SDAP Home Page
SDAP Overview
SDAP All
SDAP Food
Use SDAP All
Search SDAP All
List SDAP All
SDAP Food
SDAP Tools
FAO/WHO Allergenicity Test
FASTA Search in SDAP
Peptide Match
Peptide Similarity
Peptide-Protein PD Index
Aller_ML, Allergen Markup Language
List SDAP
About SDAP
General Information
Manual
FAQ
Publications
Who Are We
Advisory Board
Allergy Links
Our Software Tools
MPACK
FANTOM
GETAREA
NOAH/DIAMOD
MASIA
PCPMer
InterProSurf
EpiSearch
Protein Databases
PDB
MMDB - Entrez
SWISS-PROT
NCBI - Entrez
PIR
Protein Classification
CATH
CE
FSSP
iProClass
ProtoMap
SCOP
TOPS
VAST
Bioinformatics Servers
@TOME
BLAST @ NCBI
BLAST @ PIR
FASTA @ PIR
Peptide Match @ PIR
ClustalW @ BCM
ClustalW @ EMBL - EBI
ClustalW @ PIR
Bioinformatics Tools
Cn3D
MolMol
Bioinformatics Links
Bioinformatics Links Directory
|
SDAP - All Allergens
Full FASTA alignment
Sequence name: Query sequence: DRCIWPKEGFSIYWNIPTHFCHNFGVYFKEL
Alignment made with FASTA 3.45 As explained in the FASTA manual, the bit score is equivalent to the bit score reported by BLAST. A 1 bit increase in score corresponds to a 2-fold reduction in expectation, and a 10-bit increase implies 1000-fold lower expectation. Sequences with E values < 0.01 are almost always homologous.
Alignment 1 Sequence 1: Sequence 2: Allergen Ves m 2.0101, Sequence: 6736487 Sequence identity: 100.00 (31/31) Sequence 1 DRCIWPKEGFSIYWNIPTHFCHNFGVYFKEL DRCIWPKEGFSIYWNIPTHFCHNFGVYFKEL Sequence 2 DRCIWPKEGFSIYWNIPTHFCHNFGVYFKEL
Alignment 2 Sequence 1: Sequence 2: Allergen Ves v 2.0201, Sequence: AAX14718 Sequence identity: 93.55 (29/31) Sequence 1 DRCIWPKEGFSIYWNIPTHFCHNFGVYFKEL------------------- DR-IWPK-GFSIYWNIPTHFCHNFGVYFKEL------------------- Sequence 2 DRTIWPKKGFSIYWNIPTHFCHNFGVYFKELKQFNIKYNSMNNFRGETIS
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 LFYDPGNFPSMVLLKNGTYEIRNEGVPQKGNLTIHLEQFTKELDEIYPKK
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 IAGGIGVIHFHNWRPIFRRNVDNLKINKDISIDLVRKEHPKWDKSMIEKE
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 ASNRFETSAKIFMEKTLKLAKEIRKKTEWGYHGYPHCLSGSTDKPSFDCD
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 ALSMSENDKMSWLFNNQNVLLPSIYLKNVLKPDEKIHLVQERLKEAIRIS
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 KNFKHLPKVLPYWWYTYQDKESIFLTEADVKNTFKEILTNGADGIIIWGV
Sequence 1 ---------------------------------------- ---------------------------------------- Sequence 2 SYELTDRKRCEKLKEYLMKILGPIAFKVTKAVKENTPLNF
Alignment 3 Sequence 1: Sequence 2: Allergen Pol d 2.0101, Sequence: XP_015179722 Sequence identity: 58.06 (18/31) Sequence 1 -----------------DRCIW-------PKEGFSIYWNIPTHFCHNFGV -----------------D-C-W-------PK--FSIYWN-PT--CH--G- Sequence 2 MLLVTFLLFFLHPLVNGDSCGWNCESSKRPKRVFSIYWNVPTFMCHQYGM
Sequence 1 YFKEL--------------------------------------------- -F-E---------------------------------------------- Sequence 2 NFDEVTDFNIKHNSKDNFRGETIAIYYDPGKFPALMPLNNNGKYEERNGG
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 VPQLGNITIHLQQFNEDLDKMTPDRNFGGIGVIDFERWRPIFRQNWGNTE
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 IHKKYSIELVRKEHPKWSESMIEAEATKKFEKYARYFMEETLKLAKKSRK
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 RAKWGYYGFPYCYNVTPNNPGPDCDAKAIIENDRLSWMYNNQEILLPSVY
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 LRHEQKPEERIYLVQGRIKEAVRISNNLEHSPSVLAYWWYVYQDKMDIYL
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 SETDVKKTFQEIVTNGGNGIIIWGSSSDVNSLSKCKRLREYLLNTLGPIA
Sequence 1 --------------- --------------- Sequence 2 VNVTETVNGRSSLNF
Alignment 4 Sequence 1: Sequence 2: Allergen Dol m 2, Sequence: P49371 Sequence identity: 48.39 (15/31) Sequence 1 DRCIWPKEGFSIYWNIPTHFCHNFGVYFKEL------------------- -----PK--F-IYWN-PT--CH--G-YF-E-------------------- Sequence 2 --SERPKRVFNIYWNVPTFMCHQYGLYFDEVTNFNIKHNSKDDFQGDKIS
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 IFYDPGEFPALLPLKEGNYKIRNGGVPQEGNITIHLQRFIENLDKTYPNR
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 NFNGIGVIDFERWRPIFRQNWGNMMIHKKFSIDLVRNEHPFWDKKMIELE
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 ASKRFEKYARLFMEETLKLAKKTRKQADWGYYGYPYCFNMSPNNLVPDCD
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 ATAMLENDKMSWLFNNQNVLLPSVYIRHELTPDQRVGLVQGRVKEAVRIS
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 NNLKHSPKVLSYWWYVYQDDTNTFLTETDVKKTFQEIAINGGDGIIIWGS
