact
Match
@PIR
PositionTypeDescription
1IFSQNMNIKLKMPGo!Go!Go!92-104IgE 
2AFNQFGPNAGQRGo!Go!Go!239-250IgE 
3MPRARYGLGo!Go!Go!251-258IgE 
4WRSTRDAFINGGo!Go!Go!317-327IgE 
T. Midoro-Horiuti, V. Mathura, C. H. Schein, W. Braun, S. Yu, M. Watanabe, J. C. Lee, E. G. Brooks, and R. M. Goldblum, Major linear IgE epitopes of mountain cedar pollen allergen Jun a 1 map to the pectate lyase catalytic site, Mol. Immunol. 2003, 40, 555-562.

Last Modified: June 25, 2009


SDAP Home Page | Search SDAP | SDAP Manual | SDAP FAQ | Contact  
UTMB | Search | Directories | Toolbox | News | Employment | Sitemap 
UT System | Reports to the State | Compact With Texans | Statewide Search
 
This site published by Ovidiu Ivanciuc
Copyright   2001-2009  The University of Texas Medical Branch. Please review our privacy policy and Internet guidelines.