Sequence 1 --------------------------------- --------------------------------- Sequence 2 SSDVNSLSKCKRLREYLLTVLGPITVNVTETVN
Alignment 5 Sequence 1: Sequence 2: Allergen Pol a 2, Sequence: Q9U6V9 Sequence identity: 51.61 (16/31) Sequence 1 ---------------------------DRCIWPKEGFSIYWNIPTHFCHN ----------------------------R---PK--FSIYWN-PT--CH- Sequence 2 YVSLSPDSVFNIITDDISHQILSRSNCERSKRPKRVFSIYWNVPTFMCHQ
Sequence 1 FGVYFKEL------------------------------------------ -G--F-E------------------------------------------- Sequence 2 YGMNFDEVTDFNIKHNSKDNFRGETISIYYDPGKFPALMPLKNGNYEERN
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 GGVPQRGNITIHLQQFNEDLDKMTPDKNFGGIGVIDFERWKPIFRQNWGN
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 TEIHKKYSIELVRKEHPKWSESMIEAEATKKFEKYARYFMEETLKLAKKT
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 RKRAKWGYYGFPYCYNVTPNNPGPDCDAKATIENDRLSWMYNNQEILFPS
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 VYVRHEQKPEERVYLVQGRIKEAVRISNNLEHSPSVLAYWWYVYQDKMDI
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 YLSETDVEKTFQEIVTNGGDGIIIWGSSSDVNSLSKCKRLREYLLNTLGP
Sequence 1 ----------------- ----------------- Sequence 2 FAVNVTETVNGRSSLNF
Alignment 6 Sequence 1: Sequence 2: Allergen Ves v 2.0101, Sequence: P49370 Sequence identity: 45.16 (14/31) Sequence 1 DRCIWPKEGFSIYWNIPTHFCHNFGVYFKEL------------------- -----PK--F-IYWN-PT--CH----YF-E-------------------- Sequence 2 --SERPKRVFNIYWNVPTFMCHQYDLYFDEVTNFNIKRNSKDDFQGDKIA
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 IFYDPGEFPALLSLKDGKYKKRNGGVPQEGNITIHLQKFIENLDKIYPNR
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 NFSGIGVIDFERWRPIFRQNWGNMKIHKNFSIDLVRNEHPTWNKKMIELE
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 ASKRFEKYARFFMEETLKLAKKTRKQADWGYYGYPYCFNMSPNNLVPECD
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 VTAMHENDKMSWLFNNQNVLLPSVYVRQELTPDQRIGLVQGRVKEAVRIS
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 NNLKHSPKVLSYWWYVYQDETNTFLTETDVKKTFQEIVINGGDGIIIWGS
Sequence 1 --------------------------------- --------------------------------- Sequence 2 SSDVNSLSKCKRLQDYLLTVLGPIAINVTEAVN
Alignment 7 Sequence 1: Sequence 2: Allergen Api m 2, Sequence: Q08169 Sequence identity: 35.48 (11/31) Sequence 1 ---------------------------------DRCIWPKEGFSIYWNIP ------------------------------------------F--YWN-P Sequence 2 MSRPLVITEGMMIGVLLMLAPINALLLGFVQSTPDNNKTVREFNVYWNVP
Sequence 1 THFCHNFGVYFKEL------------------------------------ T--CH--G--F-E------------------------------------- Sequence 2 TFMCHKYGLRFEEVSEKYGILQNWMDKFRGEEIAILYDPGMFPALLKDPN
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 GNVVARNGGVPQLGNLTKHLQVFRDHLINQIPDKSFPGVGVIDFESWRPI
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 FRQNWASLQPYKKLSVEVVRREHPFWDDQRVEQEAKRRFEKYGQLFMEET
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 LKAAKRMRPAANWGYYAYPYCYNLTPNQPSAQCEATTMQENDKMSWLFES
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 EDVLLPSVYLRWNLTSGERVGLVGGRVKEALRIARQMTTSRKKVLPYYWY
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 KYQDRRDTDLSRADLEATLRKITDLGADGFIIWGSSDDINTKAKCLQFRE
Sequence 1 -------------------------------- -------------------------------- Sequence 2 YLNNELGPAVKRIALNNNANDRLTVDVSVDQV
Alignment 8 Sequence 1: Sequence 2: Allergen Tab y 2.0101, Sequence: ADM18346 Sequence identity: 35.48 (11/31) Sequence 1 ----------------DRCIWPKEGFSIYWNIPTHFCHNFGVYFKEL--- ------------------CI-----F--YWNIPT--C---------L--- Sequence 2 MKLHQGLVCLSVLILLPTCILGDRKFEVYWNIPTFMCPDQNKTIMDLNKK
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 HGVIQNTEDLFRGDKISLLYHPGAFPAITRNKTTNTLIYENGGVPQAGNL
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 SLHLKLLEKDINEQITDKNFSGLAVIDFELWRPIFRQNGGSLSDYQNLSL
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 KLEKDLHPEFNEDQLRKEAERRIEKFGRSFIKQTLIKAKKLRPKAQWGYY
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 AFPYCFNGRRRYVDTCIPSAKIDNDRILYMFENSDVIYPAVYLQTDLAQK
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 NQTGLVKGRVDEAVRMAKMVKKPAKPPVLVYHRYVFTDTLEYISKENTTA
Sequence 1 ------------------------------------------------- ------------------------------------------------- Sequence 2 VFKAMKDNGADGVIIWGSSFDLNSKEKCAKFLDYLREVLWPVIDEVKRS
|